RNA–Protein interactions for RNA: ENST00000549995.1

PFDN5-208, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-208ENST00000549995 OR7D4Q8NG98 312 aa12.19□□□□□ -0.46
PFDN5-208ENST00000549995 OR2T3Q8NH03 318 aa12.19□□□□□ -0.46
PFDN5-208ENST00000549995 GAB3Q8WWW8 586 aa12.19□□□□□ -0.46
PFDN5-208ENST00000549995 FAM131CQ96AQ9 280 aa12.19□□□□□ -0.46
PFDN5-208ENST00000549995 MRGPRX1Q96LB2 322 aa12.19□□□□□ -0.46
PFDN5-208ENST00000549995 CSPG4P5Q96PW8 444 aa12.19□□□□□ -0.46
PFDN5-208ENST00000549995 CEP44Q9C0F1 390 aa12.19□□□□□ -0.46
PFDN5-208ENST00000549995 LACRTQ9GZZ8 138 aa12.19□□□□□ -0.46
PFDN5-208ENST00000549995 MUC3BQ9H195 1237 aa12.19□□□□□ -0.46
PFDN5-208ENST00000549995 ZWILCHQ9H900 591 aa12.19□□□□□ -0.46
PFDN5-208ENST00000549995 USP36Q9P275 1121 aaKnown RBP12.19□□□□□ -0.46
PFDN5-208ENST00000549995 RAPGEFL1Q9UHV5 662 aa12.19□□□□□ -0.46
PFDN5-208ENST00000549995 SLC25A13Q9UJS0 675 aa12.19□□□□□ -0.46
PFDN5-208ENST00000549995 VPS28Q9UK41 221 aa12.19□□□□□ -0.46
PFDN5-208ENST00000549995 RAD54BQ9Y620 910 aa12.19□□□□□ -0.46
PFDN5-208ENST00000549995 VPS13AQ96RL7 3174 aa12.19□□□□□ -0.46
PFDN5-208ENST00000549995 ZSCAN5CA6NGD5 496 aaPredicted RBP12.18□□□□□ -0.46
PFDN5-208ENST00000549995 ALOX15BO15296 676 aa12.18□□□□□ -0.46
PFDN5-208ENST00000549995 PSTPIP1O43586 416 aa12.18□□□□□ -0.46
PFDN5-208ENST00000549995 KDELR3O43731 214 aa12.18□□□□□ -0.46
PFDN5-208ENST00000549995 CREB3O43889 395 aa12.18□□□□□ -0.46
PFDN5-208ENST00000549995 BUB1BO60566 1050 aaPredicted RBP12.18□□□□□ -0.46
PFDN5-208ENST00000549995 ZNF821O75541 412 aaPredicted RBP12.18□□□□□ -0.46
PFDN5-208ENST00000549995 EPHX1P07099 455 aa12.18□□□□□ -0.46
PFDN5-208ENST00000549995 ERCC2P18074 760 aa12.18□□□□□ -0.46
PFDN5-208ENST00000549995 P2RY2P41231 377 aa12.18□□□□□ -0.46
PFDN5-208ENST00000549995 WASP42768 502 aa12.18□□□□□ -0.46
PFDN5-208ENST00000549995 STK19P49842 368 aaPredicted RBP12.18□□□□□ -0.46
PFDN5-208ENST00000549995 SERPINH1P50454 418 aaKnown RBP12.18□□□□□ -0.46
PFDN5-208ENST00000549995 GEMIN4P57678 1058 aaKnown RBP12.18□□□□□ -0.46
PFDN5-208ENST00000549995 ST8SIA6P61647 398 aa12.18□□□□□ -0.46
PFDN5-208ENST00000549995 SERINC3Q13530 473 aa12.18□□□□□ -0.46
PFDN5-208ENST00000549995 DPYSL3Q14195 570 aa12.18□□□□□ -0.46
PFDN5-208ENST00000549995 MESDQ14696 234 aa12.18□□□□□ -0.46
PFDN5-208ENST00000549995 SMTNL2Q2TAL5 461 aa12.18□□□□□ -0.46
PFDN5-208ENST00000549995 MAP7D1Q3KQU3 841 aa12.18□□□□□ -0.46
PFDN5-208ENST00000549995 FNDC3BQ53EP0 1204 aaKnown RBP12.18□□□□□ -0.46
PFDN5-208ENST00000549995 C9orf64Q5T6V5 341 aa12.18□□□□□ -0.46
PFDN5-208ENST00000549995 C11orf74Q86VG3 221 aa12.18□□□□□ -0.46
PFDN5-208ENST00000549995 LRRC8AQ8IWT6 810 aa12.18□□□□□ -0.46
PFDN5-208ENST00000549995 LRRC57Q8N9N7 239 aa12.18□□□□□ -0.46
PFDN5-208ENST00000549995 TPCN2Q8NHX9 752 aa12.18□□□□□ -0.46
PFDN5-208ENST00000549995 CASKIN2Q8WXE0 1202 aa12.18□□□□□ -0.46
PFDN5-208ENST00000549995 ATOH1Q92858 354 aaPredicted RBP12.18□□□□□ -0.46
PFDN5-208ENST00000549995 PTPRN2Q92932 1015 aa12.18□□□□□ -0.46
PFDN5-208ENST00000549995 ISG20Q96AZ6 181 aaKnown RBP12.18□□□□□ -0.46
PFDN5-208ENST00000549995 ZC3H10Q96K80 434 aaKnown RBP12.18□□□□□ -0.46
PFDN5-208ENST00000549995 MKRN2Q9H000 416 aaKnown RBP12.18□□□□□ -0.46
PFDN5-208ENST00000549995 RSPH9Q9H1X1 276 aaPredicted RBP12.18□□□□□ -0.46
PFDN5-208ENST00000549995 PRDM16Q9HAZ2 1276 aa12.18□□□□□ -0.46
PFDN5-208ENST00000549995 PDFQ9HBH1 243 aa12.18□□□□□ -0.46
PFDN5-208ENST00000549995 ATP13A1Q9HD20 1204 aa12.18□□□□□ -0.46
PFDN5-208ENST00000549995 PRSS16Q9NQE7 514 aa12.18□□□□□ -0.46
PFDN5-208ENST00000549995 DNAI1Q9UI46 699 aa12.18□□□□□ -0.46
PFDN5-208ENST00000549995 SLCO3A1Q9UIG8 710 aa12.18□□□□□ -0.46
PFDN5-208ENST00000549995 ADGRG1Q9Y653 693 aa12.18□□□□□ -0.46
PFDN5-208ENST00000549995 OTOGLQ3ZCN5 2332 aa12.18□□□□□ -0.46
PFDN5-208ENST00000549995 C3orf70A6NLC5 250 aaPredicted RBP12.17□□□□□ -0.46
PFDN5-208ENST00000549995 TTC34A8MYJ7 566 aa12.17□□□□□ -0.46
PFDN5-208ENST00000549995 RASA4BC9J798 803 aa12.17□□□□□ -0.46
PFDN5-208ENST00000549995 RASA4O43374 803 aa12.17□□□□□ -0.46
PFDN5-208ENST00000549995 HRO43593 1189 aa12.17□□□□□ -0.46
PFDN5-208ENST00000549995 SNAP91O60641 907 aa12.17□□□□□ -0.46
PFDN5-208ENST00000549995 SIN3BO75182 1162 aa12.17□□□□□ -0.46
PFDN5-208ENST00000549995 HLA-EP13747 358 aa12.17□□□□□ -0.46
PFDN5-208ENST00000549995 GLDCP23378 1020 aa12.17□□□□□ -0.46
PFDN5-208ENST00000549995 ACVRL1P37023 503 aa12.17□□□□□ -0.46
PFDN5-208ENST00000549995 ARL4AP40617 200 aa12.17□□□□□ -0.46
PFDN5-208ENST00000549995 POLD3Q15054 466 aaPredicted RBP12.17□□□□□ -0.46
PFDN5-208ENST00000549995 PAFAH1B3Q15102 231 aaKnown RBP12.17□□□□□ -0.46
PFDN5-208ENST00000549995 INO80DQ53TQ3 878 aaPredicted RBP12.17□□□□□ -0.46
PFDN5-208ENST00000549995 PPP6R3Q5H9R7 873 aaPredicted RBP12.17□□□□□ -0.46
PFDN5-208ENST00000549995 SPDYCQ5MJ68 293 aa12.17□□□□□ -0.46
PFDN5-208ENST00000549995 ANO7Q6IWH7 933 aa12.17□□□□□ -0.46
PFDN5-208ENST00000549995 RETSATQ6NUM9 610 aa12.17□□□□□ -0.46
PFDN5-208ENST00000549995 NPWQ8N729 165 aa12.17□□□□□ -0.46
PFDN5-208ENST00000549995 SUMF1Q8NBK3 374 aa12.17□□□□□ -0.46
PFDN5-208ENST00000549995 UBE2Q2Q8WVN8 375 aa12.17□□□□□ -0.46
PFDN5-208ENST00000549995 HSPH1Q92598 858 aa12.17□□□□□ -0.46
PFDN5-208ENST00000549995 VOPP1Q96AW1 172 aa12.17□□□□□ -0.46
PFDN5-208ENST00000549995 FAM129BQ96TA1 746 aa12.17□□□□□ -0.46
PFDN5-208ENST00000549995 SCML1Q9UN30 329 aa12.17□□□□□ -0.46
PFDN5-208ENST00000549995 TFR2Q9UP52 801 aa12.17□□□□□ -0.46
PFDN5-208ENST00000549995 ALG6Q9Y672 507 aa12.17□□□□□ -0.46
PFDN5-208ENST00000549995 SYNCRIPO60506 623 aaKnown RBP12.16□□□□□ -0.46
PFDN5-208ENST00000549995 ZNF217O75362 1048 aa12.16□□□□□ -0.46
PFDN5-208ENST00000549995 MT-CO1P00395 513 aa12.16□□□□□ -0.46
PFDN5-208ENST00000549995 CD48P09326 243 aa12.16□□□□□ -0.46
PFDN5-208ENST00000549995 COMTP21964 271 aa12.16□□□□□ -0.46
PFDN5-208ENST00000549995 KDELR1P24390 212 aa12.16□□□□□ -0.46
PFDN5-208ENST00000549995 SERPINB6P35237 376 aa12.16□□□□□ -0.46
PFDN5-208ENST00000549995 NNMTP40261 264 aa12.16□□□□□ -0.46
PFDN5-208ENST00000549995 CDH6P55285 790 aa12.16□□□□□ -0.46
PFDN5-208ENST00000549995 RPS14P62263 151 aaKnown RBP12.16□□□□□ -0.46
PFDN5-208ENST00000549995 ELAVL3Q14576 367 aaKnown RBP12.16□□□□□ -0.46
PFDN5-208ENST00000549995 ATP13A4Q4VNC1 1196 aa12.16□□□□□ -0.46
PFDN5-208ENST00000549995 C22orf39Q6P5X5 142 aa12.16□□□□□ -0.46
PFDN5-208ENST00000549995 MAP7D3Q8IWC1 876 aa12.16□□□□□ -0.46
PFDN5-208ENST00000549995 RHOT1Q8IXI2 618 aa12.16□□□□□ -0.46
PFDN5-208ENST00000549995 RNF10Q8N5U6 811 aaKnown RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms