RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 TGM2P21980 687 aa14.88□□□□□ -0.03
SHMT2-208ENST00000553868 MCM3P25205 808 aa14.88□□□□□ -0.03
SHMT2-208ENST00000553868 HCAR3P49019 387 aa14.88□□□□□ -0.03
SHMT2-208ENST00000553868 COG7P83436 770 aa14.88□□□□□ -0.03
SHMT2-208ENST00000553868 TNK2Q07912 1038 aa14.88□□□□□ -0.03
SHMT2-208ENST00000553868 DHX34Q14147 1143 aaKnown RBP14.88□□□□□ -0.03
SHMT2-208ENST00000553868 TEAD2Q15562 447 aa14.88□□□□□ -0.03
SHMT2-208ENST00000553868 CA9Q16790 459 aa14.88□□□□□ -0.03
SHMT2-208ENST00000553868 ANKRD20A8PQ5CZ79 823 aa14.88□□□□□ -0.03
SHMT2-208ENST00000553868 NUGGCQ68CJ6 796 aa14.88□□□□□ -0.03
SHMT2-208ENST00000553868 MIB1Q86YT6 1006 aa14.88□□□□□ -0.03
SHMT2-208ENST00000553868 GRK7Q8WTQ7 553 aa14.88□□□□□ -0.03
SHMT2-208ENST00000553868 SLC39A13Q96H72 371 aa14.88□□□□□ -0.03
SHMT2-208ENST00000553868 KCTD15Q96SI1 283 aaPredicted RBP14.88□□□□□ -0.03
SHMT2-208ENST00000553868 SLC32A1Q9H598 525 aa14.88□□□□□ -0.03
SHMT2-208ENST00000553868 LRRC19Q9H756 370 aa14.88□□□□□ -0.03
SHMT2-208ENST00000553868 CCSER2Q9H7U1 834 aa14.88□□□□□ -0.03
SHMT2-208ENST00000553868 TRPV4Q9HBA0 871 aa14.88□□□□□ -0.03
SHMT2-208ENST00000553868 NUDT5Q9UKK9 219 aa14.88□□□□□ -0.03
SHMT2-208ENST00000553868 ZNF462Q96JM2 2506 aa14.88□□□□□ -0.03
SHMT2-208ENST00000553868 SHROOM3Q8TF72 1996 aa14.87□□□□□ -0.03
SHMT2-208ENST00000553868 TCRBV7S2A1N4TA0A589 114 aa14.87□□□□□ -0.03
SHMT2-208ENST00000553868 TARSL2A2RTX5 802 aaKnown RBP14.87□□□□□ -0.03
SHMT2-208ENST00000553868 EEF2KO00418 725 aaKnown RBP14.87□□□□□ -0.03
SHMT2-208ENST00000553868 DAPK3O43293 454 aa14.87□□□□□ -0.03
SHMT2-208ENST00000553868 MSI1O43347 362 aaKnown RBP14.87□□□□□ -0.03
SHMT2-208ENST00000553868 F11P03951 625 aa14.87□□□□□ -0.03
SHMT2-208ENST00000553868 GABRR2P28476 465 aa14.87□□□□□ -0.03
SHMT2-208ENST00000553868 TPI1P60174 286 aa14.87□□□□□ -0.03
SHMT2-208ENST00000553868 LLGL1Q15334 1064 aa14.87□□□□□ -0.03
SHMT2-208ENST00000553868 SIX1Q15475 284 aaPredicted RBP14.87□□□□□ -0.03
SHMT2-208ENST00000553868 ERCC6LQ2NKX8 1250 aa14.87□□□□□ -0.03
SHMT2-208ENST00000553868 C1orf228Q6PIY5 440 aa14.87□□□□□ -0.03
SHMT2-208ENST00000553868 BZW1Q7L1Q6 419 aaKnown RBP14.87□□□□□ -0.03
SHMT2-208ENST00000553868 SYNPOQ8N3V7 929 aa14.87□□□□□ -0.03
SHMT2-208ENST00000553868 TSC1Q92574 1164 aa14.87□□□□□ -0.03
SHMT2-208ENST00000553868 PLD4Q96BZ4 506 aa14.87□□□□□ -0.03
SHMT2-208ENST00000553868 BTN2A3PQ96KV6 586 aa14.87□□□□□ -0.03
SHMT2-208ENST00000553868 FCRL2Q96LA5 508 aaPredicted RBP14.87□□□□□ -0.03
SHMT2-208ENST00000553868 CSPG4P5Q96PW8 444 aa14.87□□□□□ -0.03
SHMT2-208ENST00000553868 DCLK3Q9C098 648 aa14.87□□□□□ -0.03
SHMT2-208ENST00000553868 DDX47Q9H0S4 455 aaKnown RBP14.87□□□□□ -0.03
SHMT2-208ENST00000553868 CCDC86Q9H6F5 360 aaKnown RBP14.87□□□□□ -0.03
SHMT2-208ENST00000553868 PLXNB3Q9ULL4 1909 aa14.87□□□□□ -0.03
SHMT2-208ENST00000553868 MYO18BQ8IUG5 2567 aa14.86□□□□□ -0.03
SHMT2-208ENST00000553868 URB1O60287 2271 aaKnown RBP14.86□□□□□ -0.03
SHMT2-208ENST00000553868 CFAP46Q8IYW2 2715 aa14.86□□□□□ -0.03
SHMT2-208ENST00000553868 FAM187AA6NFU0 413 aa14.86□□□□□ -0.03
SHMT2-208ENST00000553868 KCNU1A8MYU2 1149 aa14.86□□□□□ -0.03
SHMT2-208ENST00000553868 APOC4-APOC2K7ER74 178 aa14.86□□□□□ -0.03
SHMT2-208ENST00000553868 COCHO43405 550 aa14.86□□□□□ -0.03
SHMT2-208ENST00000553868 CREB3O43889 395 aa14.86□□□□□ -0.03
SHMT2-208ENST00000553868 PAGE1O75459 146 aa14.86□□□□□ -0.03
SHMT2-208ENST00000553868 ZNF189O75820 626 aaPredicted RBP14.86□□□□□ -0.03
SHMT2-208ENST00000553868 TBX18O95935 607 aa14.86□□□□□ -0.03
SHMT2-208ENST00000553868 OAS1P00973 400 aaKnown RBP14.86□□□□□ -0.03
SHMT2-208ENST00000553868 IGLV3-27P01718 113 aa14.86□□□□□ -0.03
SHMT2-208ENST00000553868 APOC2P02655 101 aa14.86□□□□□ -0.03
SHMT2-208ENST00000553868 DDX6P26196 483 aaKnown RBP eCLIP14.86□□□□□ -0.03
SHMT2-208ENST00000553868 COILP38432 576 aaPredicted RBP14.86□□□□□ -0.03
SHMT2-208ENST00000553868 HARS2P49590 506 aaKnown RBP14.86□□□□□ -0.03
SHMT2-208ENST00000553868 DYNLT1P63172 113 aa14.86□□□□□ -0.03
SHMT2-208ENST00000553868 DR1Q01658 176 aa14.86□□□□□ -0.03
SHMT2-208ENST00000553868 NRG1Q02297 640 aaPredicted RBP14.86□□□□□ -0.03
SHMT2-208ENST00000553868 FCHO2Q0JRZ9 810 aa14.86□□□□□ -0.03
SHMT2-208ENST00000553868 MMRN1Q13201 1228 aa14.86□□□□□ -0.03
SHMT2-208ENST00000553868 SLC9A4Q6AI14 798 aa14.86□□□□□ -0.03
SHMT2-208ENST00000553868 DRICH1Q6PGQ1 229 aaPredicted RBP14.86□□□□□ -0.03
SHMT2-208ENST00000553868 SYDE1Q6ZW31 735 aaPredicted RBP14.86□□□□□ -0.03
SHMT2-208ENST00000553868 ANKS1BQ7Z6G8 1248 aa14.86□□□□□ -0.03
SHMT2-208ENST00000553868 RAB44Q7Z6P3 723 aaPredicted RBP14.86□□□□□ -0.03
SHMT2-208ENST00000553868 PIP4P1Q86T03 277 aa14.86□□□□□ -0.03
SHMT2-208ENST00000553868 P3H4Q92791 437 aa14.86□□□□□ -0.03
SHMT2-208ENST00000553868 C1orf74Q96LT6 269 aa14.86□□□□□ -0.03
SHMT2-208ENST00000553868 IL21Q9HBE4 155 aa14.86□□□□□ -0.03
SHMT2-208ENST00000553868 DONSONQ9NYP3 566 aa14.86□□□□□ -0.03
SHMT2-208ENST00000553868 CWC15Q9P013 229 aaKnown RBP14.86□□□□□ -0.03
SHMT2-208ENST00000553868 OR12D3Q9UGF7 316 aa14.86□□□□□ -0.03
SHMT2-208ENST00000553868 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.86□□□□□ -0.03
SHMT2-208ENST00000553868 PCYOX1Q9UHG3 505 aa14.86□□□□□ -0.03
SHMT2-208ENST00000553868 ZMYM5Q9UJ78 669 aa14.86□□□□□ -0.03
SHMT2-208ENST00000553868 V9GYY5 206 aaPredicted RBP14.86□□□□□ -0.03
SHMT2-208ENST00000553868 MCF2LO15068 1137 aa14.85□□□□□ -0.03
SHMT2-208ENST00000553868 FGF10O15520 208 aaPredicted RBP14.85□□□□□ -0.03
SHMT2-208ENST00000553868 GAS8O95995 478 aa14.85□□□□□ -0.03
SHMT2-208ENST00000553868 MOCS2O96007 188 aaPredicted RBP14.85□□□□□ -0.03
SHMT2-208ENST00000553868 RHOXF2BP0C7M4 288 aa14.85□□□□□ -0.03
SHMT2-208ENST00000553868 GOT1P17174 413 aa14.85□□□□□ -0.03
SHMT2-208ENST00000553868 IL4RP24394 825 aa14.85□□□□□ -0.03
SHMT2-208ENST00000553868 NR2C2P49116 596 aa14.85□□□□□ -0.03
SHMT2-208ENST00000553868 SLC11A2P49281 568 aa14.85□□□□□ -0.03
SHMT2-208ENST00000553868 EPHA5P54756 1037 aa14.85□□□□□ -0.03
SHMT2-208ENST00000553868 SEMA3BQ13214 749 aa14.85□□□□□ -0.03
SHMT2-208ENST00000553868 ARHGAP15Q53QZ3 475 aa14.85□□□□□ -0.03
SHMT2-208ENST00000553868 STXBP5Q5T5C0 1151 aa14.85□□□□□ -0.03
SHMT2-208ENST00000553868 FSTL4Q6MZW2 842 aa14.85□□□□□ -0.03
SHMT2-208ENST00000553868 CCDC137Q6PK04 289 aaKnown RBP14.85□□□□□ -0.03
SHMT2-208ENST00000553868 LRRC31Q6UY01 552 aa14.85□□□□□ -0.03
SHMT2-208ENST00000553868 RFX8Q6ZV50 586 aa14.85□□□□□ -0.03
SHMT2-208ENST00000553868 TMC8Q8IU68 726 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms