RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 DPY19L2P1Q6NXN4 242 aa10.9□□□□□ -0.66
SHMT2-215ENST00000554656 TRIM65Q6PJ69 517 aa10.9□□□□□ -0.66
SHMT2-215ENST00000554656 CCDC170Q8IYT3 715 aa10.9□□□□□ -0.66
SHMT2-215ENST00000554656 WDTC1Q8N5D0 677 aa10.9□□□□□ -0.66
SHMT2-215ENST00000554656 GANCQ8TET4 914 aa10.9□□□□□ -0.66
SHMT2-215ENST00000554656 FRS2Q8WU20 508 aa10.9□□□□□ -0.66
SHMT2-215ENST00000554656 CPLX3Q8WVH0 158 aa10.9□□□□□ -0.66
SHMT2-215ENST00000554656 BAP1Q92560 729 aa10.9□□□□□ -0.66
SHMT2-215ENST00000554656 BTN2A3PQ96KV6 586 aa10.9□□□□□ -0.66
SHMT2-215ENST00000554656 SLC2A13Q96QE2 648 aa10.9□□□□□ -0.66
SHMT2-215ENST00000554656 CPXM1Q96SM3 734 aa10.9□□□□□ -0.66
SHMT2-215ENST00000554656 DDX50Q9BQ39 737 aaKnown RBP10.9□□□□□ -0.66
SHMT2-215ENST00000554656 POPDC2Q9HBU9 364 aa10.9□□□□□ -0.66
SHMT2-215ENST00000554656 SCML1Q9UN30 329 aa10.9□□□□□ -0.66
SHMT2-215ENST00000554656 KNTC1P50748 2209 aa10.9□□□□□ -0.66
SHMT2-215ENST00000554656 URB1O60287 2271 aaKnown RBP10.89□□□□□ -0.67
SHMT2-215ENST00000554656 A0A1B0GTQ1 180 aa10.89□□□□□ -0.67
SHMT2-215ENST00000554656 EDDM13A0A1B0GTR0 161 aa10.89□□□□□ -0.67
SHMT2-215ENST00000554656 TARSL2A2RTX5 802 aaKnown RBP10.89□□□□□ -0.67
SHMT2-215ENST00000554656 TYW5A2RUC4 315 aaKnown RBP10.89□□□□□ -0.67
SHMT2-215ENST00000554656 FAM149AA5PLN7 773 aa10.89□□□□□ -0.67
SHMT2-215ENST00000554656 KCNU1A8MYU2 1149 aa10.89□□□□□ -0.67
SHMT2-215ENST00000554656 KIF2AO00139 706 aaPredicted RBP10.89□□□□□ -0.67
SHMT2-215ENST00000554656 RNASEH2AO75792 299 aaKnown RBP10.89□□□□□ -0.67
SHMT2-215ENST00000554656 APOEP02649 317 aa10.89□□□□□ -0.67
SHMT2-215ENST00000554656 PDGFRAP16234 1089 aa10.89□□□□□ -0.67
SHMT2-215ENST00000554656 SLC9A1P19634 815 aa10.89□□□□□ -0.67
SHMT2-215ENST00000554656 CYLC1P35663 651 aaPredicted RBP10.89□□□□□ -0.67
SHMT2-215ENST00000554656 GGCXP38435 758 aa10.89□□□□□ -0.67
SHMT2-215ENST00000554656 GRK6P43250 576 aa10.89□□□□□ -0.67
SHMT2-215ENST00000554656 KLK7P49862 253 aa10.89□□□□□ -0.67
SHMT2-215ENST00000554656 YWHAZP63104 245 aaKnown RBP10.89□□□□□ -0.67
SHMT2-215ENST00000554656 RACK1P63244 317 aaKnown RBP10.89□□□□□ -0.67
SHMT2-215ENST00000554656 CAMK2BQ13554 666 aa10.89□□□□□ -0.67
SHMT2-215ENST00000554656 COL9A2Q14055 689 aaPredicted RBP10.89□□□□□ -0.67
SHMT2-215ENST00000554656 KLHDC7AQ5VTJ3 777 aa10.89□□□□□ -0.67
SHMT2-215ENST00000554656 C19orf48Q6RUI8 117 aa10.89□□□□□ -0.67
SHMT2-215ENST00000554656 GATAD2AQ86YP4 633 aa10.89□□□□□ -0.67
SHMT2-215ENST00000554656 CCAR2Q8N163 923 aaKnown RBP10.89□□□□□ -0.67
SHMT2-215ENST00000554656 OR2T34Q8NGX1 318 aa10.89□□□□□ -0.67
SHMT2-215ENST00000554656 SHC3Q92529 594 aa10.89□□□□□ -0.67
SHMT2-215ENST00000554656 FAM131CQ96AQ9 280 aa10.89□□□□□ -0.67
SHMT2-215ENST00000554656 ALG14Q96F25 216 aa10.89□□□□□ -0.67
SHMT2-215ENST00000554656 FAM81BQ96LP2 452 aa10.89□□□□□ -0.67
SHMT2-215ENST00000554656 CCDC86Q9H6F5 360 aaKnown RBP10.89□□□□□ -0.67
SHMT2-215ENST00000554656 SIX2Q9NPC8 291 aa10.89□□□□□ -0.67
SHMT2-215ENST00000554656 FAM207AQ9NSI2 230 aaPredicted RBP10.89□□□□□ -0.67
SHMT2-215ENST00000554656 FZD4Q9ULV1 537 aa10.89□□□□□ -0.67
SHMT2-215ENST00000554656 NCKAP1Q9Y2A7 1128 aa10.89□□□□□ -0.67
SHMT2-215ENST00000554656 SYNJ2BP-COX16A0A087WUM0 186 aa10.88□□□□□ -0.67
SHMT2-215ENST00000554656 SSU72P8A0A1W2PR75 194 aa10.88□□□□□ -0.67
SHMT2-215ENST00000554656 F5H5T6 163 aa10.88□□□□□ -0.67
SHMT2-215ENST00000554656 I6L893 689 aaPredicted RBP10.88□□□□□ -0.67
SHMT2-215ENST00000554656 CAPN9O14815 690 aa10.88□□□□□ -0.67
SHMT2-215ENST00000554656 MED7O43513 233 aa10.88□□□□□ -0.67
SHMT2-215ENST00000554656 TNFSF14O43557 240 aa10.88□□□□□ -0.67
SHMT2-215ENST00000554656 RNASEH1O60930 286 aaKnown RBP10.88□□□□□ -0.67
SHMT2-215ENST00000554656 GRAP2O75791 330 aa10.88□□□□□ -0.67
SHMT2-215ENST00000554656 PNMA6AP0CW24 399 aaPredicted RBP10.88□□□□□ -0.67
SHMT2-215ENST00000554656 UCHL3P15374 230 aa10.88□□□□□ -0.67
SHMT2-215ENST00000554656 GOT1P17174 413 aa10.88□□□□□ -0.67
SHMT2-215ENST00000554656 CCR5P51681 352 aa10.88□□□□□ -0.67
SHMT2-215ENST00000554656 CLDN6P56747 220 aa10.88□□□□□ -0.67
SHMT2-215ENST00000554656 ARHGAP44Q17R89 818 aa10.88□□□□□ -0.67
SHMT2-215ENST00000554656 ARTNQ5T4W7 220 aa10.88□□□□□ -0.67
SHMT2-215ENST00000554656 E4F1Q66K89 784 aaPredicted RBP10.88□□□□□ -0.67
SHMT2-215ENST00000554656 FBXL22Q6P050 247 aa10.88□□□□□ -0.67
SHMT2-215ENST00000554656 DHRS13Q6UX07 377 aa10.88□□□□□ -0.67
SHMT2-215ENST00000554656 FAM183BPQ6ZVS7 135 aa10.88□□□□□ -0.67
SHMT2-215ENST00000554656 ADAT2Q7Z6V5 191 aaKnown RBP10.88□□□□□ -0.67
SHMT2-215ENST00000554656 PASD1Q8IV76 773 aa10.88□□□□□ -0.67
SHMT2-215ENST00000554656 DEFB106AQ8N104 65 aa10.88□□□□□ -0.67
SHMT2-215ENST00000554656 ATP6V0D2Q8N8Y2 350 aa10.88□□□□□ -0.67
SHMT2-215ENST00000554656 OMDQ99983 421 aa10.88□□□□□ -0.67
SHMT2-215ENST00000554656 ACE2Q9BYF1 805 aaPredicted RBP10.88□□□□□ -0.67
SHMT2-215ENST00000554656 FAM204AQ9H8W3 233 aa10.88□□□□□ -0.67
SHMT2-215ENST00000554656 DDIT4Q9NX09 232 aa10.88□□□□□ -0.67
SHMT2-215ENST00000554656 AIPL1Q9NZN9 384 aa10.88□□□□□ -0.67
SHMT2-215ENST00000554656 COX16Q9P0S2 106 aa10.88□□□□□ -0.67
SHMT2-215ENST00000554656 SARDHQ9UL12 918 aa10.88□□□□□ -0.67
SHMT2-215ENST00000554656 RAXQ9Y2V3 346 aa10.88□□□□□ -0.67
SHMT2-215ENST00000554656 OR51B4Q9Y5P0 310 aa10.88□□□□□ -0.67
SHMT2-215ENST00000554656 BZW2Q9Y6E2 419 aaKnown RBP10.88□□□□□ -0.67
SHMT2-215ENST00000554656 TDRD6O60522 2096 aaKnown RBP10.88□□□□□ -0.67
SHMT2-215ENST00000554656 A0A1B0GVM2 712 aa10.87□□□□□ -0.67
SHMT2-215ENST00000554656 TCAF2A6NFQ2 919 aa10.87□□□□□ -0.67
SHMT2-215ENST00000554656 LRRC72A6NJI9 287 aa10.87□□□□□ -0.67
SHMT2-215ENST00000554656 EPHB6O15197 1021 aa10.87□□□□□ -0.67
SHMT2-215ENST00000554656 LATO43561 262 aa10.87□□□□□ -0.67
SHMT2-215ENST00000554656 RTN2O75298 545 aa10.87□□□□□ -0.67
SHMT2-215ENST00000554656 MOCS3O95396 460 aa10.87□□□□□ -0.67
SHMT2-215ENST00000554656 ADH1BP00325 375 aa10.87□□□□□ -0.67
SHMT2-215ENST00000554656 ERBB2P04626 1255 aa10.87□□□□□ -0.67
SHMT2-215ENST00000554656 CCDC175P0C221 793 aa10.87□□□□□ -0.67
SHMT2-215ENST00000554656 CCDC172P0C7W6 258 aa10.87□□□□□ -0.67
SHMT2-215ENST00000554656 TFE3P19532 575 aaPredicted RBP10.87□□□□□ -0.67
SHMT2-215ENST00000554656 C5AR1P21730 350 aa10.87□□□□□ -0.67
SHMT2-215ENST00000554656 CD38P28907 300 aa10.87□□□□□ -0.67
SHMT2-215ENST00000554656 PLK1P53350 603 aa10.87□□□□□ -0.67
SHMT2-215ENST00000554656 C21orf59P57076 290 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms