RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 STILQ15468 1287 aa15.15■□□□□ 0.02
RTN3-214ENST00000545432 LINC00303Q3SY05 128 aa15.15■□□□□ 0.02
RTN3-214ENST00000545432 KIAA1614Q5VZ46 1190 aa15.15■□□□□ 0.02
RTN3-214ENST00000545432 GCNT7Q6ZNI0 430 aa15.15■□□□□ 0.02
RTN3-214ENST00000545432 HORMAD1Q86X24 394 aa15.15■□□□□ 0.02
RTN3-214ENST00000545432 LGI2Q8N0V4 545 aa15.15■□□□□ 0.02
RTN3-214ENST00000545432 SLC22A18ASQ8N1D0 253 aa15.15■□□□□ 0.02
RTN3-214ENST00000545432 BTN2A3PQ96KV6 586 aa15.15■□□□□ 0.02
RTN3-214ENST00000545432 CAAP1Q9H8G2 361 aa15.15■□□□□ 0.02
RTN3-214ENST00000545432 EVA1BQ9NVM1 165 aa15.15■□□□□ 0.02
RTN3-214ENST00000545432 SALL4Q9UJQ4 1053 aa15.15■□□□□ 0.02
RTN3-214ENST00000545432 NAALADL1Q9UQQ1 740 aa15.15■□□□□ 0.02
RTN3-214ENST00000545432 TLN1Q9Y490 2541 aaKnown RBP15.14■□□□□ 0.01
RTN3-214ENST00000545432 FAM237AA0A1B0GTK4 181 aa15.14■□□□□ 0.01
RTN3-214ENST00000545432 FFAR2O15552 330 aa15.14■□□□□ 0.01
RTN3-214ENST00000545432 TCEA3O75764 348 aa15.14■□□□□ 0.01
RTN3-214ENST00000545432 CSF2P04141 144 aa15.14■□□□□ 0.01
RTN3-214ENST00000545432 ITGB6P18564 788 aa15.14■□□□□ 0.01
RTN3-214ENST00000545432 HNRNPA2B1P22626 353 aaKnown RBP15.14■□□□□ 0.01
RTN3-214ENST00000545432 RBMS1P29558 406 aaKnown RBP15.14■□□□□ 0.01
RTN3-214ENST00000545432 RGS7P49802 495 aa15.14■□□□□ 0.01
RTN3-214ENST00000545432 HNRNPKP61978 463 aaKnown RBP eCLIP15.14■□□□□ 0.01
RTN3-214ENST00000545432 DPYDQ12882 1025 aa15.14■□□□□ 0.01
RTN3-214ENST00000545432 DLG2Q15700 870 aa15.14■□□□□ 0.01
RTN3-214ENST00000545432 SYPL2Q5VXT5 272 aa15.14■□□□□ 0.01
RTN3-214ENST00000545432 CCAR2Q8N163 923 aaKnown RBP15.14■□□□□ 0.01
RTN3-214ENST00000545432 IFI44Q8TCB0 444 aa15.14■□□□□ 0.01
RTN3-214ENST00000545432 MAPK15Q8TD08 544 aa15.14■□□□□ 0.01
RTN3-214ENST00000545432 BMFQ96LC9 184 aa15.14■□□□□ 0.01
RTN3-214ENST00000545432 NOX5Q96PH1 765 aa15.14■□□□□ 0.01
RTN3-214ENST00000545432 ABCG4Q9H172 646 aa15.14■□□□□ 0.01
RTN3-214ENST00000545432 STARD5Q9NSY2 213 aa15.14■□□□□ 0.01
RTN3-214ENST00000545432 NCKIPSDQ9NZQ3 722 aa15.14■□□□□ 0.01
RTN3-214ENST00000545432 ZFR2Q9UPR6 939 aaKnown RBP15.14■□□□□ 0.01
RTN3-214ENST00000545432 CEP83Q9Y592 693 aa15.14■□□□□ 0.01
RTN3-214ENST00000545432 A0A1W2PQU0 124 aa15.13■□□□□ 0.01
RTN3-214ENST00000545432 TCAF2A6NFQ2 919 aa15.13■□□□□ 0.01
RTN3-214ENST00000545432 KCNU1A8MYU2 1149 aa15.13■□□□□ 0.01
RTN3-214ENST00000545432 C1QTNF3-AMACRE9PGA6 284 aa15.13■□□□□ 0.01
RTN3-214ENST00000545432 RNF225M0QZC1 329 aaPredicted RBP15.13■□□□□ 0.01
RTN3-214ENST00000545432 TPP1O14773 563 aa15.13■□□□□ 0.01
RTN3-214ENST00000545432 PMM2O15305 246 aa15.13■□□□□ 0.01
RTN3-214ENST00000545432 SLC31A1O15431 190 aa15.13■□□□□ 0.01
RTN3-214ENST00000545432 SART1O43290 800 aaKnown RBP15.13■□□□□ 0.01
RTN3-214ENST00000545432 CTSLP07711 333 aa15.13■□□□□ 0.01
RTN3-214ENST00000545432 MYF5P13349 255 aa15.13■□□□□ 0.01
RTN3-214ENST00000545432 CMA1P23946 247 aa15.13■□□□□ 0.01
RTN3-214ENST00000545432 TBXAS1P24557 533 aaPredicted RBP15.13■□□□□ 0.01
RTN3-214ENST00000545432 AKT2P31751 481 aa15.13■□□□□ 0.01
RTN3-214ENST00000545432 POM121L1PQ3SYA9 428 aa15.13■□□□□ 0.01
RTN3-214ENST00000545432 TMEM259Q4ZIN3 620 aa15.13■□□□□ 0.01
RTN3-214ENST00000545432 TTC39BQ5VTQ0 682 aaPredicted RBP15.13■□□□□ 0.01
RTN3-214ENST00000545432 RAP1GAP2Q684P5 730 aa15.13■□□□□ 0.01
RTN3-214ENST00000545432 ZCCHC8Q6NZY4 707 aaKnown RBP15.13■□□□□ 0.01
RTN3-214ENST00000545432 CCDC81Q6ZN84 652 aa15.13■□□□□ 0.01
RTN3-214ENST00000545432 TAC4Q86UU9 113 aa15.13■□□□□ 0.01
RTN3-214ENST00000545432 TMIEQ8NEW7 156 aa15.13■□□□□ 0.01
RTN3-214ENST00000545432 ATXN7L3BQ96GX2 97 aa15.13■□□□□ 0.01
RTN3-214ENST00000545432 PPP1R9BQ96SB3 815 aa15.13■□□□□ 0.01
RTN3-214ENST00000545432 SEMA3CQ99985 751 aa15.13■□□□□ 0.01
RTN3-214ENST00000545432 FEM1AQ9BSK4 669 aa15.13■□□□□ 0.01
RTN3-214ENST00000545432 OSBPL2Q9H1P3 480 aa15.13■□□□□ 0.01
RTN3-214ENST00000545432 ACSL6Q9UKU0 697 aa15.13■□□□□ 0.01
RTN3-214ENST00000545432 HS3ST2Q9Y278 367 aa15.13■□□□□ 0.01
RTN3-214ENST00000545432 NYNRINQ9P2P1 1898 aaKnown RBP15.12■□□□□ 0.01
RTN3-214ENST00000545432 UBR5O95071 2799 aaPredicted RBP15.12■□□□□ 0.01
RTN3-214ENST00000545432 SPTY2D1-AS1A0A0U1RR47 76 aa15.12■□□□□ 0.01
RTN3-214ENST00000545432 NME1P15531 152 aaKnown RBP15.12■□□□□ 0.01
RTN3-214ENST00000545432 PDGFRAP16234 1089 aa15.12■□□□□ 0.01
RTN3-214ENST00000545432 PRLRP16471 622 aa15.12■□□□□ 0.01
RTN3-214ENST00000545432 GPD2P43304 727 aa15.12■□□□□ 0.01
RTN3-214ENST00000545432 CCDC15Q0P6D6 951 aa15.12■□□□□ 0.01
RTN3-214ENST00000545432 FZD2Q14332 565 aa15.12■□□□□ 0.01
RTN3-214ENST00000545432 C5orf22Q49AR2 442 aa15.12■□□□□ 0.01
RTN3-214ENST00000545432 ZC3H12AQ5D1E8 599 aaKnown RBP15.12■□□□□ 0.01
RTN3-214ENST00000545432 C3orf38Q5JPI3 329 aa15.12■□□□□ 0.01
RTN3-214ENST00000545432 CHSY1Q86X52 802 aa15.12■□□□□ 0.01
RTN3-214ENST00000545432 SH2D3CQ8N5H7 860 aa15.12■□□□□ 0.01
RTN3-214ENST00000545432 OR52K2Q8NGK3 314 aa15.12■□□□□ 0.01
RTN3-214ENST00000545432 STK32AQ8WU08 396 aa15.12■□□□□ 0.01
RTN3-214ENST00000545432 CCNL2Q96S94 520 aaPredicted RBP15.12■□□□□ 0.01
RTN3-214ENST00000545432 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.12■□□□□ 0.01
RTN3-214ENST00000545432 ATXN7L1Q9ULK2 861 aaPredicted RBP15.12■□□□□ 0.01
RTN3-214ENST00000545432 MAPK8IP1Q9UQF2 711 aa15.12■□□□□ 0.01
RTN3-214ENST00000545432 PCDHGA7Q9Y5G6 932 aa15.12■□□□□ 0.01
RTN3-214ENST00000545432 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.11■□□□□ 0.01
RTN3-214ENST00000545432 PIK3R2O00459 728 aa15.11■□□□□ 0.01
RTN3-214ENST00000545432 CETN3O15182 167 aa15.11■□□□□ 0.01
RTN3-214ENST00000545432 SUV39H1O43463 412 aa15.11■□□□□ 0.01
RTN3-214ENST00000545432 MOCS2O96007 188 aaPredicted RBP15.11■□□□□ 0.01
RTN3-214ENST00000545432 APOEP02649 317 aa15.11■□□□□ 0.01
RTN3-214ENST00000545432 PRR29P0C7W0 189 aa15.11■□□□□ 0.01
RTN3-214ENST00000545432 PFKFB1P16118 471 aa15.11■□□□□ 0.01
RTN3-214ENST00000545432 PDX1P52945 283 aa15.11■□□□□ 0.01
RTN3-214ENST00000545432 ZNF177Q13360 481 aaPredicted RBP15.11■□□□□ 0.01
RTN3-214ENST00000545432 MEA1Q16626 185 aa15.11■□□□□ 0.01
RTN3-214ENST00000545432 COLEC12Q5KU26 742 aa15.11■□□□□ 0.01
RTN3-214ENST00000545432 FBXL22Q6P050 247 aa15.11■□□□□ 0.01
RTN3-214ENST00000545432 GUSBP11Q6P575 273 aa15.11■□□□□ 0.01
RTN3-214ENST00000545432 KYAT3Q6YP21 454 aaKnown RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms