RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 OR51B4Q9Y5P0 310 aa9.35□□□□□ -0.91
PRKCH-208ENST00000553846 A0A1W2PQU0 124 aa9.34□□□□□ -0.91
PRKCH-208ENST00000553846 ALOX15BO15296 676 aa9.34□□□□□ -0.91
PRKCH-208ENST00000553846 CLSTN1O94985 981 aa9.34□□□□□ -0.91
PRKCH-208ENST00000553846 TNFSF15O95150 251 aa9.34□□□□□ -0.91
PRKCH-208ENST00000553846 CSF2P04141 144 aa9.34□□□□□ -0.91
PRKCH-208ENST00000553846 ALPPL2P10696 532 aa9.34□□□□□ -0.91
PRKCH-208ENST00000553846 CLDN2P57739 230 aa9.34□□□□□ -0.91
PRKCH-208ENST00000553846 CLCA4Q14CN2 919 aa9.34□□□□□ -0.91
PRKCH-208ENST00000553846 TGIF1Q15583 401 aa9.34□□□□□ -0.91
PRKCH-208ENST00000553846 NFIL3Q16649 462 aa9.34□□□□□ -0.91
PRKCH-208ENST00000553846 CDKN3Q16667 212 aa9.34□□□□□ -0.91
PRKCH-208ENST00000553846 ZSCAN23Q3MJ62 389 aa9.34□□□□□ -0.91
PRKCH-208ENST00000553846 NEK5Q6P3R8 708 aa9.34□□□□□ -0.91
PRKCH-208ENST00000553846 EFL1Q7Z2Z2 1120 aaKnown RBP9.34□□□□□ -0.91
PRKCH-208ENST00000553846 B3GNT8Q7Z7M8 397 aa9.34□□□□□ -0.91
PRKCH-208ENST00000553846 CARNMT1Q8N4J0 409 aa9.34□□□□□ -0.91
PRKCH-208ENST00000553846 IQUBQ8NA54 791 aa9.34□□□□□ -0.91
PRKCH-208ENST00000553846 OR52K2Q8NGK3 314 aa9.34□□□□□ -0.91
PRKCH-208ENST00000553846 WDR36Q8NI36 951 aaKnown RBP9.34□□□□□ -0.91
PRKCH-208ENST00000553846 DQX1Q8TE96 717 aaKnown RBP9.34□□□□□ -0.91
PRKCH-208ENST00000553846 CLEC4CQ8WTT0 213 aa9.34□□□□□ -0.91
PRKCH-208ENST00000553846 EEF2KMTQ96G04 330 aa9.34□□□□□ -0.91
PRKCH-208ENST00000553846 BMFQ96LC9 184 aa9.34□□□□□ -0.91
PRKCH-208ENST00000553846 PRMT1Q99873 361 aaKnown RBP9.34□□□□□ -0.91
PRKCH-208ENST00000553846 MYOCQ99972 504 aa9.34□□□□□ -0.91
PRKCH-208ENST00000553846 DUSP23Q9BVJ7 150 aa9.34□□□□□ -0.91
PRKCH-208ENST00000553846 IMPG2Q9BZV3 1241 aa9.34□□□□□ -0.91
PRKCH-208ENST00000553846 TMEM8AQ9HCN3 771 aa9.34□□□□□ -0.91
PRKCH-208ENST00000553846 PNMA8BQ9ULN7 279 aaPredicted RBP9.34□□□□□ -0.91
PRKCH-208ENST00000553846 MTMR6Q9Y217 621 aa9.34□□□□□ -0.91
PRKCH-208ENST00000553846 TLR6Q9Y2C9 796 aa9.34□□□□□ -0.91
PRKCH-208ENST00000553846 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.34□□□□□ -0.91
PRKCH-208ENST00000553846 PCDHGA4Q9Y5G9 962 aa9.34□□□□□ -0.91
PRKCH-208ENST00000553846 CSNK1G3Q9Y6M4 447 aa9.34□□□□□ -0.91
PRKCH-208ENST00000553846 LRP4O75096 1905 aa9.33□□□□□ -0.92
PRKCH-208ENST00000553846 CCDC187A0A096LP49 1063 aa9.33□□□□□ -0.92
PRKCH-208ENST00000553846 SPTY2D1-AS1A0A0U1RR47 76 aa9.33□□□□□ -0.92
PRKCH-208ENST00000553846 RIOK3O14730 519 aaKnown RBP9.33□□□□□ -0.92
PRKCH-208ENST00000553846 MCF2LO15068 1137 aa9.33□□□□□ -0.92
PRKCH-208ENST00000553846 SLC31A1O15431 190 aa9.33□□□□□ -0.92
PRKCH-208ENST00000553846 SPINT1O43278 529 aa9.33□□□□□ -0.92
PRKCH-208ENST00000553846 PPP6R2O75170 966 aa9.33□□□□□ -0.92
PRKCH-208ENST00000553846 IGLV3-25P01717 112 aa9.33□□□□□ -0.92
PRKCH-208ENST00000553846 CENPBP07199 599 aaPredicted RBP9.33□□□□□ -0.92
PRKCH-208ENST00000553846 SETSIPP0DME0 302 aa9.33□□□□□ -0.92
PRKCH-208ENST00000553846 SYT1P21579 422 aa9.33□□□□□ -0.92
PRKCH-208ENST00000553846 HNRNPA2B1P22626 353 aaKnown RBP9.33□□□□□ -0.92
PRKCH-208ENST00000553846 SLC5A2P31639 672 aa9.33□□□□□ -0.92
PRKCH-208ENST00000553846 TBX4P57082 545 aa9.33□□□□□ -0.92
PRKCH-208ENST00000553846 HNRNPKP61978 463 aaKnown RBP eCLIP9.33□□□□□ -0.92
PRKCH-208ENST00000553846 FOXK1P85037 733 aa9.33□□□□□ -0.92
PRKCH-208ENST00000553846 SERINC3Q13530 473 aa9.33□□□□□ -0.92
PRKCH-208ENST00000553846 TBR1Q16650 682 aa9.33□□□□□ -0.92
PRKCH-208ENST00000553846 SGO2Q562F6 1265 aa9.33□□□□□ -0.92
PRKCH-208ENST00000553846 ZNF542PQ5EBM4 170 aa9.33□□□□□ -0.92
PRKCH-208ENST00000553846 SEL1L3Q68CR1 1132 aa9.33□□□□□ -0.92
PRKCH-208ENST00000553846 PMF1Q6P1K2 205 aa9.33□□□□□ -0.92
PRKCH-208ENST00000553846 KYAT3Q6YP21 454 aaKnown RBP9.33□□□□□ -0.92
PRKCH-208ENST00000553846 Q6ZVU0 165 aa9.33□□□□□ -0.92
PRKCH-208ENST00000553846 HORMAD1Q86X24 394 aa9.33□□□□□ -0.92
PRKCH-208ENST00000553846 SLC35F3Q8IY50 421 aa9.33□□□□□ -0.92
PRKCH-208ENST00000553846 GRAMD1CQ8IYS0 662 aa9.33□□□□□ -0.92
PRKCH-208ENST00000553846 ARL14Q8N4G2 192 aa9.33□□□□□ -0.92
PRKCH-208ENST00000553846 TTC39CQ8N584 583 aa9.33□□□□□ -0.92
PRKCH-208ENST00000553846 TPCN2Q8NHX9 752 aa9.33□□□□□ -0.92
PRKCH-208ENST00000553846 SLC35F5Q8WV83 523 aa9.33□□□□□ -0.92
PRKCH-208ENST00000553846 OR8D1Q8WZ84 308 aa9.33□□□□□ -0.92
PRKCH-208ENST00000553846 IRGQQ8WZA9 623 aa9.33□□□□□ -0.92
PRKCH-208ENST00000553846 KLK6Q92876 244 aa9.33□□□□□ -0.92
PRKCH-208ENST00000553846 IPO9Q96P70 1041 aaKnown RBP9.33□□□□□ -0.92
PRKCH-208ENST00000553846 CALN1Q9BXU9 219 aa9.33□□□□□ -0.92
PRKCH-208ENST00000553846 EPN3Q9H201 632 aa9.33□□□□□ -0.92
PRKCH-208ENST00000553846 LRRC4Q9HBW1 653 aa9.33□□□□□ -0.92
PRKCH-208ENST00000553846 GEMIN8Q9NWZ8 242 aaKnown RBP9.33□□□□□ -0.92
PRKCH-208ENST00000553846 SALL4Q9UJQ4 1053 aa9.33□□□□□ -0.92
PRKCH-208ENST00000553846 MAN2B2Q9Y2E5 1009 aa9.33□□□□□ -0.92
PRKCH-208ENST00000553846 POM121BA6NF01 834 aa9.32□□□□□ -0.92
PRKCH-208ENST00000553846 NEMP2A6NFY4 417 aa9.32□□□□□ -0.92
PRKCH-208ENST00000553846 TPP1O14773 563 aa9.32□□□□□ -0.92
PRKCH-208ENST00000553846 PLD2O14939 933 aa9.32□□□□□ -0.92
PRKCH-208ENST00000553846 RAD51BO15315 384 aa9.32□□□□□ -0.92
PRKCH-208ENST00000553846 POLR2DO15514 142 aaKnown RBP9.32□□□□□ -0.92
PRKCH-208ENST00000553846 LTFP02788 710 aa9.32□□□□□ -0.92
PRKCH-208ENST00000553846 GTF2H1P32780 548 aa9.32□□□□□ -0.92
PRKCH-208ENST00000553846 RPL34P49207 117 aaKnown RBP9.32□□□□□ -0.92
PRKCH-208ENST00000553846 NUMBP49757 651 aa9.32□□□□□ -0.92
PRKCH-208ENST00000553846 IRAK1P51617 712 aa9.32□□□□□ -0.92
PRKCH-208ENST00000553846 SLC12A1Q13621 1099 aa9.32□□□□□ -0.92
PRKCH-208ENST00000553846 ZCWPW2Q504Y3 356 aa9.32□□□□□ -0.92
PRKCH-208ENST00000553846 HS1BP3Q53T59 392 aa9.32□□□□□ -0.92
PRKCH-208ENST00000553846 ARTNQ5T4W7 220 aa9.32□□□□□ -0.92
PRKCH-208ENST00000553846 FAM46CQ5VWP2 391 aa9.32□□□□□ -0.92
PRKCH-208ENST00000553846 CEP135Q66GS9 1140 aa9.32□□□□□ -0.92
PRKCH-208ENST00000553846 OR6B2Q6IFH4 312 aa9.32□□□□□ -0.92
PRKCH-208ENST00000553846 CRTC1Q6UUV9 634 aa9.32□□□□□ -0.92
PRKCH-208ENST00000553846 Q6ZSR6 202 aa9.32□□□□□ -0.92
PRKCH-208ENST00000553846 INTS8Q75QN2 995 aaKnown RBP9.32□□□□□ -0.92
PRKCH-208ENST00000553846 DSG4Q86SJ6 1040 aa9.32□□□□□ -0.92
PRKCH-208ENST00000553846 TAC4Q86UU9 113 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms