RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 NUP93Q8N1F7 819 aa13.99□□□□□ -0.17
HDAC7-228ENST00000548938 LZICQ8WZA0 190 aa13.99□□□□□ -0.17
HDAC7-228ENST00000548938 IRGQQ8WZA9 623 aa13.99□□□□□ -0.17
HDAC7-228ENST00000548938 DLG3Q92796 817 aa13.99□□□□□ -0.17
HDAC7-228ENST00000548938 TMA16Q96EY4 203 aaKnown RBP13.99□□□□□ -0.17
HDAC7-228ENST00000548938 NAT9Q9BTE0 207 aa13.99□□□□□ -0.17
HDAC7-228ENST00000548938 ZNF385DQ9H6B1 395 aa13.99□□□□□ -0.17
HDAC7-228ENST00000548938 ELP3Q9H9T3 547 aa13.99□□□□□ -0.17
HDAC7-228ENST00000548938 EIF2B3Q9NR50 452 aaKnown RBP13.99□□□□□ -0.17
HDAC7-228ENST00000548938 ADAM28Q9UKQ2 775 aa13.99□□□□□ -0.17
HDAC7-228ENST00000548938 USP3Q9Y6I4 520 aa13.99□□□□□ -0.17
HDAC7-228ENST00000548938 C7orf72A4D263 438 aa13.99□□□□□ -0.17
HDAC7-228ENST00000548938 GRID2O43424 1007 aa13.99□□□□□ -0.17
HDAC7-228ENST00000548938 TOMM70O94826 608 aa13.99□□□□□ -0.17
HDAC7-228ENST00000548938 PIGNO95427 931 aa13.99□□□□□ -0.17
HDAC7-228ENST00000548938 CAPNS1P04632 268 aa13.99□□□□□ -0.17
HDAC7-228ENST00000548938 C2P06681 752 aa13.99□□□□□ -0.17
HDAC7-228ENST00000548938 ZNF26P17031 533 aaPredicted RBP13.99□□□□□ -0.17
HDAC7-228ENST00000548938 SPRP35270 261 aaPredicted RBP13.99□□□□□ -0.17
HDAC7-228ENST00000548938 PPIDQ08752 370 aaKnown RBP13.99□□□□□ -0.17
HDAC7-228ENST00000548938 IL23RQ5VWK5 629 aa13.99□□□□□ -0.17
HDAC7-228ENST00000548938 NXNQ6DKJ4 435 aa13.99□□□□□ -0.17
HDAC7-228ENST00000548938 TSPAN14Q8NG11 270 aa13.99□□□□□ -0.17
HDAC7-228ENST00000548938 OR52K1Q8NGK4 314 aa13.99□□□□□ -0.17
HDAC7-228ENST00000548938 GRIN3AQ8TCU5 1115 aa13.99□□□□□ -0.17
HDAC7-228ENST00000548938 SEPT1Q8WYJ6 367 aa13.99□□□□□ -0.17
HDAC7-228ENST00000548938 ATP6V1E2Q96A05 226 aa13.99□□□□□ -0.17
HDAC7-228ENST00000548938 EME1Q96AY2 570 aa13.99□□□□□ -0.17
HDAC7-228ENST00000548938 NPAS2Q99743 824 aa13.99□□□□□ -0.17
HDAC7-228ENST00000548938 CCT7Q99832 543 aa13.99□□□□□ -0.17
HDAC7-228ENST00000548938 LPIN3Q9BQK8 851 aa13.99□□□□□ -0.17
HDAC7-228ENST00000548938 SEMA6AQ9H2E6 1030 aa13.99□□□□□ -0.17
HDAC7-228ENST00000548938 OXSMQ9NWU1 459 aa13.99□□□□□ -0.17
HDAC7-228ENST00000548938 BCAP29Q9UHQ4 241 aa13.99□□□□□ -0.17
HDAC7-228ENST00000548938 TNFSF13BQ9Y275 285 aa13.99□□□□□ -0.17
HDAC7-228ENST00000548938 IGKV6-21A0A0C4DH24 114 aa13.98□□□□□ -0.17
HDAC7-228ENST00000548938 VAPBO95292 243 aa13.98□□□□□ -0.17
HDAC7-228ENST00000548938 EPHX2P34913 555 aa13.98□□□□□ -0.17
HDAC7-228ENST00000548938 IREB2P48200 963 aaKnown RBP13.98□□□□□ -0.17
HDAC7-228ENST00000548938 ART3Q13508 389 aa13.98□□□□□ -0.17
HDAC7-228ENST00000548938 LPIN1Q14693 890 aa13.98□□□□□ -0.17
HDAC7-228ENST00000548938 LY6KQ17RY6 165 aa13.98□□□□□ -0.17
HDAC7-228ENST00000548938 MGAT5BQ3V5L5 792 aa13.98□□□□□ -0.17
HDAC7-228ENST00000548938 PKDCCQ504Y2 493 aa13.98□□□□□ -0.17
HDAC7-228ENST00000548938 ARL13AQ5H913 290 aaPredicted RBP13.98□□□□□ -0.17
HDAC7-228ENST00000548938 SPANXN3Q5MJ09 141 aa13.98□□□□□ -0.17
HDAC7-228ENST00000548938 TMEM110Q86TL2 294 aa13.98□□□□□ -0.17
HDAC7-228ENST00000548938 URGCPQ8TCY9 931 aa13.98□□□□□ -0.17
HDAC7-228ENST00000548938 DIS3LQ8TF46 1054 aaKnown RBP13.98□□□□□ -0.17
HDAC7-228ENST00000548938 SREK1Q8WXA9 508 aaKnown RBP13.98□□□□□ -0.17
HDAC7-228ENST00000548938 CDCA5Q96FF9 252 aa13.98□□□□□ -0.17
HDAC7-228ENST00000548938 OTUD5Q96G74 571 aa13.98□□□□□ -0.17
HDAC7-228ENST00000548938 PPP1R16BQ96T49 567 aa13.98□□□□□ -0.17
HDAC7-228ENST00000548938 RSL24D1Q9UHA3 163 aaKnown RBP13.98□□□□□ -0.17
HDAC7-228ENST00000548938 PADI4Q9UM07 663 aa13.98□□□□□ -0.17
HDAC7-228ENST00000548938 MAGED2Q9UNF1 606 aaPredicted RBP13.98□□□□□ -0.17
HDAC7-228ENST00000548938 ZNF510Q9Y2H8 683 aa13.98□□□□□ -0.17
HDAC7-228ENST00000548938 RAP2CQ9Y3L5 183 aa13.98□□□□□ -0.17
HDAC7-228ENST00000548938 SNX9Q9Y5X1 595 aa13.98□□□□□ -0.17
HDAC7-228ENST00000548938 XPO1O14980 1071 aaKnown RBP13.98□□□□□ -0.17
HDAC7-228ENST00000548938 CSPG5O95196 566 aa13.98□□□□□ -0.17
HDAC7-228ENST00000548938 FGFR3P22607 806 aa13.98□□□□□ -0.17
HDAC7-228ENST00000548938 GRIA4P48058 902 aa13.98□□□□□ -0.17
HDAC7-228ENST00000548938 RPL14P50914 215 aaKnown RBP13.98□□□□□ -0.17
HDAC7-228ENST00000548938 SOWAHAQ2M3V2 549 aa13.98□□□□□ -0.17
HDAC7-228ENST00000548938 SLC10A6Q3KNW5 377 aa13.98□□□□□ -0.17
HDAC7-228ENST00000548938 USP50Q70EL3 339 aaPredicted RBP13.98□□□□□ -0.17
HDAC7-228ENST00000548938 CPSF7Q8N684 471 aaKnown RBP13.98□□□□□ -0.17
HDAC7-228ENST00000548938 SNRNP27Q8WVK2 155 aaKnown RBP13.98□□□□□ -0.17
HDAC7-228ENST00000548938 HSPBAP1Q96EW2 488 aa13.98□□□□□ -0.17
HDAC7-228ENST00000548938 FAM167AQ96KS9 214 aa13.98□□□□□ -0.17
HDAC7-228ENST00000548938 PLEKHG4BQ96PX9 1271 aa13.98□□□□□ -0.17
HDAC7-228ENST00000548938 C11orf84Q9BUA3 381 aaPredicted RBP13.98□□□□□ -0.17
HDAC7-228ENST00000548938 ACE2Q9BYF1 805 aaPredicted RBP13.98□□□□□ -0.17
HDAC7-228ENST00000548938 PRDM16Q9HAZ2 1276 aa13.98□□□□□ -0.17
HDAC7-228ENST00000548938 THEGQ9P2T0 379 aa13.98□□□□□ -0.17
HDAC7-228ENST00000548938 EPS15L1Q9UBC2 864 aa13.98□□□□□ -0.17
HDAC7-228ENST00000548938 ZDHHC2Q9UIJ5 367 aa13.98□□□□□ -0.17
HDAC7-228ENST00000548938 HACD1B0YJ81 288 aa13.97□□□□□ -0.17
HDAC7-228ENST00000548938 ZNF23P17027 643 aa13.97□□□□□ -0.17
HDAC7-228ENST00000548938 PTPN9P43378 593 aa13.97□□□□□ -0.17
HDAC7-228ENST00000548938 SULT2A1Q06520 285 aa13.97□□□□□ -0.17
HDAC7-228ENST00000548938 NSUN2Q08J23 767 aaKnown RBP eCLIP13.97□□□□□ -0.17
HDAC7-228ENST00000548938 LBX2Q6XYB7 198 aa13.97□□□□□ -0.17
HDAC7-228ENST00000548938 SETD3Q86TU7 594 aaPredicted RBP13.97□□□□□ -0.17
HDAC7-228ENST00000548938 FAM131BQ86XD5 332 aa13.97□□□□□ -0.17
HDAC7-228ENST00000548938 TP53INP2Q8IXH6 220 aa13.97□□□□□ -0.17
HDAC7-228ENST00000548938 ZNF567Q8N184 647 aa13.97□□□□□ -0.17
HDAC7-228ENST00000548938 CCNYQ8ND76 341 aa13.97□□□□□ -0.17
HDAC7-228ENST00000548938 MIPOL1Q8TD10 442 aa13.97□□□□□ -0.17
HDAC7-228ENST00000548938 SLC35F5Q8WV83 523 aa13.97□□□□□ -0.17
HDAC7-228ENST00000548938 DRC3Q9H069 523 aa13.97□□□□□ -0.17
HDAC7-228ENST00000548938 ZBTB26Q9HCK0 441 aa13.97□□□□□ -0.17
HDAC7-228ENST00000548938 TFEBP19484 476 aa13.97□□□□□ -0.17
HDAC7-228ENST00000548938 TMEM132DQ14C87 1099 aa13.97□□□□□ -0.17
HDAC7-228ENST00000548938 ACBD5Q5T8D3 534 aaPredicted RBP13.97□□□□□ -0.17
HDAC7-228ENST00000548938 KLHL35Q6PF15 583 aa13.97□□□□□ -0.17
HDAC7-228ENST00000548938 GADL1Q6ZQY3 521 aa13.97□□□□□ -0.17
HDAC7-228ENST00000548938 TRIML2Q8N7C3 387 aa13.97□□□□□ -0.17
HDAC7-228ENST00000548938 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms