RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 DDI1Q8WTU0 396 aa10.06□□□□□ -0.8
SMARCD1-205ENST00000548573 NT5C3BQ969T7 300 aa10.06□□□□□ -0.8
SMARCD1-205ENST00000548573 VPS39Q96JC1 886 aa10.06□□□□□ -0.8
SMARCD1-205ENST00000548573 PPP1R16BQ96T49 567 aa10.06□□□□□ -0.8
SMARCD1-205ENST00000548573 ACE2Q9BYF1 805 aaPredicted RBP10.06□□□□□ -0.8
SMARCD1-205ENST00000548573 DNAI2Q9GZS0 605 aa10.06□□□□□ -0.8
SMARCD1-205ENST00000548573 RBM38Q9H0Z9 239 aaKnown RBP10.06□□□□□ -0.8
SMARCD1-205ENST00000548573 CAB39LQ9H9S4 337 aa10.06□□□□□ -0.8
SMARCD1-205ENST00000548573 EFCAB1Q9HAE3 211 aa10.06□□□□□ -0.8
SMARCD1-205ENST00000548573 NSMCE4AQ9NXX6 385 aa10.06□□□□□ -0.8
SMARCD1-205ENST00000548573 KLHL8Q9P2G9 620 aaPredicted RBP10.06□□□□□ -0.8
SMARCD1-205ENST00000548573 DMTF1Q9Y222 760 aa10.06□□□□□ -0.8
SMARCD1-205ENST00000548573 COL1A2P08123 1366 aa10.06□□□□□ -0.8
SMARCD1-205ENST00000548573 NFKBIEO00221 500 aa10.06□□□□□ -0.8
SMARCD1-205ENST00000548573 DCLK1O15075 740 aa10.06□□□□□ -0.8
SMARCD1-205ENST00000548573 NCAM2O15394 837 aa10.06□□□□□ -0.8
SMARCD1-205ENST00000548573 CNMDO75829 334 aa10.06□□□□□ -0.8
SMARCD1-205ENST00000548573 TMCC1O94876 653 aa10.06□□□□□ -0.8
SMARCD1-205ENST00000548573 SPATA31D3P0C874 917 aa10.06□□□□□ -0.8
SMARCD1-205ENST00000548573 TFEBP19484 476 aa10.06□□□□□ -0.8
SMARCD1-205ENST00000548573 PTPN3P26045 913 aa10.06□□□□□ -0.8
SMARCD1-205ENST00000548573 NOS2P35228 1153 aa10.06□□□□□ -0.8
SMARCD1-205ENST00000548573 GRIA4P48058 902 aa10.06□□□□□ -0.8
SMARCD1-205ENST00000548573 NPY2RP49146 381 aa10.06□□□□□ -0.8
SMARCD1-205ENST00000548573 MYBPC1Q00872 1141 aa10.06□□□□□ -0.8
SMARCD1-205ENST00000548573 NSUN2Q08J23 767 aaKnown RBP eCLIP10.06□□□□□ -0.8
SMARCD1-205ENST00000548573 APOFQ13790 326 aa10.06□□□□□ -0.8
SMARCD1-205ENST00000548573 CEACAM7Q14002 265 aa10.06□□□□□ -0.8
SMARCD1-205ENST00000548573 ADRM1Q16186 407 aa10.06□□□□□ -0.8
SMARCD1-205ENST00000548573 ANO4Q32M45 955 aa10.06□□□□□ -0.8
SMARCD1-205ENST00000548573 NADK2Q4G0N4 442 aa10.06□□□□□ -0.8
SMARCD1-205ENST00000548573 SH2D4BQ5SQS7 431 aa10.06□□□□□ -0.8
SMARCD1-205ENST00000548573 OTUD1Q5VV17 481 aaPredicted RBP10.06□□□□□ -0.8
SMARCD1-205ENST00000548573 SPATA31D4Q6ZUB0 917 aa10.06□□□□□ -0.8
SMARCD1-205ENST00000548573 KCNMB4Q86W47 210 aa10.06□□□□□ -0.8
SMARCD1-205ENST00000548573 METTL25Q8N6Q8 603 aa10.06□□□□□ -0.8
SMARCD1-205ENST00000548573 BHLHE22Q8NFJ8 381 aaPredicted RBP10.06□□□□□ -0.8
SMARCD1-205ENST00000548573 BEST2Q8NFU1 509 aa10.06□□□□□ -0.8
SMARCD1-205ENST00000548573 AGR3Q8TD06 166 aa10.06□□□□□ -0.8
SMARCD1-205ENST00000548573 NLRP7Q8WX94 980 aa10.06□□□□□ -0.8
SMARCD1-205ENST00000548573 LENG1Q96BZ8 264 aaPredicted RBP10.06□□□□□ -0.8
SMARCD1-205ENST00000548573 RCN3Q96D15 328 aa10.06□□□□□ -0.8
SMARCD1-205ENST00000548573 TSNARE1Q96NA8 513 aa10.06□□□□□ -0.8
SMARCD1-205ENST00000548573 ZMAT2Q96NC0 199 aaKnown RBP10.06□□□□□ -0.8
SMARCD1-205ENST00000548573 NPY6RQ99463 290 aa10.06□□□□□ -0.8
SMARCD1-205ENST00000548573 GPR22Q99680 433 aa10.06□□□□□ -0.8
SMARCD1-205ENST00000548573 LPIN3Q9BQK8 851 aa10.06□□□□□ -0.8
SMARCD1-205ENST00000548573 C1QTNF1Q9BXJ1 281 aa10.06□□□□□ -0.8
SMARCD1-205ENST00000548573 WDR41Q9HAD4 459 aa10.06□□□□□ -0.8
SMARCD1-205ENST00000548573 ZBTB26Q9HCK0 441 aa10.06□□□□□ -0.8
SMARCD1-205ENST00000548573 SETD4Q9NVD3 440 aa10.06□□□□□ -0.8
SMARCD1-205ENST00000548573 PACSIN3Q9UKS6 424 aa10.06□□□□□ -0.8
SMARCD1-205ENST00000548573 GNEQ9Y223 722 aaKnown RBP10.06□□□□□ -0.8
SMARCD1-205ENST00000548573 CDYLQ9Y232 598 aa10.06□□□□□ -0.8
SMARCD1-205ENST00000548573 SCN1AP35498 2009 aa10.06□□□□□ -0.8
SMARCD1-205ENST00000548573 ARHGAP10A1A4S6 786 aa10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 H0YJX3 145 aa10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 EEF2KO00418 725 aaKnown RBP10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 NEMP1O14524 444 aa10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 IRF6O14896 467 aa10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 XPO1O14980 1071 aaKnown RBP10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 USP2O75604 605 aaPredicted RBP10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 PIGNO95427 931 aa10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 LGALS2P05162 132 aa10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 FAM58BPP0C7Q3 252 aa10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 CD1EP15812 388 aa10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 EPHA3P29320 983 aa10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 GTF2A2P52657 109 aa10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 AIF1P55008 147 aa10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 MS4A2Q01362 244 aa10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 ART3Q13508 389 aa10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 OLIG2Q13516 323 aa10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 VGLL4Q14135 290 aa10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 DALRD3Q5D0E6 543 aaKnown RBP10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 ARL13AQ5H913 290 aaPredicted RBP10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 KLHDC10Q6PID8 442 aa10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 LILRA2Q8N149 483 aa10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 DNAAF3Q8N9W5 541 aa10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 NETO2Q8NC67 525 aa10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 PDCD6IPQ8WUM4 868 aaKnown RBP10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 MFSD3Q96ES6 412 aa10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 SNX27Q96L92 541 aa10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 PDGFDQ9GZP0 370 aaPredicted RBP10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 BRD8Q9H0E9 1235 aa10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 R3HDMLQ9H3Y0 253 aa10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 OCEL1Q9H607 264 aa10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 TASP1Q9H6P5 420 aa10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 COPS7BQ9H9Q2 264 aaPredicted RBP10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 TUBGCP4Q9UGJ1 667 aa10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 TLK1Q9UKI8 766 aa10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 STAP1Q9ULZ2 295 aa10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 MYO18AQ92614 2054 aaKnown RBP10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 FZD9O00144 591 aa10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 KCNK1O00180 336 aa10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 AP3B1O00203 1094 aa10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 ACOT8O14734 319 aa10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 MTSS1O43312 755 aa10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 HCRTO43612 131 aa10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 USP12O75317 370 aa10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 DDHD2O94830 711 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms