RNA–Protein interactions for RNA: ENST00000545015.1

POLE-222, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 2

Gene POLE, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-222	ENST00000545015	FAM172A	Q8WUF8	416 aa		13.74	□□□□□ -0.21
POLE-222	ENST00000545015	OR8D1	Q8WZ84	308 aa		13.74	□□□□□ -0.21
POLE-222	ENST00000545015	BIRC7	Q96CA5	298 aa		13.74	□□□□□ -0.21
POLE-222	ENST00000545015	RAB6C	Q9H0N0	254 aa		13.74	□□□□□ -0.21
POLE-222	ENST00000545015	MUC3B	Q9H195	1237 aa		13.74	□□□□□ -0.21
POLE-222	ENST00000545015	NEUROG2	Q9H2A3	272 aa		13.74	□□□□□ -0.21
POLE-222	ENST00000545015	KDM4C	Q9H3R0	1056 aa		13.74	□□□□□ -0.21
POLE-222	ENST00000545015	OR12D3	Q9UGF7	316 aa		13.74	□□□□□ -0.21
POLE-222	ENST00000545015	SERGEF	Q9UGK8	458 aa		13.74	□□□□□ -0.21
POLE-222	ENST00000545015	EIF2B4	Q9UI10	523 aa	Known RBP	13.74	□□□□□ -0.21
POLE-222	ENST00000545015	PPM1H	Q9ULR3	514 aa		13.74	□□□□□ -0.21
POLE-222	ENST00000545015		A0A0D9SEW6	157 aa		13.73	□□□□□ -0.21
POLE-222	ENST00000545015		A0A1W2PQJ5	194 aa		13.73	□□□□□ -0.21
POLE-222	ENST00000545015	ZMPSTE24	O75844	475 aa		13.73	□□□□□ -0.21
POLE-222	ENST00000545015	GJB6	O95452	261 aa		13.73	□□□□□ -0.21
POLE-222	ENST00000545015	SERPINC1	P01008	464 aa		13.73	□□□□□ -0.21
POLE-222	ENST00000545015	IGHV4-34	P06331	123 aa		13.73	□□□□□ -0.21
POLE-222	ENST00000545015	ZNF883	P0CG24	379 aa		13.73	□□□□□ -0.21
POLE-222	ENST00000545015	VAV1	P15498	845 aa		13.73	□□□□□ -0.21
POLE-222	ENST00000545015	RHOQ	P17081	205 aa		13.73	□□□□□ -0.21
POLE-222	ENST00000545015	TNFAIP3	P21580	790 aa		13.73	□□□□□ -0.21
POLE-222	ENST00000545015	DRD3	P35462	400 aa		13.73	□□□□□ -0.21
POLE-222	ENST00000545015	ETFB	P38117	255 aa		13.73	□□□□□ -0.21
POLE-222	ENST00000545015	MAPKAPK2	P49137	400 aa		13.73	□□□□□ -0.21
POLE-222	ENST00000545015	CCR5	P51681	352 aa		13.73	□□□□□ -0.21
POLE-222	ENST00000545015	ATXN3	P54252	364 aa	Predicted RBP	13.73	□□□□□ -0.21
POLE-222	ENST00000545015	AIF1	P55008	147 aa		13.73	□□□□□ -0.21
POLE-222	ENST00000545015	TPM4	P67936	248 aa		13.73	□□□□□ -0.21
POLE-222	ENST00000545015	GRIK2	Q13002	908 aa		13.73	□□□□□ -0.21
POLE-222	ENST00000545015	CDO1	Q16878	200 aa		13.73	□□□□□ -0.21
POLE-222	ENST00000545015	FAM46C	Q5VWP2	391 aa		13.73	□□□□□ -0.21
POLE-222	ENST00000545015	E4F1	Q66K89	784 aa	Predicted RBP	13.73	□□□□□ -0.21
POLE-222	ENST00000545015	KIAA0895L	Q68EN5	471 aa		13.73	□□□□□ -0.21
POLE-222	ENST00000545015	PLEKHA7	Q6IQ23	1121 aa		13.73	□□□□□ -0.21
POLE-222	ENST00000545015	TFAP2D	Q7Z6R9	452 aa		13.73	□□□□□ -0.21
POLE-222	ENST00000545015	PHLDB2	Q86SQ0	1253 aa		13.73	□□□□□ -0.21
POLE-222	ENST00000545015	ZCCHC9	Q8N567	271 aa	Known RBP	13.73	□□□□□ -0.21
POLE-222	ENST00000545015	OR2T34	Q8NGX1	318 aa		13.73	□□□□□ -0.21
POLE-222	ENST00000545015	IQCD	Q96DY2	449 aa		13.73	□□□□□ -0.21
POLE-222	ENST00000545015	CNPY3	Q9BT09	278 aa		13.73	□□□□□ -0.21
POLE-222	ENST00000545015	ACE2	Q9BYF1	805 aa	Predicted RBP	13.73	□□□□□ -0.21
POLE-222	ENST00000545015	FSCN3	Q9NQT6	498 aa		13.73	□□□□□ -0.21
POLE-222	ENST00000545015	SEPT11	Q9NVA2	429 aa	Known RBP	13.73	□□□□□ -0.21
POLE-222	ENST00000545015	TMEM248	Q9NWD8	314 aa		13.73	□□□□□ -0.21
POLE-222	ENST00000545015		A0A1W2PP55	124 aa		13.72	□□□□□ -0.21
POLE-222	ENST00000545015		A0A1W2PPC4	97 aa		13.72	□□□□□ -0.21
POLE-222	ENST00000545015	ANKRD62	A6NC57	917 aa		13.72	□□□□□ -0.21
POLE-222	ENST00000545015	LRRC72	A6NJI9	287 aa		13.72	□□□□□ -0.21
POLE-222	ENST00000545015	FAM72C	H0Y354	149 aa		13.72	□□□□□ -0.21
POLE-222	ENST00000545015	CCP110	O43303	1012 aa		13.72	□□□□□ -0.21
POLE-222	ENST00000545015	SNAP91	O60641	907 aa		13.72	□□□□□ -0.21
POLE-222	ENST00000545015	OPHN1	O60890	802 aa		13.72	□□□□□ -0.21
POLE-222	ENST00000545015	SRGAP2	O75044	1071 aa		13.72	□□□□□ -0.21
POLE-222	ENST00000545015	RNASEH2A	O75792	299 aa	Known RBP	13.72	□□□□□ -0.21
POLE-222	ENST00000545015	MT-CO1	P00395	513 aa		13.72	□□□□□ -0.21
POLE-222	ENST00000545015	PLEK	P08567	350 aa	Predicted RBP	13.72	□□□□□ -0.21
POLE-222	ENST00000545015	RRM1	P23921	792 aa		13.72	□□□□□ -0.21
POLE-222	ENST00000545015	PML	P29590	882 aa		13.72	□□□□□ -0.21
POLE-222	ENST00000545015	L1CAM	P32004	1257 aa		13.72	□□□□□ -0.21
POLE-222	ENST00000545015	MAPK8	P45983	427 aa		13.72	□□□□□ -0.21
POLE-222	ENST00000545015	GRIA4	P48058	902 aa		13.72	□□□□□ -0.21
POLE-222	ENST00000545015	PSMD8	P48556	350 aa		13.72	□□□□□ -0.21
POLE-222	ENST00000545015	NOVA1	P51513	510 aa	Known RBP	13.72	□□□□□ -0.21
POLE-222	ENST00000545015	AFF3	P51826	1226 aa	Known RBP	13.72	□□□□□ -0.21
POLE-222	ENST00000545015	RPL7A	P62424	266 aa	Known RBP	13.72	□□□□□ -0.21
POLE-222	ENST00000545015	FANCC	Q00597	558 aa		13.72	□□□□□ -0.21
POLE-222	ENST00000545015	BNC1	Q01954	994 aa		13.72	□□□□□ -0.21
POLE-222	ENST00000545015	GNA12	Q03113	381 aa		13.72	□□□□□ -0.21
POLE-222	ENST00000545015	ASIC2	Q16515	512 aa		13.72	□□□□□ -0.21
POLE-222	ENST00000545015	SKOR2	Q2VWA4	1001 aa	Predicted RBP	13.72	□□□□□ -0.21
POLE-222	ENST00000545015	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	13.72	□□□□□ -0.21
POLE-222	ENST00000545015	FAM72A	Q5TYM5	149 aa		13.72	□□□□□ -0.21
POLE-222	ENST00000545015	SFMBT2	Q5VUG0	894 aa		13.72	□□□□□ -0.21
POLE-222	ENST00000545015	FAM72D	Q6L9T8	149 aa		13.72	□□□□□ -0.21
POLE-222	ENST00000545015	RETSAT	Q6NUM9	610 aa		13.72	□□□□□ -0.21
POLE-222	ENST00000545015	IL27RA	Q6UWB1	636 aa		13.72	□□□□□ -0.21
POLE-222	ENST00000545015	LRSAM1	Q6UWE0	723 aa		13.72	□□□□□ -0.21
POLE-222	ENST00000545015	ZNF571	Q7Z3V5	609 aa	Predicted RBP	13.72	□□□□□ -0.21
POLE-222	ENST00000545015	SLFN11	Q7Z7L1	901 aa		13.72	□□□□□ -0.21
POLE-222	ENST00000545015	LUZP1	Q86V48	1076 aa		13.72	□□□□□ -0.21
POLE-222	ENST00000545015	FAM72B	Q86X60	149 aa		13.72	□□□□□ -0.21
POLE-222	ENST00000545015	PLPP6	Q8IY26	295 aa		13.72	□□□□□ -0.21
POLE-222	ENST00000545015	HDDC3	Q8N4P3	179 aa		13.72	□□□□□ -0.21
POLE-222	ENST00000545015	CCDC185	Q8N715	623 aa		13.72	□□□□□ -0.21
POLE-222	ENST00000545015	SYN2	Q92777	582 aa	Predicted RBP	13.72	□□□□□ -0.21
POLE-222	ENST00000545015	OMD	Q99983	421 aa		13.72	□□□□□ -0.21
POLE-222	ENST00000545015	GTPBP2	Q9BX10	602 aa	Known RBP	13.72	□□□□□ -0.21
POLE-222	ENST00000545015	CEP44	Q9C0F1	390 aa		13.72	□□□□□ -0.21
POLE-222	ENST00000545015	HAUS4	Q9H6D7	363 aa		13.72	□□□□□ -0.21
POLE-222	ENST00000545015	TAS2R14	Q9NYV8	317 aa		13.72	□□□□□ -0.21
POLE-222	ENST00000545015	DOCK4	Q8N1I0	1966 aa		13.71	□□□□□ -0.21
POLE-222	ENST00000545015	WASH4P	A8MWX3	477 aa		13.71	□□□□□ -0.21
POLE-222	ENST00000545015	C1QTNF3-AMACR	E9PGA6	284 aa		13.71	□□□□□ -0.21
POLE-222	ENST00000545015	DDX3X	O00571	662 aa	Known RBP eCLIP	13.71	□□□□□ -0.21
POLE-222	ENST00000545015	LAT	O43561	262 aa		13.71	□□□□□ -0.21
POLE-222	ENST00000545015	ZNF821	O75541	412 aa	Predicted RBP	13.71	□□□□□ -0.21
POLE-222	ENST00000545015	LRIG2	O94898	1065 aa		13.71	□□□□□ -0.21
POLE-222	ENST00000545015	IL1B	P01584	269 aa		13.71	□□□□□ -0.21
POLE-222	ENST00000545015	CD59	P13987	128 aa		13.71	□□□□□ -0.21
POLE-222	ENST00000545015	HTR7	P34969	479 aa		13.71	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms