RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 E9PAM4 449 aa8.57□□□□□ -1.04
PSEN1-209ENST00000553855 DDX3XO00571 662 aaKnown RBP eCLIP8.57□□□□□ -1.04
PSEN1-209ENST00000553855 DAPK3O43293 454 aa8.57□□□□□ -1.04
PSEN1-209ENST00000553855 CCP110O43303 1012 aa8.57□□□□□ -1.04
PSEN1-209ENST00000553855 LILRB5O75023 590 aa8.57□□□□□ -1.04
PSEN1-209ENST00000553855 ENDOD1O94919 500 aa8.57□□□□□ -1.04
PSEN1-209ENST00000553855 GJB6O95452 261 aa8.57□□□□□ -1.04
PSEN1-209ENST00000553855 SRPRAP08240 638 aaKnown RBP8.57□□□□□ -1.04
PSEN1-209ENST00000553855 OR1E1P30953 314 aa8.57□□□□□ -1.04
PSEN1-209ENST00000553855 CD70P32970 193 aa8.57□□□□□ -1.04
PSEN1-209ENST00000553855 ADRA1BP35368 520 aa8.57□□□□□ -1.04
PSEN1-209ENST00000553855 ETFBP38117 255 aa8.57□□□□□ -1.04
PSEN1-209ENST00000553855 SGSHP51688 502 aa8.57□□□□□ -1.04
PSEN1-209ENST00000553855 ECT2LQ008S8 904 aa8.57□□□□□ -1.04
PSEN1-209ENST00000553855 MESP2Q0VG99 397 aa8.57□□□□□ -1.04
PSEN1-209ENST00000553855 LMAN2Q12907 356 aa8.57□□□□□ -1.04
PSEN1-209ENST00000553855 PTP4A2Q12974 167 aa8.57□□□□□ -1.04
PSEN1-209ENST00000553855 C15orf59Q2T9L4 293 aaPredicted RBP8.57□□□□□ -1.04
PSEN1-209ENST00000553855 PLEKHG6Q3KR16 790 aa8.57□□□□□ -1.04
PSEN1-209ENST00000553855 C4orf17Q53FE4 359 aa8.57□□□□□ -1.04
PSEN1-209ENST00000553855 PITRM1Q5JRX3 1037 aa8.57□□□□□ -1.04
PSEN1-209ENST00000553855 LAIR1Q6GTX8 287 aa8.57□□□□□ -1.04
PSEN1-209ENST00000553855 PLEKHA7Q6IQ23 1121 aa8.57□□□□□ -1.04
PSEN1-209ENST00000553855 ALKBH5Q6P6C2 394 aaKnown RBP8.57□□□□□ -1.04
PSEN1-209ENST00000553855 SLC36A4Q6YBV0 504 aa8.57□□□□□ -1.04
PSEN1-209ENST00000553855 SFTPA1Q8IWL2 248 aa8.57□□□□□ -1.04
PSEN1-209ENST00000553855 GPR161Q8N6U8 529 aaKnown RBP8.57□□□□□ -1.04
PSEN1-209ENST00000553855 CTNNBL1Q8WYA6 563 aaPredicted RBP8.57□□□□□ -1.04
PSEN1-209ENST00000553855 RUBCNQ92622 972 aa8.57□□□□□ -1.04
PSEN1-209ENST00000553855 PRCCQ92733 491 aaPredicted RBP8.57□□□□□ -1.04
PSEN1-209ENST00000553855 NELL1Q92832 810 aa8.57□□□□□ -1.04
PSEN1-209ENST00000553855 TBC1D31Q96DN5 1066 aa8.57□□□□□ -1.04
PSEN1-209ENST00000553855 CCDC114Q96M63 670 aa8.57□□□□□ -1.04
PSEN1-209ENST00000553855 PRMT1Q99873 361 aaKnown RBP8.57□□□□□ -1.04
PSEN1-209ENST00000553855 GABRG3Q99928 467 aa8.57□□□□□ -1.04
PSEN1-209ENST00000553855 TPSD1Q9BZJ3 242 aa8.57□□□□□ -1.04
PSEN1-209ENST00000553855 EPC1Q9H2F5 836 aa8.57□□□□□ -1.04
PSEN1-209ENST00000553855 RETREG1Q9H6L5 497 aa8.57□□□□□ -1.04
PSEN1-209ENST00000553855 LUC7LQ9NQ29 371 aaKnown RBP8.57□□□□□ -1.04
PSEN1-209ENST00000553855 ZDHHC3Q9NYG2 299 aa8.57□□□□□ -1.04
PSEN1-209ENST00000553855 TAS2R14Q9NYV8 317 aa8.57□□□□□ -1.04
PSEN1-209ENST00000553855 LCMT1Q9UIC8 334 aa8.57□□□□□ -1.04
PSEN1-209ENST00000553855 CLEC4EQ9ULY5 219 aa8.57□□□□□ -1.04
PSEN1-209ENST00000553855 ZNF318Q5VUA4 2279 aa8.57□□□□□ -1.04
PSEN1-209ENST00000553855 SSU72P8A0A1W2PR75 194 aa8.56□□□□□ -1.04
PSEN1-209ENST00000553855 PRR23AA6NEV1 266 aa8.56□□□□□ -1.04
PSEN1-209ENST00000553855 EIF3CLB5ME19 914 aaKnown RBP8.56□□□□□ -1.04
PSEN1-209ENST00000553855 TGFBR3LH3BV60 316 aa8.56□□□□□ -1.04
PSEN1-209ENST00000553855 PRPSAP2O60256 369 aa8.56□□□□□ -1.04
PSEN1-209ENST00000553855 ADAM23O75077 832 aa8.56□□□□□ -1.04
PSEN1-209ENST00000553855 MFAP3LO75121 409 aa8.56□□□□□ -1.04
PSEN1-209ENST00000553855 NDUFS2O75306 463 aa8.56□□□□□ -1.04
PSEN1-209ENST00000553855 IPO7O95373 1038 aaKnown RBP8.56□□□□□ -1.04
PSEN1-209ENST00000553855 PLEKP08567 350 aaPredicted RBP8.56□□□□□ -1.04
PSEN1-209ENST00000553855 TDGF1P13385 188 aa8.56□□□□□ -1.04
PSEN1-209ENST00000553855 TFE3P19532 575 aaPredicted RBP8.56□□□□□ -1.04
PSEN1-209ENST00000553855 EIF4A3P38919 411 aaKnown RBP8.56□□□□□ -1.04
PSEN1-209ENST00000553855 CSKP41240 450 aa8.56□□□□□ -1.04
PSEN1-209ENST00000553855 DPP6P42658 865 aa8.56□□□□□ -1.04
PSEN1-209ENST00000553855 IL12RB1P42701 662 aa8.56□□□□□ -1.04
PSEN1-209ENST00000553855 SSR1P43307 286 aaKnown RBP8.56□□□□□ -1.04
PSEN1-209ENST00000553855 ATXN1P54253 815 aaKnown RBP8.56□□□□□ -1.04
PSEN1-209ENST00000553855 RPL7AP62424 266 aaKnown RBP8.56□□□□□ -1.04
PSEN1-209ENST00000553855 DMWDQ09019 674 aa8.56□□□□□ -1.04
PSEN1-209ENST00000553855 MAMLD1Q13495 774 aa8.56□□□□□ -1.04
PSEN1-209ENST00000553855 ACAP1Q15027 740 aa8.56□□□□□ -1.04
PSEN1-209ENST00000553855 HADHQ16836 314 aaKnown RBP8.56□□□□□ -1.04
PSEN1-209ENST00000553855 TTC31Q49AM3 519 aaPredicted RBP8.56□□□□□ -1.04
PSEN1-209ENST00000553855 ACCSLQ4AC99 568 aa8.56□□□□□ -1.04
PSEN1-209ENST00000553855 HGSNATQ68CP4 663 aa8.56□□□□□ -1.04
PSEN1-209ENST00000553855 RETSATQ6NUM9 610 aa8.56□□□□□ -1.04
PSEN1-209ENST00000553855 DSG4Q86SJ6 1040 aa8.56□□□□□ -1.04
PSEN1-209ENST00000553855 SETD3Q86TU7 594 aaPredicted RBP8.56□□□□□ -1.04
PSEN1-209ENST00000553855 RASSF3Q86WH2 238 aa8.56□□□□□ -1.04
PSEN1-209ENST00000553855 CIR1Q86X95 450 aaPredicted RBP8.56□□□□□ -1.04
PSEN1-209ENST00000553855 ZNF354CQ86Y25 554 aa8.56□□□□□ -1.04
PSEN1-209ENST00000553855 KDM1BQ8NB78 822 aa8.56□□□□□ -1.04
PSEN1-209ENST00000553855 MDGA1Q8NFP4 955 aa8.56□□□□□ -1.04
PSEN1-209ENST00000553855 GANCQ8TET4 914 aa8.56□□□□□ -1.04
PSEN1-209ENST00000553855 FNIP1Q8TF40 1166 aa8.56□□□□□ -1.04
PSEN1-209ENST00000553855 CYB5D2Q8WUJ1 264 aa8.56□□□□□ -1.04
PSEN1-209ENST00000553855 SORCS1Q8WY21 1168 aa8.56□□□□□ -1.04
PSEN1-209ENST00000553855 CENPIQ92674 756 aaPredicted RBP8.56□□□□□ -1.04
PSEN1-209ENST00000553855 HPS1Q92902 700 aa8.56□□□□□ -1.04
PSEN1-209ENST00000553855 IGSF8Q969P0 613 aa8.56□□□□□ -1.04
PSEN1-209ENST00000553855 NTAN1Q96AB6 310 aa8.56□□□□□ -1.04
PSEN1-209ENST00000553855 TTC17Q96AE7 1141 aa8.56□□□□□ -1.04
PSEN1-209ENST00000553855 SIPA1Q96FS4 1042 aa8.56□□□□□ -1.04
PSEN1-209ENST00000553855 ACOX2Q99424 681 aa8.56□□□□□ -1.04
PSEN1-209ENST00000553855 EIF3CQ99613 913 aaKnown RBP8.56□□□□□ -1.04
PSEN1-209ENST00000553855 DNAJC7Q99615 494 aa8.56□□□□□ -1.04
PSEN1-209ENST00000553855 SYT11Q9BT88 431 aa8.56□□□□□ -1.04
PSEN1-209ENST00000553855 ISCUQ9H1K1 167 aa8.56□□□□□ -1.04
PSEN1-209ENST00000553855 OSBPL2Q9H1P3 480 aa8.56□□□□□ -1.04
PSEN1-209ENST00000553855 CATSPERBQ9H7T0 1116 aa8.56□□□□□ -1.04
PSEN1-209ENST00000553855 PRDM16Q9HAZ2 1276 aa8.56□□□□□ -1.04
PSEN1-209ENST00000553855 ABHD10Q9NUJ1 306 aa8.56□□□□□ -1.04
PSEN1-209ENST00000553855 POLR3BQ9NW08 1133 aaPredicted RBP8.56□□□□□ -1.04
PSEN1-209ENST00000553855 C2orf42Q9NWW7 574 aa8.56□□□□□ -1.04
PSEN1-209ENST00000553855 PPARGC1AQ9UBK2 798 aaKnown RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms