RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 ENTPD5O75356 428 aa18.89■□□□□ 0.61
PRPF40B-208ENST00000548436 TYMPP19971 482 aa18.89■□□□□ 0.61
PRPF40B-208ENST00000548436 CCNCP24863 283 aa18.89■□□□□ 0.61
PRPF40B-208ENST00000548436 ARRB2P32121 409 aa18.89■□□□□ 0.61
PRPF40B-208ENST00000548436 SERPINB8P50452 374 aa18.89■□□□□ 0.61
PRPF40B-208ENST00000548436 COG7P83436 770 aa18.89■□□□□ 0.61
PRPF40B-208ENST00000548436 YWHAHQ04917 246 aaPredicted RBP18.89■□□□□ 0.61
PRPF40B-208ENST00000548436 ZNF33AQ06730 810 aa18.89■□□□□ 0.61
PRPF40B-208ENST00000548436 CDH17Q12864 832 aa18.89■□□□□ 0.61
PRPF40B-208ENST00000548436 PRPSAP1Q14558 356 aa18.89■□□□□ 0.61
PRPF40B-208ENST00000548436 BRMS1LQ5PSV4 323 aa18.89■□□□□ 0.61
PRPF40B-208ENST00000548436 MANEALQ5VSG8 457 aa18.89■□□□□ 0.61
PRPF40B-208ENST00000548436 C4orf50Q6ZRC1 276 aa18.89■□□□□ 0.61
PRPF40B-208ENST00000548436 ACVR1CQ8NER5 493 aa18.89■□□□□ 0.61
PRPF40B-208ENST00000548436 PIWIL2Q8TC59 973 aaKnown RBP18.89■□□□□ 0.61
PRPF40B-208ENST00000548436 MCMBPQ9BTE3 642 aa18.89■□□□□ 0.61
PRPF40B-208ENST00000548436 SMOC2Q9H3U7 446 aa18.89■□□□□ 0.61
PRPF40B-208ENST00000548436 NMUR1Q9HB89 426 aa18.89■□□□□ 0.61
PRPF40B-208ENST00000548436 BPTFQ12830 3046 aa18.88■□□□□ 0.61
PRPF40B-208ENST00000548436 CCDC78A2IDD5 438 aa18.88■□□□□ 0.61
PRPF40B-208ENST00000548436 KIF3CO14782 793 aa18.88■□□□□ 0.61
PRPF40B-208ENST00000548436 DIAPH2O60879 1101 aa18.88■□□□□ 0.61
PRPF40B-208ENST00000548436 MT-CYBP00156 380 aaPredicted RBP18.88■□□□□ 0.61
PRPF40B-208ENST00000548436 SERPINE1P05121 402 aa18.88■□□□□ 0.61
PRPF40B-208ENST00000548436 HOXC13P31276 330 aa18.88■□□□□ 0.61
PRPF40B-208ENST00000548436 CPA2P48052 419 aa18.88■□□□□ 0.61
PRPF40B-208ENST00000548436 TM4SF4P48230 202 aa18.88■□□□□ 0.61
PRPF40B-208ENST00000548436 DLG2Q15700 870 aa18.88■□□□□ 0.61
PRPF40B-208ENST00000548436 FAM26DQ5JW98 314 aa18.88■□□□□ 0.61
PRPF40B-208ENST00000548436 NAPEPLDQ6IQ20 393 aa18.88■□□□□ 0.61
PRPF40B-208ENST00000548436 RTN4RL1Q86UN2 441 aaPredicted RBP18.88■□□□□ 0.61
PRPF40B-208ENST00000548436 ZNF280BQ86YH2 543 aa18.88■□□□□ 0.61
PRPF40B-208ENST00000548436 ATPAF2Q8N5M1 289 aa18.88■□□□□ 0.61
PRPF40B-208ENST00000548436 NSMCE1Q8WV22 266 aa18.88■□□□□ 0.61
PRPF40B-208ENST00000548436 FCRL2Q96LA5 508 aaPredicted RBP18.88■□□□□ 0.61
PRPF40B-208ENST00000548436 SORT1Q99523 831 aa18.88■□□□□ 0.61
PRPF40B-208ENST00000548436 SLC39A8Q9C0K1 460 aa18.88■□□□□ 0.61
PRPF40B-208ENST00000548436 IARS2Q9NSE4 1012 aaKnown RBP18.88■□□□□ 0.61
PRPF40B-208ENST00000548436 RPL26L1Q9UNX3 145 aaKnown RBP18.88■□□□□ 0.61
PRPF40B-208ENST00000548436 MAFKO60675 156 aa18.88■□□□□ 0.61
PRPF40B-208ENST00000548436 DDHD2O94830 711 aa18.88■□□□□ 0.61
PRPF40B-208ENST00000548436 ENO1P06733 434 aaKnown RBP18.88■□□□□ 0.61
PRPF40B-208ENST00000548436 PAX3P23760 479 aa18.88■□□□□ 0.61
PRPF40B-208ENST00000548436 CCR1P32246 355 aa18.88■□□□□ 0.61
PRPF40B-208ENST00000548436 ALDH18A1P54886 795 aaKnown RBP18.88■□□□□ 0.61
PRPF40B-208ENST00000548436 IRF9Q00978 393 aa18.88■□□□□ 0.61
PRPF40B-208ENST00000548436 MPP3Q13368 585 aa18.88■□□□□ 0.61
PRPF40B-208ENST00000548436 TLDC1Q6P9B6 456 aa18.88■□□□□ 0.61
PRPF40B-208ENST00000548436 TNS4Q8IZW8 715 aa18.88■□□□□ 0.61
PRPF40B-208ENST00000548436 ZNF784Q8NCA9 323 aaPredicted RBP18.88■□□□□ 0.61
PRPF40B-208ENST00000548436 RILPQ96NA2 401 aa18.88■□□□□ 0.61
PRPF40B-208ENST00000548436 NUDCD1Q96RS6 583 aa18.88■□□□□ 0.61
PRPF40B-208ENST00000548436 CCDC106Q9BWC9 280 aa18.88■□□□□ 0.61
PRPF40B-208ENST00000548436 PCDHB8Q9UN66 801 aa18.88■□□□□ 0.61
PRPF40B-208ENST00000548436 NOD1Q9Y239 953 aa18.88■□□□□ 0.61
PRPF40B-208ENST00000548436 CASP8AP2Q9UKL3 1982 aa18.87■□□□□ 0.61
PRPF40B-208ENST00000548436 SKIP12755 728 aa18.87■□□□□ 0.61
PRPF40B-208ENST00000548436 PRKAR2AP13861 404 aaKnown RBP18.87■□□□□ 0.61
PRPF40B-208ENST00000548436 ELNP15502 786 aa18.87■□□□□ 0.61
PRPF40B-208ENST00000548436 TUBB3Q13509 450 aa18.87■□□□□ 0.61
PRPF40B-208ENST00000548436 ITGA7Q13683 1181 aa18.87■□□□□ 0.61
PRPF40B-208ENST00000548436 CCDC153Q494R4 210 aa18.87■□□□□ 0.61
PRPF40B-208ENST00000548436 SLC39A12Q504Y0 691 aa18.87■□□□□ 0.61
PRPF40B-208ENST00000548436 WDR75Q8IWA0 830 aaKnown RBP18.87■□□□□ 0.61
PRPF40B-208ENST00000548436 FBXO27Q8NI29 283 aa18.87■□□□□ 0.61
PRPF40B-208ENST00000548436 URGCPQ8TCY9 931 aa18.87■□□□□ 0.61
PRPF40B-208ENST00000548436 KIFC1Q9BW19 673 aa18.87■□□□□ 0.61
PRPF40B-208ENST00000548436 OSER1Q9NX31 292 aa18.87■□□□□ 0.61
PRPF40B-208ENST00000548436 DOCK4Q8N1I0 1966 aa18.87■□□□□ 0.61
PRPF40B-208ENST00000548436 A0A096LPK6 155 aa18.86■□□□□ 0.61
PRPF40B-208ENST00000548436 A0A1W2PQH9 124 aa18.86■□□□□ 0.61
PRPF40B-208ENST00000548436 INPPL1O15357 1258 aa18.86■□□□□ 0.61
PRPF40B-208ENST00000548436 SERPINA6P08185 405 aa18.86■□□□□ 0.61
PRPF40B-208ENST00000548436 RPSAP08865 295 aaKnown RBP18.86■□□□□ 0.61
PRPF40B-208ENST00000548436 TPBGLP0DKB5 382 aa18.86■□□□□ 0.61
PRPF40B-208ENST00000548436 RALBP11234 206 aa18.86■□□□□ 0.61
PRPF40B-208ENST00000548436 CPA3P15088 417 aa18.86■□□□□ 0.61
PRPF40B-208ENST00000548436 GNAZP19086 355 aa18.86■□□□□ 0.61
PRPF40B-208ENST00000548436 ITGA9Q13797 1035 aa18.86■□□□□ 0.61
PRPF40B-208ENST00000548436 MAVSQ7Z434 540 aa18.86■□□□□ 0.61
PRPF40B-208ENST00000548436 CLEC14AQ86T13 490 aa18.86■□□□□ 0.61
PRPF40B-208ENST00000548436 LINC00523Q86TU6 105 aa18.86■□□□□ 0.61
PRPF40B-208ENST00000548436 SCN4BQ8IWT1 228 aa18.86■□□□□ 0.61
PRPF40B-208ENST00000548436 TEX9Q8N6V9 391 aa18.86■□□□□ 0.61
PRPF40B-208ENST00000548436 IL12RB2Q99665 862 aa18.86■□□□□ 0.61
PRPF40B-208ENST00000548436 TACO1Q9BSH4 297 aaKnown RBP18.86■□□□□ 0.61
PRPF40B-208ENST00000548436 PNPOQ9NVS9 261 aa18.86■□□□□ 0.61
PRPF40B-208ENST00000548436 TMEM88BA6NKF7 163 aa18.86■□□□□ 0.61
PRPF40B-208ENST00000548436 FGF10O15520 208 aaPredicted RBP18.86■□□□□ 0.61
PRPF40B-208ENST00000548436 PSMD3O43242 534 aa18.86■□□□□ 0.61
PRPF40B-208ENST00000548436 MPOP05164 745 aa18.86■□□□□ 0.61
PRPF40B-208ENST00000548436 GRK2P25098 689 aa18.86■□□□□ 0.61
PRPF40B-208ENST00000548436 CST5P28325 142 aaPredicted RBP18.86■□□□□ 0.61
PRPF40B-208ENST00000548436 CSE1LP55060 971 aaKnown RBP18.86■□□□□ 0.61
PRPF40B-208ENST00000548436 UBAP2LQ14157 1087 aaKnown RBP18.86■□□□□ 0.61
PRPF40B-208ENST00000548436 SDHAF4Q5VUM1 108 aa18.86■□□□□ 0.61
PRPF40B-208ENST00000548436 C14orf80Q86SX3 495 aa18.86■□□□□ 0.61
PRPF40B-208ENST00000548436 ENDOVQ8N8Q3 282 aaKnown RBP18.86■□□□□ 0.61
PRPF40B-208ENST00000548436 OR6Y1Q8NGX8 325 aa18.86■□□□□ 0.61
PRPF40B-208ENST00000548436 KCNV2Q8TDN2 545 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms