RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 PIP5KL1Q5T9C9 394 aa9.34□□□□□ -0.91
SYNE2-209ENST00000553308 ANKRD40Q6AI12 368 aa9.34□□□□□ -0.91
SYNE2-209ENST00000553308 FAM181AQ8N9Y4 354 aa9.34□□□□□ -0.91
SYNE2-209ENST00000553308 OR13H1Q8NG92 308 aa9.34□□□□□ -0.91
SYNE2-209ENST00000553308 ERCC4Q92889 916 aaPredicted RBP9.34□□□□□ -0.91
SYNE2-209ENST00000553308 SNX21Q969T3 373 aa9.34□□□□□ -0.91
SYNE2-209ENST00000553308 ALG14Q96F25 216 aa9.34□□□□□ -0.91
SYNE2-209ENST00000553308 WBP1Q96G27 269 aa9.34□□□□□ -0.91
SYNE2-209ENST00000553308 VCPIP1Q96JH7 1222 aa9.34□□□□□ -0.91
SYNE2-209ENST00000553308 APOLD1Q96LR9 279 aa9.34□□□□□ -0.91
SYNE2-209ENST00000553308 NT5C1BQ96P26 610 aa9.34□□□□□ -0.91
SYNE2-209ENST00000553308 OSBPL2Q9H1P3 480 aa9.34□□□□□ -0.91
SYNE2-209ENST00000553308 POLR1BQ9H9Y6 1135 aa9.34□□□□□ -0.91
SYNE2-209ENST00000553308 PREBQ9HCU5 417 aa9.34□□□□□ -0.91
SYNE2-209ENST00000553308 KLHL11Q9NVR0 708 aa9.34□□□□□ -0.91
SYNE2-209ENST00000553308 ARMCX3Q9UH62 379 aaPredicted RBP9.34□□□□□ -0.91
SYNE2-209ENST00000553308 A0A1W2PNU3 283 aaPredicted RBP9.33□□□□□ -0.92
SYNE2-209ENST00000553308 KCNU1A8MYU2 1149 aa9.33□□□□□ -0.92
SYNE2-209ENST00000553308 B8ZZF3 427 aa9.33□□□□□ -0.92
SYNE2-209ENST00000553308 RNF103O00237 685 aa9.33□□□□□ -0.92
SYNE2-209ENST00000553308 MCF2LO15068 1137 aa9.33□□□□□ -0.92
SYNE2-209ENST00000553308 ALOX15BO15296 676 aa9.33□□□□□ -0.92
SYNE2-209ENST00000553308 NEBLO76041 1014 aa9.33□□□□□ -0.92
SYNE2-209ENST00000553308 ZNF202O95125 648 aa9.33□□□□□ -0.92
SYNE2-209ENST00000553308 CTSLP07711 333 aa9.33□□□□□ -0.92
SYNE2-209ENST00000553308 C6P13671 934 aa9.33□□□□□ -0.92
SYNE2-209ENST00000553308 ZNF18P17022 549 aa9.33□□□□□ -0.92
SYNE2-209ENST00000553308 GGCXP38435 758 aa9.33□□□□□ -0.92
SYNE2-209ENST00000553308 GPD2P43304 727 aa9.33□□□□□ -0.92
SYNE2-209ENST00000553308 VASPP50552 380 aaPredicted RBP9.33□□□□□ -0.92
SYNE2-209ENST00000553308 ERVPABLB-1P60509 514 aa9.33□□□□□ -0.92
SYNE2-209ENST00000553308 FKBP3Q00688 224 aaKnown RBP9.33□□□□□ -0.92
SYNE2-209ENST00000553308 VAC14Q08AM6 782 aa9.33□□□□□ -0.92
SYNE2-209ENST00000553308 PNOCQ13519 176 aa9.33□□□□□ -0.92
SYNE2-209ENST00000553308 DLG2Q15700 870 aa9.33□□□□□ -0.92
SYNE2-209ENST00000553308 ZNF284Q2VY69 593 aa9.33□□□□□ -0.92
SYNE2-209ENST00000553308 ZNF542PQ5EBM4 170 aa9.33□□□□□ -0.92
SYNE2-209ENST00000553308 C3orf38Q5JPI3 329 aa9.33□□□□□ -0.92
SYNE2-209ENST00000553308 TTC39BQ5VTQ0 682 aaPredicted RBP9.33□□□□□ -0.92
SYNE2-209ENST00000553308 FBXL22Q6P050 247 aa9.33□□□□□ -0.92
SYNE2-209ENST00000553308 DENND1BQ6P3S1 775 aa9.33□□□□□ -0.92
SYNE2-209ENST00000553308 GCNT7Q6ZNI0 430 aa9.33□□□□□ -0.92
SYNE2-209ENST00000553308 BEND5Q7L4P6 421 aa9.33□□□□□ -0.92
SYNE2-209ENST00000553308 RRAGAQ7L523 313 aa9.33□□□□□ -0.92
SYNE2-209ENST00000553308 ARHGEF19Q8IW93 802 aa9.33□□□□□ -0.92
SYNE2-209ENST00000553308 LSMEM2Q8N112 164 aa9.33□□□□□ -0.92
SYNE2-209ENST00000553308 SLC22A18ASQ8N1D0 253 aa9.33□□□□□ -0.92
SYNE2-209ENST00000553308 SH2D3CQ8N5H7 860 aa9.33□□□□□ -0.92
SYNE2-209ENST00000553308 ATP6V0D2Q8N8Y2 350 aa9.33□□□□□ -0.92
SYNE2-209ENST00000553308 ARRDC3Q96B67 414 aa9.33□□□□□ -0.92
SYNE2-209ENST00000553308 TSG101Q99816 390 aa9.33□□□□□ -0.92
SYNE2-209ENST00000553308 CLMPQ9H6B4 373 aa9.33□□□□□ -0.92
SYNE2-209ENST00000553308 THSD1Q9NS62 852 aa9.33□□□□□ -0.92
SYNE2-209ENST00000553308 NLGN3Q9NZ94 848 aa9.33□□□□□ -0.92
SYNE2-209ENST00000553308 SLC25A13Q9UJS0 675 aa9.33□□□□□ -0.92
SYNE2-209ENST00000553308 ZFR2Q9UPR6 939 aaKnown RBP9.33□□□□□ -0.92
SYNE2-209ENST00000553308 SATB2Q9UPW6 733 aa9.33□□□□□ -0.92
SYNE2-209ENST00000553308 TDRD6O60522 2096 aaKnown RBP9.33□□□□□ -0.92
SYNE2-209ENST00000553308 CFAP46Q8IYW2 2715 aa9.33□□□□□ -0.92
SYNE2-209ENST00000553308 TENM4Q6N022 2769 aa9.32□□□□□ -0.92
SYNE2-209ENST00000553308 SYNJ2BP-COX16A0A087WUM0 186 aa9.32□□□□□ -0.92
SYNE2-209ENST00000553308 PMS2P1A4D2B8 440 aa9.32□□□□□ -0.92
SYNE2-209ENST00000553308 E5RJQ4 531 aa9.32□□□□□ -0.92
SYNE2-209ENST00000553308 K7ESM1 405 aa9.32□□□□□ -0.92
SYNE2-209ENST00000553308 KPNA3O00505 521 aaPredicted RBP9.32□□□□□ -0.92
SYNE2-209ENST00000553308 GP1BAP07359 652 aa9.32□□□□□ -0.92
SYNE2-209ENST00000553308 ALPPL2P10696 532 aa9.32□□□□□ -0.92
SYNE2-209ENST00000553308 TGM2P21980 687 aa9.32□□□□□ -0.92
SYNE2-209ENST00000553308 HNRNPA2B1P22626 353 aaKnown RBP9.32□□□□□ -0.92
SYNE2-209ENST00000553308 AKT2P31751 481 aa9.32□□□□□ -0.92
SYNE2-209ENST00000553308 ACADSBP45954 432 aa9.32□□□□□ -0.92
SYNE2-209ENST00000553308 YWHAZP63104 245 aaKnown RBP9.32□□□□□ -0.92
SYNE2-209ENST00000553308 KRT85P78386 507 aa9.32□□□□□ -0.92
SYNE2-209ENST00000553308 EIF4EBP2Q13542 120 aaPredicted RBP9.32□□□□□ -0.92
SYNE2-209ENST00000553308 TAF5Q15542 800 aa9.32□□□□□ -0.92
SYNE2-209ENST00000553308 ISXQ2M1V0 245 aa9.32□□□□□ -0.92
SYNE2-209ENST00000553308 RABGAP1LQ5R372 815 aa9.32□□□□□ -0.92
SYNE2-209ENST00000553308 KIAA1614Q5VZ46 1190 aa9.32□□□□□ -0.92
SYNE2-209ENST00000553308 SEL1L3Q68CR1 1132 aa9.32□□□□□ -0.92
SYNE2-209ENST00000553308 OR6B2Q6IFH4 312 aa9.32□□□□□ -0.92
SYNE2-209ENST00000553308 PTAR1Q7Z6K3 402 aaPredicted RBP9.32□□□□□ -0.92
SYNE2-209ENST00000553308 HORMAD1Q86X24 394 aa9.32□□□□□ -0.92
SYNE2-209ENST00000553308 HSCBQ8IWL3 235 aa9.32□□□□□ -0.92
SYNE2-209ENST00000553308 LMO3Q8TAP4 145 aa9.32□□□□□ -0.92
SYNE2-209ENST00000553308 IFI44Q8TCB0 444 aa9.32□□□□□ -0.92
SYNE2-209ENST00000553308 MAPK15Q8TD08 544 aa9.32□□□□□ -0.92
SYNE2-209ENST00000553308 SNRNP27Q8WVK2 155 aaKnown RBP9.32□□□□□ -0.92
SYNE2-209ENST00000553308 KREMEN1Q96MU8 473 aa9.32□□□□□ -0.92
SYNE2-209ENST00000553308 RPRD1AQ96P16 312 aaPredicted RBP9.32□□□□□ -0.92
SYNE2-209ENST00000553308 FEM1AQ9BSK4 669 aa9.32□□□□□ -0.92
SYNE2-209ENST00000553308 TRIM62Q9BVG3 475 aa9.32□□□□□ -0.92
SYNE2-209ENST00000553308 SLC4A5Q9BY07 1137 aa9.32□□□□□ -0.92
SYNE2-209ENST00000553308 DPH1Q9BZG8 443 aa9.32□□□□□ -0.92
SYNE2-209ENST00000553308 ABCG4Q9H172 646 aa9.32□□□□□ -0.92
SYNE2-209ENST00000553308 FAM204AQ9H8W3 233 aa9.32□□□□□ -0.92
SYNE2-209ENST00000553308 POPDC2Q9HBU9 364 aa9.32□□□□□ -0.92
SYNE2-209ENST00000553308 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.32□□□□□ -0.92
SYNE2-209ENST00000553308 DNAJC28Q9NX36 388 aa9.32□□□□□ -0.92
SYNE2-209ENST00000553308 COX16Q9P0S2 106 aa9.32□□□□□ -0.92
SYNE2-209ENST00000553308 VPS28Q9UK41 221 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms