RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 POLR2AP24928 1970 aaKnown RBP8.92□□□□□ -0.98
TDP1-204ENST00000545686 COL1A2P08123 1366 aa8.91□□□□□ -0.98
TDP1-204ENST00000545686 A0A087WZ62 844 aa8.91□□□□□ -0.98
TDP1-204ENST00000545686 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.91□□□□□ -0.98
TDP1-204ENST00000545686 F5H423 210 aaPredicted RBP8.91□□□□□ -0.98
TDP1-204ENST00000545686 AP3B1O00203 1094 aa8.91□□□□□ -0.98
TDP1-204ENST00000545686 ACOT8O14734 319 aa8.91□□□□□ -0.98
TDP1-204ENST00000545686 MTSS1O43312 755 aa8.91□□□□□ -0.98
TDP1-204ENST00000545686 DAB1O75553 588 aa8.91□□□□□ -0.98
TDP1-204ENST00000545686 LTFP02788 710 aa8.91□□□□□ -0.98
TDP1-204ENST00000545686 CCDC166P0CW27 439 aa8.91□□□□□ -0.98
TDP1-204ENST00000545686 HSPA1AP0DMV8 641 aaKnown RBP8.91□□□□□ -0.98
TDP1-204ENST00000545686 HSPA1BP0DMV9 641 aaKnown RBP8.91□□□□□ -0.98
TDP1-204ENST00000545686 DNAJB2P25686 324 aa8.91□□□□□ -0.98
TDP1-204ENST00000545686 RANBP1P43487 201 aa8.91□□□□□ -0.98
TDP1-204ENST00000545686 NPY2RP49146 381 aa8.91□□□□□ -0.98
TDP1-204ENST00000545686 IRF9Q00978 393 aa8.91□□□□□ -0.98
TDP1-204ENST00000545686 CEACAM7Q14002 265 aa8.91□□□□□ -0.98
TDP1-204ENST00000545686 MYLK3Q32MK0 819 aa8.91□□□□□ -0.98
TDP1-204ENST00000545686 DCAF4L1Q3SXM0 396 aa8.91□□□□□ -0.98
TDP1-204ENST00000545686 PPM1LQ5SGD2 360 aa8.91□□□□□ -0.98
TDP1-204ENST00000545686 PDZD4Q76G19 769 aaPredicted RBP8.91□□□□□ -0.98
TDP1-204ENST00000545686 BNIPLQ7Z465 357 aa8.91□□□□□ -0.98
TDP1-204ENST00000545686 LILRA2Q8N149 483 aa8.91□□□□□ -0.98
TDP1-204ENST00000545686 TMEM102Q8N9M5 508 aaPredicted RBP8.91□□□□□ -0.98
TDP1-204ENST00000545686 OR52K1Q8NGK4 314 aa8.91□□□□□ -0.98
TDP1-204ENST00000545686 CLEC4CQ8WTT0 213 aa8.91□□□□□ -0.98
TDP1-204ENST00000545686 ITFG2Q969R8 447 aa8.91□□□□□ -0.98
TDP1-204ENST00000545686 CPB2Q96IY4 423 aa8.91□□□□□ -0.98
TDP1-204ENST00000545686 VPS39Q96JC1 886 aa8.91□□□□□ -0.98
TDP1-204ENST00000545686 CNBD2Q96M20 576 aa8.91□□□□□ -0.98
TDP1-204ENST00000545686 CATSPER2Q96P56 530 aa8.91□□□□□ -0.98
TDP1-204ENST00000545686 GPR22Q99680 433 aa8.91□□□□□ -0.98
TDP1-204ENST00000545686 FDXACB1Q9BRP7 624 aaPredicted RBP8.91□□□□□ -0.98
TDP1-204ENST00000545686 GRIP2Q9C0E4 1043 aa8.91□□□□□ -0.98
TDP1-204ENST00000545686 SPATC1LQ9H0A9 340 aa8.91□□□□□ -0.98
TDP1-204ENST00000545686 BRD8Q9H0E9 1235 aa8.91□□□□□ -0.98
TDP1-204ENST00000545686 PRDM12Q9H4Q4 367 aa8.91□□□□□ -0.98
TDP1-204ENST00000545686 COPS7BQ9H9Q2 264 aaPredicted RBP8.91□□□□□ -0.98
TDP1-204ENST00000545686 PIH1D1Q9NWS0 290 aaKnown RBP8.91□□□□□ -0.98
TDP1-204ENST00000545686 SUCOQ9UBS9 1254 aaKnown RBP8.91□□□□□ -0.98
TDP1-204ENST00000545686 NME7Q9Y5B8 376 aa8.91□□□□□ -0.98
TDP1-204ENST00000545686 SNX9Q9Y5X1 595 aa8.91□□□□□ -0.98
TDP1-204ENST00000545686 TRIM38O00635 465 aa8.91□□□□□ -0.98
TDP1-204ENST00000545686 SOCS7O14512 581 aa8.91□□□□□ -0.98
TDP1-204ENST00000545686 NCAM2O15394 837 aa8.91□□□□□ -0.98
TDP1-204ENST00000545686 GRID2O43424 1007 aa8.91□□□□□ -0.98
TDP1-204ENST00000545686 PIGNO95427 931 aa8.91□□□□□ -0.98
TDP1-204ENST00000545686 C8BP07358 591 aa8.91□□□□□ -0.98
TDP1-204ENST00000545686 GRIA4P48058 902 aa8.91□□□□□ -0.98
TDP1-204ENST00000545686 POLD2P49005 469 aa8.91□□□□□ -0.98
TDP1-204ENST00000545686 SULT1E1P49888 294 aa8.91□□□□□ -0.98
TDP1-204ENST00000545686 AIF1P55008 147 aa8.91□□□□□ -0.98
TDP1-204ENST00000545686 TXNL4AP83876 142 aaKnown RBP8.91□□□□□ -0.98
TDP1-204ENST00000545686 ART3Q13508 389 aa8.91□□□□□ -0.98
TDP1-204ENST00000545686 IRAK1BP1Q5VVH5 260 aa8.91□□□□□ -0.98
TDP1-204ENST00000545686 KCTD11Q693B1 232 aa8.91□□□□□ -0.98
TDP1-204ENST00000545686 CES3Q6UWW8 571 aa8.91□□□□□ -0.98
TDP1-204ENST00000545686 EEPD1Q7L9B9 569 aa8.91□□□□□ -0.98
TDP1-204ENST00000545686 SAMD7Q7Z3H4 446 aa8.91□□□□□ -0.98
TDP1-204ENST00000545686 KCNMB4Q86W47 210 aa8.91□□□□□ -0.98
TDP1-204ENST00000545686 CHERPQ8IWX8 916 aaKnown RBP8.91□□□□□ -0.98
TDP1-204ENST00000545686 CRYBG2Q8N1P7 616 aa8.91□□□□□ -0.98
TDP1-204ENST00000545686 PYROXD2Q8N2H3 581 aa8.91□□□□□ -0.98
TDP1-204ENST00000545686 ZFP28Q8NHY6 868 aa8.91□□□□□ -0.98
TDP1-204ENST00000545686 TRPC4APQ8TEL6 797 aa8.91□□□□□ -0.98
TDP1-204ENST00000545686 NLRP7Q8WX94 980 aa8.91□□□□□ -0.98
TDP1-204ENST00000545686 ASB9Q96DX5 294 aa8.91□□□□□ -0.98
TDP1-204ENST00000545686 PRPF18Q99633 342 aaKnown RBP8.91□□□□□ -0.98
TDP1-204ENST00000545686 C1QTNF1Q9BXJ1 281 aa8.91□□□□□ -0.98
TDP1-204ENST00000545686 MAGEB5Q9BZ81 275 aa8.91□□□□□ -0.98
TDP1-204ENST00000545686 WDR55Q9H6Y2 383 aaPredicted RBP8.91□□□□□ -0.98
TDP1-204ENST00000545686 SETD4Q9NVD3 440 aa8.91□□□□□ -0.98
TDP1-204ENST00000545686 SEPT10Q9P0V9 454 aa8.91□□□□□ -0.98
TDP1-204ENST00000545686 KLHL8Q9P2G9 620 aaPredicted RBP8.91□□□□□ -0.98
TDP1-204ENST00000545686 HSFX1Q9UBD0 423 aa8.91□□□□□ -0.98
TDP1-204ENST00000545686 NR2E3Q9Y5X4 410 aa8.91□□□□□ -0.98
TDP1-204ENST00000545686 SQORQ9Y6N5 450 aa8.91□□□□□ -0.98
TDP1-204ENST00000545686 NUP205Q92621 2012 aa8.91□□□□□ -0.98
TDP1-204ENST00000545686 TRPC5OSA6NMA1 111 aa8.9□□□□□ -0.98
TDP1-204ENST00000545686 NEMP1O14524 444 aa8.9□□□□□ -0.98
TDP1-204ENST00000545686 DCLK1O15075 740 aa8.9□□□□□ -0.98
TDP1-204ENST00000545686 TSPAN1O60635 241 aa8.9□□□□□ -0.98
TDP1-204ENST00000545686 DDHD2O94830 711 aa8.9□□□□□ -0.98
TDP1-204ENST00000545686 CHRNGP07510 517 aa8.9□□□□□ -0.98
TDP1-204ENST00000545686 PSMC3P17980 439 aa8.9□□□□□ -0.98
TDP1-204ENST00000545686 TFEBP19484 476 aa8.9□□□□□ -0.98
TDP1-204ENST00000545686 EPHA3P29320 983 aa8.9□□□□□ -0.98
TDP1-204ENST00000545686 GMPRP36959 345 aa8.9□□□□□ -0.98
TDP1-204ENST00000545686 GMPSP49915 693 aaPredicted RBP8.9□□□□□ -0.98
TDP1-204ENST00000545686 USP46P62068 366 aa8.9□□□□□ -0.98
TDP1-204ENST00000545686 ARL13AQ5H913 290 aaPredicted RBP8.9□□□□□ -0.98
TDP1-204ENST00000545686 PID1Q7Z2X4 250 aa8.9□□□□□ -0.98
TDP1-204ENST00000545686 FAM131BQ86XD5 332 aa8.9□□□□□ -0.98
TDP1-204ENST00000545686 CCNYQ8ND76 341 aa8.9□□□□□ -0.98
TDP1-204ENST00000545686 RIN3Q8TB24 985 aa8.9□□□□□ -0.98
TDP1-204ENST00000545686 STYXQ8WUJ0 223 aa8.9□□□□□ -0.98
TDP1-204ENST00000545686 NT5C3BQ969T7 300 aa8.9□□□□□ -0.98
TDP1-204ENST00000545686 PPP1R14BQ96C90 147 aa8.9□□□□□ -0.98
TDP1-204ENST00000545686 MAELQ96JY0 434 aaKnown RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms