RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 SRCP12931 536 aa19.57■□□□□ 0.72
DDX55-211ENST00000544429 GLDCP23378 1020 aa19.57■□□□□ 0.72
DDX55-211ENST00000544429 IL4RP24394 825 aa19.57■□□□□ 0.72
DDX55-211ENST00000544429 PLA2G5P39877 138 aa19.57■□□□□ 0.72
DDX55-211ENST00000544429 P2RY2P41231 377 aa19.57■□□□□ 0.72
DDX55-211ENST00000544429 YBEYP58557 167 aaPredicted RBP19.57■□□□□ 0.72
DDX55-211ENST00000544429 MESDQ14696 234 aa19.57■□□□□ 0.72
DDX55-211ENST00000544429 MAP7D1Q3KQU3 841 aa19.57■□□□□ 0.72
DDX55-211ENST00000544429 PPP6R3Q5H9R7 873 aaPredicted RBP19.57■□□□□ 0.72
DDX55-211ENST00000544429 SLC6A17Q9H1V8 727 aa19.57■□□□□ 0.72
DDX55-211ENST00000544429 RSPH9Q9H1X1 276 aaPredicted RBP19.57■□□□□ 0.72
DDX55-211ENST00000544429 PCDH18Q9HCL0 1135 aa19.57■□□□□ 0.72
DDX55-211ENST00000544429 LUC7LQ9NQ29 371 aaKnown RBP19.57■□□□□ 0.72
DDX55-211ENST00000544429 DONSONQ9NYP3 566 aa19.57■□□□□ 0.72
DDX55-211ENST00000544429 USP36Q9P275 1121 aaKnown RBP19.57■□□□□ 0.72
DDX55-211ENST00000544429 RCOR3Q9P2K3 495 aaPredicted RBP19.57■□□□□ 0.72
DDX55-211ENST00000544429 SALL4Q9UJQ4 1053 aa19.57■□□□□ 0.72
DDX55-211ENST00000544429 EDDM13A0A1B0GTR0 161 aa19.56■□□□□ 0.72
DDX55-211ENST00000544429 GOLGA6L3A6NEY3 463 aa19.56■□□□□ 0.72
DDX55-211ENST00000544429 SIN3BO75182 1162 aa19.56■□□□□ 0.72
DDX55-211ENST00000544429 ZNF821O75541 412 aaPredicted RBP19.56■□□□□ 0.72
DDX55-211ENST00000544429 RPP40O75818 363 aaKnown RBP19.56■□□□□ 0.72
DDX55-211ENST00000544429 IGLV3-19P01714 112 aa19.56■□□□□ 0.72
DDX55-211ENST00000544429 ERCC2P18074 760 aa19.56■□□□□ 0.72
DDX55-211ENST00000544429 CLCN6P51797 869 aa19.56■□□□□ 0.72
DDX55-211ENST00000544429 NDST2P52849 883 aa19.56■□□□□ 0.72
DDX55-211ENST00000544429 SLC20A2Q08357 652 aa19.56■□□□□ 0.72
DDX55-211ENST00000544429 POLD3Q15054 466 aaPredicted RBP19.56■□□□□ 0.72
DDX55-211ENST00000544429 HADHQ16836 314 aaKnown RBP19.56■□□□□ 0.72
DDX55-211ENST00000544429 PARP15Q460N3 678 aa19.56■□□□□ 0.72
DDX55-211ENST00000544429 ATP13A4Q4VNC1 1196 aa19.56■□□□□ 0.72
DDX55-211ENST00000544429 TMPRSS6Q8IU80 811 aa19.56■□□□□ 0.72
DDX55-211ENST00000544429 HSPH1Q92598 858 aa19.56■□□□□ 0.72
DDX55-211ENST00000544429 ZC3H10Q96K80 434 aaKnown RBP19.56■□□□□ 0.72
DDX55-211ENST00000544429 CSPG4P5Q96PW8 444 aa19.56■□□□□ 0.72
DDX55-211ENST00000544429 PRDM16Q9HAZ2 1276 aa19.56■□□□□ 0.72
DDX55-211ENST00000544429 ATP13A1Q9HD20 1204 aa19.56■□□□□ 0.72
DDX55-211ENST00000544429 SLC25A13Q9UJS0 675 aa19.56■□□□□ 0.72
DDX55-211ENST00000544429 TNRC6BQ9UPQ9 1833 aaKnown RBP19.55■□□□□ 0.72
DDX55-211ENST00000544429 CEP192Q8TEP8 1941 aa19.55■□□□□ 0.72
DDX55-211ENST00000544429 GOLGA6L6A8MZA4 724 aa19.55■□□□□ 0.72
DDX55-211ENST00000544429 H3BRJ5 948 aa19.55■□□□□ 0.72
DDX55-211ENST00000544429 DCLK1O15075 740 aa19.55■□□□□ 0.72
DDX55-211ENST00000544429 KDELR3O43731 214 aa19.55■□□□□ 0.72
DDX55-211ENST00000544429 BUB1BO60566 1050 aaPredicted RBP19.55■□□□□ 0.72
DDX55-211ENST00000544429 VAV1P15498 845 aa19.55■□□□□ 0.72
DDX55-211ENST00000544429 NNMTP40261 264 aa19.55■□□□□ 0.72
DDX55-211ENST00000544429 SLC1A1P43005 524 aa19.55■□□□□ 0.72
DDX55-211ENST00000544429 VAV2P52735 878 aa19.55■□□□□ 0.72
DDX55-211ENST00000544429 USP39Q53GS9 565 aaKnown RBP19.55■□□□□ 0.72
DDX55-211ENST00000544429 LRRC38Q5VT99 294 aa19.55■□□□□ 0.72
DDX55-211ENST00000544429 ARHGAP12Q8IWW6 846 aa19.55■□□□□ 0.72
DDX55-211ENST00000544429 NPWQ8N729 165 aa19.55■□□□□ 0.72
DDX55-211ENST00000544429 ACRBPQ8NEB7 543 aa19.55■□□□□ 0.72
DDX55-211ENST00000544429 NKD2Q969F2 451 aaPredicted RBP19.55■□□□□ 0.72
DDX55-211ENST00000544429 ERLEC1Q96DZ1 483 aa19.55■□□□□ 0.72
DDX55-211ENST00000544429 FAM129BQ96TA1 746 aa19.55■□□□□ 0.72
DDX55-211ENST00000544429 SPON2Q9BUD6 331 aa19.55■□□□□ 0.72
DDX55-211ENST00000544429 LACRTQ9GZZ8 138 aa19.55■□□□□ 0.72
DDX55-211ENST00000544429 BCCIPQ9P287 314 aaKnown RBP eCLIP19.55■□□□□ 0.72
DDX55-211ENST00000544429 THADAQ6YHU6 1953 aa19.55■□□□□ 0.72
DDX55-211ENST00000544429 PIEZO1Q92508 2521 aa19.55■□□□□ 0.72
DDX55-211ENST00000544429 K7ERQ8 282 aa19.54■□□□□ 0.72
DDX55-211ENST00000544429 CBX4O00257 560 aa19.54■□□□□ 0.72
DDX55-211ENST00000544429 SMAD6O43541 496 aaKnown RBP19.54■□□□□ 0.72
DDX55-211ENST00000544429 KRT7P08729 469 aa19.54■□□□□ 0.72
DDX55-211ENST00000544429 CD48P09326 243 aa19.54■□□□□ 0.72
DDX55-211ENST00000544429 SERPINH1P50454 418 aaKnown RBP19.54■□□□□ 0.72
DDX55-211ENST00000544429 RPS14P62263 151 aaKnown RBP19.54■□□□□ 0.72
DDX55-211ENST00000544429 ZBTB16Q05516 673 aa19.54■□□□□ 0.72
DDX55-211ENST00000544429 SERINC3Q13530 473 aa19.54■□□□□ 0.72
DDX55-211ENST00000544429 DPYSL3Q14195 570 aa19.54■□□□□ 0.72
DDX55-211ENST00000544429 DLG2Q15700 870 aa19.54■□□□□ 0.72
DDX55-211ENST00000544429 RETSATQ6NUM9 610 aa19.54■□□□□ 0.72
DDX55-211ENST00000544429 LINGO4Q6UY18 593 aa19.54■□□□□ 0.72
DDX55-211ENST00000544429 FAF2Q96CS3 445 aa19.54■□□□□ 0.72
DDX55-211ENST00000544429 HMCESQ96FZ2 354 aa19.54■□□□□ 0.72
DDX55-211ENST00000544429 CD93Q9NPY3 652 aa19.54■□□□□ 0.72
DDX55-211ENST00000544429 ITM2CQ9NQX7 267 aa19.54■□□□□ 0.72
DDX55-211ENST00000544429 MBD1Q9UIS9 605 aaPredicted RBP19.54■□□□□ 0.72
DDX55-211ENST00000544429 DUSP10Q9Y6W6 482 aa19.54■□□□□ 0.72
DDX55-211ENST00000544429 RIF1Q5UIP0 2472 aaKnown RBP19.53■□□□□ 0.72
DDX55-211ENST00000544429 ZFHX2Q9C0A1 2572 aaPredicted RBP19.53■□□□□ 0.72
DDX55-211ENST00000544429 IGHV1OR15-9A0A0B4J2B8 117 aa19.53■□□□□ 0.72
DDX55-211ENST00000544429 PRR23AA6NEV1 266 aa19.53■□□□□ 0.72
DDX55-211ENST00000544429 TMEM110-MUSTN1A8MSY1 372 aa19.53■□□□□ 0.72
DDX55-211ENST00000544429 RASA4BC9J798 803 aa19.53■□□□□ 0.72
DDX55-211ENST00000544429 RASA4O43374 803 aa19.53■□□□□ 0.72
DDX55-211ENST00000544429 ZNF217O75362 1048 aa19.53■□□□□ 0.72
DDX55-211ENST00000544429 IPO7O95373 1038 aaKnown RBP19.53■□□□□ 0.72
DDX55-211ENST00000544429 LMNAP02545 664 aaKnown RBP19.53■□□□□ 0.72
DDX55-211ENST00000544429 ARL4AP40617 200 aa19.53■□□□□ 0.72
DDX55-211ENST00000544429 CDH6P55285 790 aa19.53■□□□□ 0.72
DDX55-211ENST00000544429 SIM2Q14190 667 aaPredicted RBP19.53■□□□□ 0.72
DDX55-211ENST00000544429 ELAVL3Q14576 367 aaKnown RBP19.53■□□□□ 0.72
DDX55-211ENST00000544429 PDK2Q15119 407 aa19.53■□□□□ 0.72
DDX55-211ENST00000544429 IL31Q6EBC2 164 aa19.53■□□□□ 0.72
DDX55-211ENST00000544429 C11orf63Q6NUN7 778 aa19.53■□□□□ 0.72
DDX55-211ENST00000544429 ASCL5Q7RTU5 278 aa19.53■□□□□ 0.72
DDX55-211ENST00000544429 LZTR1Q8N653 840 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms