RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 MAB21L3Q8N8X9 362 aa19.97■□□□□ 0.79
RBFOX1-215ENST00000553186 OXNAD1Q96HP4 312 aaPredicted RBP19.97■□□□□ 0.79
RBFOX1-215ENST00000553186 CORO1BQ9BR76 489 aa19.97■□□□□ 0.79
RBFOX1-215ENST00000553186 ATXN3LQ9H3M9 355 aa19.97■□□□□ 0.79
RBFOX1-215ENST00000553186 EXOC1LA0A1B0GW35 172 aa19.96■□□□□ 0.79
RBFOX1-215ENST00000553186 ERI2A8K979 691 aaKnown RBP19.96■□□□□ 0.79
RBFOX1-215ENST00000553186 LATS1O95835 1130 aa19.96■□□□□ 0.79
RBFOX1-215ENST00000553186 AGTP01019 485 aa19.96■□□□□ 0.79
RBFOX1-215ENST00000553186 GJA1P17302 382 aa19.96■□□□□ 0.79
RBFOX1-215ENST00000553186 CDC25CP30307 473 aa19.96■□□□□ 0.79
RBFOX1-215ENST00000553186 PHBP35232 272 aa19.96■□□□□ 0.79
RBFOX1-215ENST00000553186 CDH4P55283 916 aa19.96■□□□□ 0.79
RBFOX1-215ENST00000553186 OLIG2Q13516 323 aa19.96■□□□□ 0.79
RBFOX1-215ENST00000553186 SERINC3Q13530 473 aa19.96■□□□□ 0.79
RBFOX1-215ENST00000553186 HNRNPDQ14103 355 aaKnown RBP19.96■□□□□ 0.79
RBFOX1-215ENST00000553186 SKIDA1Q1XH10 827 aa19.96■□□□□ 0.79
RBFOX1-215ENST00000553186 RABGAP1LQ5R372 815 aa19.96■□□□□ 0.79
RBFOX1-215ENST00000553186 Q6ZNB5 142 aa19.96■□□□□ 0.79
RBFOX1-215ENST00000553186 FBF1Q8TES7 1133 aa19.96■□□□□ 0.79
RBFOX1-215ENST00000553186 TGS1Q96RS0 853 aaKnown RBP19.96■□□□□ 0.79
RBFOX1-215ENST00000553186 ACSS3Q9H6R3 686 aa19.96■□□□□ 0.79
RBFOX1-215ENST00000553186 MAN1C1Q9NR34 630 aa19.96■□□□□ 0.79
RBFOX1-215ENST00000553186 ASAH2Q9NR71 780 aa19.96■□□□□ 0.79
RBFOX1-215ENST00000553186 RBM22Q9NW64 420 aaKnown RBP eCLIP19.96■□□□□ 0.79
RBFOX1-215ENST00000553186 HCFC1R1Q9NWW0 138 aa19.96■□□□□ 0.79
RBFOX1-215ENST00000553186 MYO7AQ13402 2215 aa19.96■□□□□ 0.79
RBFOX1-215ENST00000553186 SHROOM3Q8TF72 1996 aa19.96■□□□□ 0.79
RBFOX1-215ENST00000553186 OBSL1O75147 1896 aa19.96■□□□□ 0.79
RBFOX1-215ENST00000553186 LPXNO60711 386 aa19.95■□□□□ 0.78
RBFOX1-215ENST00000553186 CDH16O75309 829 aa19.95■□□□□ 0.78
RBFOX1-215ENST00000553186 HLA-DQB2P05538 268 aa19.95■□□□□ 0.78
RBFOX1-215ENST00000553186 ACVRL1P37023 503 aa19.95■□□□□ 0.78
RBFOX1-215ENST00000553186 CCR2P41597 374 aa19.95■□□□□ 0.78
RBFOX1-215ENST00000553186 EPHA5P54756 1037 aa19.95■□□□□ 0.78
RBFOX1-215ENST00000553186 SLC7A9P82251 487 aa19.95■□□□□ 0.78
RBFOX1-215ENST00000553186 ANO4Q32M45 955 aa19.95■□□□□ 0.78
RBFOX1-215ENST00000553186 STXBP5Q5T5C0 1151 aa19.95■□□□□ 0.78
RBFOX1-215ENST00000553186 OR52K2Q8NGK3 314 aa19.95■□□□□ 0.78
RBFOX1-215ENST00000553186 FCRL5Q96RD9 977 aa19.95■□□□□ 0.78
RBFOX1-215ENST00000553186 EBNA1BP2Q99848 306 aaKnown RBP19.95■□□□□ 0.78
RBFOX1-215ENST00000553186 GLOD4Q9HC38 313 aa19.95■□□□□ 0.78
RBFOX1-215ENST00000553186 PIH1D1Q9NWS0 290 aaKnown RBP19.95■□□□□ 0.78
RBFOX1-215ENST00000553186 ZC3H7BQ9UGR2 993 aaKnown RBP19.95■□□□□ 0.78
RBFOX1-215ENST00000553186 LGALS13Q9UHV8 139 aa19.95■□□□□ 0.78
RBFOX1-215ENST00000553186 YBX2Q9Y2T7 364 aaKnown RBP19.95■□□□□ 0.78
RBFOX1-215ENST00000553186 TCRBV9S1A1TA0A576 114 aa19.95■□□□□ 0.78
RBFOX1-215ENST00000553186 CLASP2O75122 1294 aaKnown RBP19.95■□□□□ 0.78
RBFOX1-215ENST00000553186 MYL4P12829 197 aa19.95■□□□□ 0.78
RBFOX1-215ENST00000553186 EPCAMP16422 314 aa19.95■□□□□ 0.78
RBFOX1-215ENST00000553186 MMP13P45452 471 aa19.95■□□□□ 0.78
RBFOX1-215ENST00000553186 IFNAR2P48551 515 aa19.95■□□□□ 0.78
RBFOX1-215ENST00000553186 ERVK-21P61565 698 aa19.95■□□□□ 0.78
RBFOX1-215ENST00000553186 KDM7AQ6ZMT4 941 aa19.95■□□□□ 0.78
RBFOX1-215ENST00000553186 TDRPQ86YL5 185 aa19.95■□□□□ 0.78
RBFOX1-215ENST00000553186 CYP4X1Q8N118 509 aa19.95■□□□□ 0.78
RBFOX1-215ENST00000553186 XPO6Q96QU8 1125 aaKnown RBP19.95■□□□□ 0.78
RBFOX1-215ENST00000553186 GFRA2O00451 464 aa19.94■□□□□ 0.78
RBFOX1-215ENST00000553186 CLDN11O75508 207 aa19.94■□□□□ 0.78
RBFOX1-215ENST00000553186 SPAG6O75602 509 aa19.94■□□□□ 0.78
RBFOX1-215ENST00000553186 HPDP32754 393 aaPredicted RBP19.94■□□□□ 0.78
RBFOX1-215ENST00000553186 GABPB1Q06547 395 aaPredicted RBP19.94■□□□□ 0.78
RBFOX1-215ENST00000553186 ARNTL2Q8WYA1 636 aa19.94■□□□□ 0.78
RBFOX1-215ENST00000553186 ARHGEF2Q92974 986 aaKnown RBP19.94■□□□□ 0.78
RBFOX1-215ENST00000553186 TRIM56Q9BRZ2 755 aaKnown RBP19.94■□□□□ 0.78
RBFOX1-215ENST00000553186 SLC46A2Q9BY10 475 aa19.94■□□□□ 0.78
RBFOX1-215ENST00000553186 FETUBQ9UGM5 382 aa19.94■□□□□ 0.78
RBFOX1-215ENST00000553186 PCDHA11Q9Y5I1 949 aa19.94■□□□□ 0.78
RBFOX1-215ENST00000553186 A0A0D9SEW6 157 aa19.94■□□□□ 0.78
RBFOX1-215ENST00000553186 SDR42E2A6NKP2 422 aa19.94■□□□□ 0.78
RBFOX1-215ENST00000553186 SCAMP3O14828 347 aaKnown RBP19.94■□□□□ 0.78
RBFOX1-215ENST00000553186 USP12O75317 370 aa19.94■□□□□ 0.78
RBFOX1-215ENST00000553186 CPP00450 1065 aa19.94■□□□□ 0.78
RBFOX1-215ENST00000553186 C1QAP02745 245 aa19.94■□□□□ 0.78
RBFOX1-215ENST00000553186 CKMP06732 381 aa19.94■□□□□ 0.78
RBFOX1-215ENST00000553186 HOXA9P31269 272 aa19.94■□□□□ 0.78
RBFOX1-215ENST00000553186 RENBPP51606 427 aa19.94■□□□□ 0.78
RBFOX1-215ENST00000553186 SLC10A7Q0GE19 358 aa19.94■□□□□ 0.78
RBFOX1-215ENST00000553186 EFTUD2Q15029 972 aaKnown RBP eCLIP19.94■□□□□ 0.78
RBFOX1-215ENST00000553186 TERF2Q15554 542 aa19.94■□□□□ 0.78
RBFOX1-215ENST00000553186 CHST9Q7L1S5 443 aa19.94■□□□□ 0.78
RBFOX1-215ENST00000553186 TEX26Q8N6G2 289 aa19.94■□□□□ 0.78
RBFOX1-215ENST00000553186 SPATA22Q8NHS9 363 aa19.94■□□□□ 0.78
RBFOX1-215ENST00000553186 CFAP36Q96G28 342 aa19.94■□□□□ 0.78
RBFOX1-215ENST00000553186 SAMD11Q96NU1 681 aa19.94■□□□□ 0.78
RBFOX1-215ENST00000553186 DDX50Q9BQ39 737 aaKnown RBP19.94■□□□□ 0.78
RBFOX1-215ENST00000553186 SP110Q9HB58 689 aa19.94■□□□□ 0.78
RBFOX1-215ENST00000553186 CASS4Q9NQ75 786 aa19.94■□□□□ 0.78
RBFOX1-215ENST00000553186 UBP1Q9NZI7 540 aa19.94■□□□□ 0.78
RBFOX1-215ENST00000553186 TSPAN3O60637 253 aa19.93■□□□□ 0.78
RBFOX1-215ENST00000553186 PIAS1O75925 651 aa19.93■□□□□ 0.78
RBFOX1-215ENST00000553186 SESN2P58004 480 aaPredicted RBP19.93■□□□□ 0.78
RBFOX1-215ENST00000553186 SKOR1P84550 965 aa19.93■□□□□ 0.78
RBFOX1-215ENST00000553186 TNK2Q07912 1038 aa19.93■□□□□ 0.78
RBFOX1-215ENST00000553186 IL10RBQ08334 325 aa19.93■□□□□ 0.78
RBFOX1-215ENST00000553186 PRPSAP1Q14558 356 aa19.93■□□□□ 0.78
RBFOX1-215ENST00000553186 RASA2Q15283 850 aa19.93■□□□□ 0.78
RBFOX1-215ENST00000553186 UNC5AQ6ZN44 842 aa19.93■□□□□ 0.78
RBFOX1-215ENST00000553186 RIBC1Q8N443 379 aaPredicted RBP19.93■□□□□ 0.78
RBFOX1-215ENST00000553186 OR52K1Q8NGK4 314 aa19.93■□□□□ 0.78
RBFOX1-215ENST00000553186 STMN4Q9H169 189 aaPredicted RBP19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms