RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 E7EVH7 732 aa31.09■■■□□ 2.57
CCM2-219ENST00000544363 J3KR12 359 aa31.09■■■□□ 2.57
CCM2-219ENST00000544363 RHOCP08134 193 aa31.09■■■□□ 2.57
CCM2-219ENST00000544363 TCF3P15923 654 aa31.09■■■□□ 2.57
CCM2-219ENST00000544363 CD68P34810 354 aaPredicted RBP31.09■■■□□ 2.57
CCM2-219ENST00000544363 ARL4CP56559 192 aa31.09■■■□□ 2.57
CCM2-219ENST00000544363 CBX2Q14781 532 aaPredicted RBP31.09■■■□□ 2.57
CCM2-219ENST00000544363 HIF1AQ16665 826 aa31.09■■■□□ 2.57
CCM2-219ENST00000544363 CFAP58Q5T655 872 aa31.09■■■□□ 2.57
CCM2-219ENST00000544363 CNTD1Q8N815 330 aa31.09■■■□□ 2.57
CCM2-219ENST00000544363 OR52K2Q8NGK3 314 aa31.09■■■□□ 2.57
CCM2-219ENST00000544363 RIN3Q8TB24 985 aa31.09■■■□□ 2.57
CCM2-219ENST00000544363 PABPC3Q9H361 631 aaKnown RBP31.09■■■□□ 2.57
CCM2-219ENST00000544363 MYO18AQ92614 2054 aaKnown RBP31.08■■■□□ 2.57
CCM2-219ENST00000544363 A0A0D9SEW6 157 aa31.08■■■□□ 2.57
CCM2-219ENST00000544363 PEX11BO96011 259 aa31.08■■■□□ 2.57
CCM2-219ENST00000544363 IL10RBQ08334 325 aa31.08■■■□□ 2.57
CCM2-219ENST00000544363 ALS2CLQ60I27 953 aa31.08■■■□□ 2.57
CCM2-219ENST00000544363 CENPUQ71F23 418 aa31.08■■■□□ 2.57
CCM2-219ENST00000544363 TRMT10CQ7L0Y3 403 aaKnown RBP31.08■■■□□ 2.57
CCM2-219ENST00000544363 GPR149Q86SP6 731 aa31.08■■■□□ 2.57
CCM2-219ENST00000544363 ARID3BQ8IVW6 561 aaPredicted RBP31.08■■■□□ 2.57
CCM2-219ENST00000544363 IQCKQ8N0W5 287 aa31.08■■■□□ 2.57
CCM2-219ENST00000544363 MCUQ8NE86 351 aa31.08■■■□□ 2.57
CCM2-219ENST00000544363 FRMD8Q9BZ67 464 aaPredicted RBP31.08■■■□□ 2.57
CCM2-219ENST00000544363 RSPH14Q9UHP6 348 aa31.08■■■□□ 2.57
CCM2-219ENST00000544363 TNRC18O15417 2968 aaPredicted RBP31.08■■■□□ 2.57
CCM2-219ENST00000544363 CHD5Q8TDI0 1954 aa31.08■■■□□ 2.57
CCM2-219ENST00000544363 F5H423 210 aaPredicted RBP31.07■■■□□ 2.56
CCM2-219ENST00000544363 LINC01565O15544 149 aa31.07■■■□□ 2.56
CCM2-219ENST00000544363 HNRNPDQ14103 355 aaKnown RBP31.07■■■□□ 2.56
CCM2-219ENST00000544363 ZNF77Q15935 545 aa31.07■■■□□ 2.56
CCM2-219ENST00000544363 MPPE1Q53F39 396 aa31.07■■■□□ 2.56
CCM2-219ENST00000544363 CXorf57Q6NSI4 855 aaKnown RBP31.07■■■□□ 2.56
CCM2-219ENST00000544363 ACBD3Q9H3P7 528 aa31.07■■■□□ 2.56
CCM2-219ENST00000544363 CDC42EP4Q9H3Q1 356 aaKnown RBP31.07■■■□□ 2.56
CCM2-219ENST00000544363 EIF2B3Q9NR50 452 aaKnown RBP31.07■■■□□ 2.56
CCM2-219ENST00000544363 CDH23Q9H251 3354 aa31.07■■■□□ 2.56
CCM2-219ENST00000544363 C2orf16Q68DN1 1984 aa31.07■■■□□ 2.56
CCM2-219ENST00000544363 LUC7L3O95232 432 aaKnown RBP31.06■■■□□ 2.56
CCM2-219ENST00000544363 WEE1P30291 646 aa31.06■■■□□ 2.56
CCM2-219ENST00000544363 CDK16Q00536 496 aa31.06■■■□□ 2.56
CCM2-219ENST00000544363 USP4Q13107 963 aa31.06■■■□□ 2.56
CCM2-219ENST00000544363 FNBP1LQ5T0N5 605 aa31.06■■■□□ 2.56
CCM2-219ENST00000544363 MPP7Q5T2T1 576 aa31.06■■■□□ 2.56
CCM2-219ENST00000544363 ANKRD54Q6NXT1 300 aa31.06■■■□□ 2.56
CCM2-219ENST00000544363 ZNF783Q6ZMS7 281 aa31.06■■■□□ 2.56
CCM2-219ENST00000544363 PDIK1LQ8N165 341 aa31.06■■■□□ 2.56
CCM2-219ENST00000544363 CARNMT1Q8N4J0 409 aa31.06■■■□□ 2.56
CCM2-219ENST00000544363 OR7D4Q8NG98 312 aa31.06■■■□□ 2.56
CCM2-219ENST00000544363 EPB41L4BQ9H329 900 aa31.06■■■□□ 2.56
CCM2-219ENST00000544363 SAYSD1Q9NPB0 183 aa31.06■■■□□ 2.56
CCM2-219ENST00000544363 RBM22Q9NW64 420 aaKnown RBP eCLIP31.06■■■□□ 2.56
CCM2-219ENST00000544363 H0Y626 953 aa31.06■■■□□ 2.56
CCM2-219ENST00000544363 EIF3HO15372 352 aaKnown RBP eCLIP31.06■■■□□ 2.56
CCM2-219ENST00000544363 PRAMEF11O60813 436 aa31.06■■■□□ 2.56
CCM2-219ENST00000544363 NFKB1P19838 968 aa31.06■■■□□ 2.56
CCM2-219ENST00000544363 LMAN1P49257 510 aa31.06■■■□□ 2.56
CCM2-219ENST00000544363 RENBPP51606 427 aa31.06■■■□□ 2.56
CCM2-219ENST00000544363 DDI1Q8WTU0 396 aa31.06■■■□□ 2.56
CCM2-219ENST00000544363 NSMCE1Q8WV22 266 aa31.06■■■□□ 2.56
CCM2-219ENST00000544363 ZNF419Q96HQ0 510 aaPredicted RBP31.06■■■□□ 2.56
CCM2-219ENST00000544363 APOL5Q9BWW9 433 aa31.06■■■□□ 2.56
CCM2-219ENST00000544363 LMCD1Q9NZU5 365 aa31.06■■■□□ 2.56
CCM2-219ENST00000544363 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP31.05■■■□□ 2.56
CCM2-219ENST00000544363 GOLGA6BA6NDN3 693 aa31.05■■■□□ 2.56
CCM2-219ENST00000544363 FSHRP23945 695 aa31.05■■■□□ 2.56
CCM2-219ENST00000544363 MAGEA4P43358 317 aa31.05■■■□□ 2.56
CCM2-219ENST00000544363 PDIA2Q13087 525 aaKnown RBP31.05■■■□□ 2.56
CCM2-219ENST00000544363 IL31Q6EBC2 164 aa31.05■■■□□ 2.56
CCM2-219ENST00000544363 SYCE2Q6PIF2 218 aa31.05■■■□□ 2.56
CCM2-219ENST00000544363 ZIM3Q96PE6 472 aa31.05■■■□□ 2.56
CCM2-219ENST00000544363 GORASP1Q9BQQ3 440 aa31.05■■■□□ 2.56
CCM2-219ENST00000544363 E7ESA3 106 aa31.04■■■□□ 2.56
CCM2-219ENST00000544363 ALOX15BO15296 676 aa31.04■■■□□ 2.56
CCM2-219ENST00000544363 CACNG3O60359 315 aa31.04■■■□□ 2.56
CCM2-219ENST00000544363 NEBLO76041 1014 aa31.04■■■□□ 2.56
CCM2-219ENST00000544363 HOXD9P28356 352 aaPredicted RBP31.04■■■□□ 2.56
CCM2-219ENST00000544363 ETFBP38117 255 aa31.04■■■□□ 2.56
CCM2-219ENST00000544363 CBLBQ13191 982 aa31.04■■■□□ 2.56
CCM2-219ENST00000544363 PDCD7Q8N8D1 485 aaKnown RBP31.04■■■□□ 2.56
CCM2-219ENST00000544363 PABPC5Q96DU9 382 aaKnown RBP31.04■■■□□ 2.56
CCM2-219ENST00000544363 SERPINB12Q96P63 405 aa31.04■■■□□ 2.56
CCM2-219ENST00000544363 KIF9Q9HAQ2 790 aa31.04■■■□□ 2.56
CCM2-219ENST00000544363 GLOD4Q9HC38 313 aa31.04■■■□□ 2.56
CCM2-219ENST00000544363 TBC1D14Q9P2M4 693 aa31.04■■■□□ 2.56
CCM2-219ENST00000544363 PLAAQ9Y263 795 aa31.04■■■□□ 2.56
CCM2-219ENST00000544363 RIPK2O43353 540 aa31.03■■■□□ 2.56
CCM2-219ENST00000544363 HLA-DQB2P05538 268 aa31.03■■■□□ 2.56
CCM2-219ENST00000544363 ADAM15Q13444 863 aa31.03■■■□□ 2.56
CCM2-219ENST00000544363 MSS51Q4VC12 460 aa31.03■■■□□ 2.56
CCM2-219ENST00000544363 MARC1Q5VT66 337 aa31.03■■■□□ 2.56
CCM2-219ENST00000544363 RNF219Q5W0B1 726 aaPredicted RBP31.03■■■□□ 2.56
CCM2-219ENST00000544363 TPGS1Q6ZTW0 290 aa31.03■■■□□ 2.56
CCM2-219ENST00000544363 TEX26Q8N6G2 289 aa31.03■■■□□ 2.56
CCM2-219ENST00000544363 CELF5Q8N6W0 485 aaKnown RBP31.03■■■□□ 2.56
CCM2-219ENST00000544363 ZNF599Q96NL3 588 aa31.03■■■□□ 2.56
CCM2-219ENST00000544363 SPON2Q9BUD6 331 aa31.03■■■□□ 2.56
CCM2-219ENST00000544363 ACE2Q9BYF1 805 aaPredicted RBP31.03■■■□□ 2.56
CCM2-219ENST00000544363 PDFQ9HBH1 243 aa31.03■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms