RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 OR2T34Q8NGX1 318 aa7.99□□□□□ -1.13
ABCD4-220ENST00000553998 CYB5D2Q8WUJ1 264 aa7.99□□□□□ -1.13
ABCD4-220ENST00000553998 SLC35F5Q8WV83 523 aa7.99□□□□□ -1.13
ABCD4-220ENST00000553998 TTC17Q96AE7 1141 aa7.99□□□□□ -1.13
ABCD4-220ENST00000553998 FAM131CQ96AQ9 280 aa7.99□□□□□ -1.13
ABCD4-220ENST00000553998 PLD4Q96BZ4 506 aa7.99□□□□□ -1.13
ABCD4-220ENST00000553998 LMLNQ96KR4 655 aa7.99□□□□□ -1.13
ABCD4-220ENST00000553998 NOX5Q96PH1 765 aa7.99□□□□□ -1.13
ABCD4-220ENST00000553998 DPH1Q9BZG8 443 aa7.99□□□□□ -1.13
ABCD4-220ENST00000553998 PDCL3Q9H2J4 239 aa7.99□□□□□ -1.13
ABCD4-220ENST00000553998 ACP6Q9NPH0 428 aa7.99□□□□□ -1.13
ABCD4-220ENST00000553998 MARCH2Q9P0N8 246 aa7.99□□□□□ -1.13
ABCD4-220ENST00000553998 RASAL2Q9UJF2 1139 aa7.99□□□□□ -1.13
ABCD4-220ENST00000553998 NOCTQ9UK39 431 aaKnown RBP7.99□□□□□ -1.13
ABCD4-220ENST00000553998 FZD4Q9ULV1 537 aa7.99□□□□□ -1.13
ABCD4-220ENST00000553998 BZW2Q9Y6E2 419 aaKnown RBP7.99□□□□□ -1.13
ABCD4-220ENST00000553998 TP53BP1Q12888 1972 aaPredicted RBP7.99□□□□□ -1.13
ABCD4-220ENST00000553998 MUC22E2RYF6 1773 aaPredicted RBP7.98□□□□□ -1.13
ABCD4-220ENST00000553998 LRRC72A6NJI9 287 aa7.98□□□□□ -1.13
ABCD4-220ENST00000553998 SART1O43290 800 aaKnown RBP7.98□□□□□ -1.13
ABCD4-220ENST00000553998 LATO43561 262 aa7.98□□□□□ -1.13
ABCD4-220ENST00000553998 LZTS3O60299 673 aaPredicted RBP7.98□□□□□ -1.13
ABCD4-220ENST00000553998 MFAP3LO75121 409 aa7.98□□□□□ -1.13
ABCD4-220ENST00000553998 FBXO21O94952 628 aa7.98□□□□□ -1.13
ABCD4-220ENST00000553998 ADCY5O95622 1261 aa7.98□□□□□ -1.13
ABCD4-220ENST00000553998 MT-CO3P00414 261 aa7.98□□□□□ -1.13
ABCD4-220ENST00000553998 CYP1A1P04798 512 aaPredicted RBP7.98□□□□□ -1.13
ABCD4-220ENST00000553998 HMBSP08397 361 aa7.98□□□□□ -1.13
ABCD4-220ENST00000553998 PABPC1P11940 636 aaKnown RBP7.98□□□□□ -1.13
ABCD4-220ENST00000553998 CASP14P31944 242 aa7.98□□□□□ -1.13
ABCD4-220ENST00000553998 LSSP48449 732 aa7.98□□□□□ -1.13
ABCD4-220ENST00000553998 PCBP4P57723 403 aaKnown RBP7.98□□□□□ -1.13
ABCD4-220ENST00000553998 ERVPABLB-1P60509 514 aa7.98□□□□□ -1.13
ABCD4-220ENST00000553998 SKOR1P84550 965 aa7.98□□□□□ -1.13
ABCD4-220ENST00000553998 KLHL30Q0D2K2 578 aa7.98□□□□□ -1.13
ABCD4-220ENST00000553998 OVGP1Q12889 678 aa7.98□□□□□ -1.13
ABCD4-220ENST00000553998 TBX2Q13207 712 aaPredicted RBP7.98□□□□□ -1.13
ABCD4-220ENST00000553998 TSR1Q2NL82 804 aaKnown RBP7.98□□□□□ -1.13
ABCD4-220ENST00000553998 HNRNPA1L2Q32P51 320 aaKnown RBP7.98□□□□□ -1.13
ABCD4-220ENST00000553998 ADGRF1Q5T601 910 aa7.98□□□□□ -1.13
ABCD4-220ENST00000553998 MBLAC2Q68D91 279 aa7.98□□□□□ -1.13
ABCD4-220ENST00000553998 PPP1R2P3Q6NXS1 205 aa7.98□□□□□ -1.13
ABCD4-220ENST00000553998 DENND1BQ6P3S1 775 aa7.98□□□□□ -1.13
ABCD4-220ENST00000553998 NCEH1Q6PIU2 408 aa7.98□□□□□ -1.13
ABCD4-220ENST00000553998 IGF2-ASQ6U949 168 aa7.98□□□□□ -1.13
ABCD4-220ENST00000553998 TMC6Q7Z403 805 aa7.98□□□□□ -1.13
ABCD4-220ENST00000553998 IQCHQ86VS3 1027 aa7.98□□□□□ -1.13
ABCD4-220ENST00000553998 SPATS2Q86XZ4 545 aaKnown RBP7.98□□□□□ -1.13
ABCD4-220ENST00000553998 ZNF366Q8N895 744 aa7.98□□□□□ -1.13
ABCD4-220ENST00000553998 MFSD2AQ8NA29 543 aa7.98□□□□□ -1.13
ABCD4-220ENST00000553998 OR8K1Q8NGG5 319 aa7.98□□□□□ -1.13
ABCD4-220ENST00000553998 UBA3Q8TBC4 463 aa7.98□□□□□ -1.13
ABCD4-220ENST00000553998 TMA16Q96EY4 203 aaKnown RBP7.98□□□□□ -1.13
ABCD4-220ENST00000553998 MED8Q96G25 268 aa7.98□□□□□ -1.13
ABCD4-220ENST00000553998 LGMNQ99538 433 aa7.98□□□□□ -1.13
ABCD4-220ENST00000553998 DNAJC7Q99615 494 aa7.98□□□□□ -1.13
ABCD4-220ENST00000553998 SYT11Q9BT88 431 aa7.98□□□□□ -1.13
ABCD4-220ENST00000553998 SLC4A5Q9BY07 1137 aa7.98□□□□□ -1.13
ABCD4-220ENST00000553998 MIS12Q9H081 205 aa7.98□□□□□ -1.13
ABCD4-220ENST00000553998 NEUROG2Q9H2A3 272 aa7.98□□□□□ -1.13
ABCD4-220ENST00000553998 GRPEL1Q9HAV7 217 aa7.98□□□□□ -1.13
ABCD4-220ENST00000553998 LRRC4Q9HBW1 653 aa7.98□□□□□ -1.13
ABCD4-220ENST00000553998 CNGB3Q9NQW8 809 aa7.98□□□□□ -1.13
ABCD4-220ENST00000553998 ABCB8Q9NUT2 735 aa7.98□□□□□ -1.13
ABCD4-220ENST00000553998 ZNHIT6Q9NWK9 470 aaKnown RBP7.98□□□□□ -1.13
ABCD4-220ENST00000553998 FBXL12Q9NXK8 326 aa7.98□□□□□ -1.13
ABCD4-220ENST00000553998 ARHGAP20Q9P2F6 1191 aa7.98□□□□□ -1.13
ABCD4-220ENST00000553998 SERGEFQ9UGK8 458 aa7.98□□□□□ -1.13
ABCD4-220ENST00000553998 GGA2Q9UJY4 613 aa7.98□□□□□ -1.13
ABCD4-220ENST00000553998 STRIP2Q9ULQ0 834 aa7.98□□□□□ -1.13
ABCD4-220ENST00000553998 HBS1LQ9Y450 684 aaKnown RBP7.98□□□□□ -1.13
ABCD4-220ENST00000553998 CKAP5Q14008 2032 aa7.98□□□□□ -1.13
ABCD4-220ENST00000553998 UBR5O95071 2799 aaPredicted RBP7.98□□□□□ -1.13
ABCD4-220ENST00000553998 COL6A6A6NMZ7 2263 aa7.98□□□□□ -1.13
ABCD4-220ENST00000553998 COL12A1Q99715 3063 aa7.97□□□□□ -1.13
ABCD4-220ENST00000553998 SHROOM3Q8TF72 1996 aa7.97□□□□□ -1.13
ABCD4-220ENST00000553998 SLC12A8A0AV02 714 aa7.97□□□□□ -1.13
ABCD4-220ENST00000553998 TARSL2A2RTX5 802 aaKnown RBP7.97□□□□□ -1.13
ABCD4-220ENST00000553998 GOLGA6L6A8MZA4 724 aa7.97□□□□□ -1.13
ABCD4-220ENST00000553998 AKR1B15C9JRZ8 316 aaPredicted RBP7.97□□□□□ -1.13
ABCD4-220ENST00000553998 ZBED1O96006 694 aa7.97□□□□□ -1.13
ABCD4-220ENST00000553998 CALCAP01258 141 aa7.97□□□□□ -1.13
ABCD4-220ENST00000553998 SERPING1P05155 500 aa7.97□□□□□ -1.13
ABCD4-220ENST00000553998 MMEP08473 750 aa7.97□□□□□ -1.13
ABCD4-220ENST00000553998 GOT1P17174 413 aa7.97□□□□□ -1.13
ABCD4-220ENST00000553998 NUDT1P36639 197 aa7.97□□□□□ -1.13
ABCD4-220ENST00000553998 HARS2P49590 506 aaKnown RBP7.97□□□□□ -1.13
ABCD4-220ENST00000553998 CSRP3P50461 194 aa7.97□□□□□ -1.13
ABCD4-220ENST00000553998 YWHAGP61981 247 aaKnown RBP eCLIP7.97□□□□□ -1.13
ABCD4-220ENST00000553998 FMO1Q01740 532 aa7.97□□□□□ -1.13
ABCD4-220ENST00000553998 PDCLQ13371 301 aa7.97□□□□□ -1.13
ABCD4-220ENST00000553998 ZNF211Q13398 564 aaPredicted RBP7.97□□□□□ -1.13
ABCD4-220ENST00000553998 SLC45A4Q5BKX6 768 aa7.97□□□□□ -1.13
ABCD4-220ENST00000553998 C9orf64Q5T6V5 341 aa7.97□□□□□ -1.13
ABCD4-220ENST00000553998 ARHGAP40Q5TG30 622 aa7.97□□□□□ -1.13
ABCD4-220ENST00000553998 BROXQ5VW32 411 aa7.97□□□□□ -1.13
ABCD4-220ENST00000553998 TAF3Q5VWG9 929 aa7.97□□□□□ -1.13
ABCD4-220ENST00000553998 E4F1Q66K89 784 aaPredicted RBP7.97□□□□□ -1.13
ABCD4-220ENST00000553998 PMF1Q6P1K2 205 aa7.97□□□□□ -1.13
ABCD4-220ENST00000553998 BHLHA9Q7RTU4 235 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms