RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 ZFP14Q9HCL3 533 aa6.59□□□□□ -1.35
CPSF7-222ENST00000544585 TRPV5Q9NQA5 729 aa6.59□□□□□ -1.35
CPSF7-222ENST00000544585 SH3GLB2Q9NR46 395 aa6.59□□□□□ -1.35
CPSF7-222ENST00000544585 HEBP1Q9NRV9 189 aa6.59□□□□□ -1.35
CPSF7-222ENST00000544585 LANCL2Q9NS86 450 aa6.59□□□□□ -1.35
CPSF7-222ENST00000544585 KCND1Q9NSA2 647 aa6.59□□□□□ -1.35
CPSF7-222ENST00000544585 SACM1LQ9NTJ5 587 aa6.59□□□□□ -1.35
CPSF7-222ENST00000544585 TMEM140Q9NV12 185 aa6.59□□□□□ -1.35
CPSF7-222ENST00000544585 DNMT3BQ9UBC3 853 aaKnown RBP6.59□□□□□ -1.35
CPSF7-222ENST00000544585 AFF4Q9UHB7 1163 aaKnown RBP6.59□□□□□ -1.35
CPSF7-222ENST00000544585 CFAP47Q6ZTR5 3102 aa6.59□□□□□ -1.35
CPSF7-222ENST00000544585 DENND4AQ7Z401 1863 aa6.59□□□□□ -1.35
CPSF7-222ENST00000544585 SF3B1O75533 1304 aaKnown RBP eCLIP6.58□□□□□ -1.367e-6■■■■■ 28.7
CPSF7-222ENST00000544585 KLF18A0A0U1RQI7 1052 aa6.58□□□□□ -1.36
CPSF7-222ENST00000544585 ZNF197O14709 1029 aa6.58□□□□□ -1.36
CPSF7-222ENST00000544585 N4BP3O15049 544 aa6.58□□□□□ -1.36
CPSF7-222ENST00000544585 CCL16O15467 120 aa6.58□□□□□ -1.36
CPSF7-222ENST00000544585 EDIL3O43854 480 aa6.58□□□□□ -1.36
CPSF7-222ENST00000544585 MED26O95402 600 aa6.58□□□□□ -1.36
CPSF7-222ENST00000544585 PROS1P07225 676 aa6.58□□□□□ -1.36
CPSF7-222ENST00000544585 GAAP10253 952 aa6.58□□□□□ -1.36
CPSF7-222ENST00000544585 TDGF1P13385 188 aa6.58□□□□□ -1.36
CPSF7-222ENST00000544585 DDCP20711 480 aa6.58□□□□□ -1.36
CPSF7-222ENST00000544585 YBX1P67809 324 aaKnown RBP6.58□□□□□ -1.36
CPSF7-222ENST00000544585 NTHL1P78549 312 aa6.58□□□□□ -1.36
CPSF7-222ENST00000544585 GRIK3Q13003 919 aa6.58□□□□□ -1.36
CPSF7-222ENST00000544585 KRT32Q14532 448 aa6.58□□□□□ -1.36
CPSF7-222ENST00000544585 PSMD5Q16401 504 aa6.58□□□□□ -1.36
CPSF7-222ENST00000544585 LPAL2Q16609 132 aa6.58□□□□□ -1.36
CPSF7-222ENST00000544585 MPEG1Q2M385 716 aa6.58□□□□□ -1.36
CPSF7-222ENST00000544585 FAM171A1Q5VUB5 890 aa6.58□□□□□ -1.36
CPSF7-222ENST00000544585 TMEM200BQ69YZ2 307 aa6.58□□□□□ -1.36
CPSF7-222ENST00000544585 TANGO2Q6ICL3 276 aa6.58□□□□□ -1.36
CPSF7-222ENST00000544585 PRSS55Q6UWB4 352 aaPredicted RBP6.58□□□□□ -1.36
CPSF7-222ENST00000544585 PCGF5Q86SE9 256 aa6.58□□□□□ -1.36
CPSF7-222ENST00000544585 LONP2Q86WA8 852 aa6.58□□□□□ -1.36
CPSF7-222ENST00000544585 C4orf19Q8IY42 314 aa6.58□□□□□ -1.36
CPSF7-222ENST00000544585 SPEM1Q8N4L4 309 aa6.58□□□□□ -1.36
CPSF7-222ENST00000544585 ATP11CQ8NB49 1132 aa6.58□□□□□ -1.36
CPSF7-222ENST00000544585 OR7D4Q8NG98 312 aa6.58□□□□□ -1.36
CPSF7-222ENST00000544585 ITFG1Q8TB96 612 aa6.58□□□□□ -1.36
CPSF7-222ENST00000544585 TBCKQ8TEA7 893 aa6.58□□□□□ -1.36
CPSF7-222ENST00000544585 TMEM143Q96AN5 459 aa6.58□□□□□ -1.36
CPSF7-222ENST00000544585 LOXL4Q96JB6 756 aa6.58□□□□□ -1.36
CPSF7-222ENST00000544585 B3GALT6Q96L58 329 aa6.58□□□□□ -1.36
CPSF7-222ENST00000544585 FAM20AQ96MK3 541 aa6.58□□□□□ -1.36
CPSF7-222ENST00000544585 EIF2AQ9BY44 585 aaKnown RBP6.58□□□□□ -1.36
CPSF7-222ENST00000544585 NDRG2Q9UN36 371 aaKnown RBP6.58□□□□□ -1.36
CPSF7-222ENST00000544585 PLA2G2DQ9UNK4 145 aa6.58□□□□□ -1.36
CPSF7-222ENST00000544585 GPR52Q9Y2T5 361 aa6.58□□□□□ -1.36
CPSF7-222ENST00000544585 DMXL1Q9Y485 3027 aa6.58□□□□□ -1.36
CPSF7-222ENST00000544585 F5P12259 2224 aa6.58□□□□□ -1.36
CPSF7-222ENST00000544585 C2orf16Q68DN1 1984 aa6.58□□□□□ -1.36
CPSF7-222ENST00000544585 MTCL1Q9Y4B5 1905 aaKnown RBP6.58□□□□□ -1.36
CPSF7-222ENST00000544585 ZMYM2Q9UBW7 1377 aa6.57□□□□□ -1.36
CPSF7-222ENST00000544585 A0A1B0GUA9 196 aa6.57□□□□□ -1.36
CPSF7-222ENST00000544585 A0A1W2PPC4 97 aa6.57□□□□□ -1.36
CPSF7-222ENST00000544585 TMEM150BA6NC51 233 aa6.57□□□□□ -1.36
CPSF7-222ENST00000544585 PRRT4C9JH25 899 aa6.57□□□□□ -1.36
CPSF7-222ENST00000544585 F8W810 466 aa6.57□□□□□ -1.36
CPSF7-222ENST00000544585 INO80B-WBP1J3KQ70 363 aa6.57□□□□□ -1.36
CPSF7-222ENST00000544585 TRAPPC3O43617 180 aa6.57□□□□□ -1.36
CPSF7-222ENST00000544585 TSPAN1O60635 241 aa6.57□□□□□ -1.36
CPSF7-222ENST00000544585 PAPSS2O95340 614 aaPredicted RBP6.57□□□□□ -1.36
CPSF7-222ENST00000544585 ZNF806P0C7X5 589 aa6.57□□□□□ -1.36
CPSF7-222ENST00000544585 PSMC3P17980 439 aa6.57□□□□□ -1.36
CPSF7-222ENST00000544585 HOXA6P31267 233 aa6.57□□□□□ -1.36
CPSF7-222ENST00000544585 ELF1P32519 619 aa6.57□□□□□ -1.36
CPSF7-222ENST00000544585 OR1D2P34982 312 aa6.57□□□□□ -1.36
CPSF7-222ENST00000544585 NPEPPSP55786 919 aa6.57□□□□□ -1.36
CPSF7-222ENST00000544585 NLRP5P59047 1200 aa6.57□□□□□ -1.36
CPSF7-222ENST00000544585 FOXD4Q12950 439 aaPredicted RBP6.57□□□□□ -1.36
CPSF7-222ENST00000544585 SLC27A1Q6PCB7 646 aa6.57□□□□□ -1.36
CPSF7-222ENST00000544585 LVRNQ6Q4G3 990 aa6.57□□□□□ -1.36
CPSF7-222ENST00000544585 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.57□□□□□ -1.36
CPSF7-222ENST00000544585 PPP1R3BQ86XI6 285 aa6.57□□□□□ -1.36
CPSF7-222ENST00000544585 BCL6BQ8N143 479 aaPredicted RBP6.57□□□□□ -1.36
CPSF7-222ENST00000544585 PIK3C3Q8NEB9 887 aa6.57□□□□□ -1.36
CPSF7-222ENST00000544585 OR6B3Q8NGW1 331 aa6.57□□□□□ -1.36
CPSF7-222ENST00000544585 KBTBD7Q8WVZ9 684 aa6.57□□□□□ -1.36
CPSF7-222ENST00000544585 TBC1D20Q96BZ9 403 aa6.57□□□□□ -1.36
CPSF7-222ENST00000544585 MSANTD3Q96H12 275 aa6.57□□□□□ -1.36
CPSF7-222ENST00000544585 KIRREL1Q96J84 757 aa6.57□□□□□ -1.36
CPSF7-222ENST00000544585 MPP4Q96JB8 637 aa6.57□□□□□ -1.36
CPSF7-222ENST00000544585 MRGPRX1Q96LB2 322 aa6.57□□□□□ -1.36
CPSF7-222ENST00000544585 ZSWIM3Q96MP5 696 aa6.57□□□□□ -1.36
CPSF7-222ENST00000544585 APOL6Q9BWW8 343 aa6.57□□□□□ -1.36
CPSF7-222ENST00000544585 RNF26Q9BY78 433 aaPredicted RBP6.57□□□□□ -1.36
CPSF7-222ENST00000544585 NFKBIZQ9BYH8 718 aa6.57□□□□□ -1.36
CPSF7-222ENST00000544585 PLA2G2FQ9BZM2 168 aa6.57□□□□□ -1.36
CPSF7-222ENST00000544585 GPR88Q9GZN0 384 aa6.57□□□□□ -1.36
CPSF7-222ENST00000544585 LDAHQ9H6V9 325 aa6.57□□□□□ -1.36
CPSF7-222ENST00000544585 ZNF334Q9HCZ1 680 aaPredicted RBP6.57□□□□□ -1.36
CPSF7-222ENST00000544585 SERHLQ9NQF3 203 aa6.57□□□□□ -1.36
CPSF7-222ENST00000544585 CDC42EP3Q9UKI2 254 aa6.57□□□□□ -1.36
CPSF7-222ENST00000544585 NAP1L2Q9ULW6 460 aaPredicted RBP6.57□□□□□ -1.36
CPSF7-222ENST00000544585 HES2Q9Y543 173 aa6.57□□□□□ -1.36
CPSF7-222ENST00000544585 WDR87Q6ZQQ6 2873 aa6.57□□□□□ -1.36
CPSF7-222ENST00000544585 CNOT1A5YKK6 2376 aaKnown RBP6.57□□□□□ -1.36
CPSF7-222ENST00000544585 MAP1BP46821 2468 aaKnown RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms