RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 LRG1P02750 347 aa20.24■□□□□ 0.83
COPS7A-218ENST00000543939 HLA-DQB2P05538 268 aa20.24■□□□□ 0.83
COPS7A-218ENST00000543939 C8AP07357 584 aa20.24■□□□□ 0.83
COPS7A-218ENST00000543939 MBL2P11226 248 aaPredicted RBP20.24■□□□□ 0.83
COPS7A-218ENST00000543939 DNAJB1P25685 340 aa20.24■□□□□ 0.83
COPS7A-218ENST00000543939 MGAT1P26572 445 aa20.24■□□□□ 0.83
COPS7A-218ENST00000543939 OR1E1P30953 314 aa20.24■□□□□ 0.83
COPS7A-218ENST00000543939 SESN2P58004 480 aaPredicted RBP20.24■□□□□ 0.83
COPS7A-218ENST00000543939 YBEYP58557 167 aaPredicted RBP20.24■□□□□ 0.83
COPS7A-218ENST00000543939 NR1H3Q13133 447 aa20.24■□□□□ 0.83
COPS7A-218ENST00000543939 OLIG2Q13516 323 aa20.24■□□□□ 0.83
COPS7A-218ENST00000543939 PARP15Q460N3 678 aa20.24■□□□□ 0.83
COPS7A-218ENST00000543939 STEAP4Q687X5 459 aa20.24■□□□□ 0.83
COPS7A-218ENST00000543939 PRPF39Q86UA1 669 aaKnown RBP20.24■□□□□ 0.83
COPS7A-218ENST00000543939 TMC8Q8IU68 726 aa20.24■□□□□ 0.83
COPS7A-218ENST00000543939 CFAP52Q8N1V2 620 aa20.24■□□□□ 0.83
COPS7A-218ENST00000543939 MRPL43Q8N983 215 aaKnown RBP20.24■□□□□ 0.83
COPS7A-218ENST00000543939 OR52K1Q8NGK4 314 aa20.24■□□□□ 0.83
COPS7A-218ENST00000543939 SELENOSQ9BQE4 189 aa20.24■□□□□ 0.83
COPS7A-218ENST00000543939 MTIF3Q9H2K0 278 aaKnown RBP20.24■□□□□ 0.83
COPS7A-218ENST00000543939 LRRC40Q9H9A6 602 aa20.24■□□□□ 0.83
COPS7A-218ENST00000543939 RBM22Q9NW64 420 aaKnown RBP eCLIP20.24■□□□□ 0.83
COPS7A-218ENST00000543939 AGO1Q9UL18 857 aaKnown RBP20.24■□□□□ 0.83
COPS7A-218ENST00000543939 RWDD3Q9Y3V2 267 aa20.24■□□□□ 0.83
COPS7A-218ENST00000543939 ACTL7BQ9Y614 415 aa20.24■□□□□ 0.83
COPS7A-218ENST00000543939 HIDE1A8MVS5 230 aa20.23■□□□□ 0.83
COPS7A-218ENST00000543939 J3KR12 359 aa20.23■□□□□ 0.83
COPS7A-218ENST00000543939 PIAS1O75925 651 aa20.23■□□□□ 0.83
COPS7A-218ENST00000543939 IRF1P10914 325 aa20.23■□□□□ 0.83
COPS7A-218ENST00000543939 CREB1P16220 341 aa20.23■□□□□ 0.83
COPS7A-218ENST00000543939 PRKCHP24723 683 aa20.23■□□□□ 0.83
COPS7A-218ENST00000543939 HNRNPDQ14103 355 aaKnown RBP20.23■□□□□ 0.83
COPS7A-218ENST00000543939 POLD3Q15054 466 aaPredicted RBP20.23■□□□□ 0.83
COPS7A-218ENST00000543939 KBTBD12Q3ZCT8 623 aa20.23■□□□□ 0.83
COPS7A-218ENST00000543939 PLPP4Q5VZY2 271 aa20.23■□□□□ 0.83
COPS7A-218ENST00000543939 GAREM2Q75VX8 874 aa20.23■□□□□ 0.83
COPS7A-218ENST00000543939 TRABD2AQ86V40 505 aa20.23■□□□□ 0.83
COPS7A-218ENST00000543939 GSDMBQ8TAX9 411 aa20.23■□□□□ 0.83
COPS7A-218ENST00000543939 DCAKDQ8WVC6 231 aa20.23■□□□□ 0.83
COPS7A-218ENST00000543939 POF1BQ8WVV4 589 aa20.23■□□□□ 0.83
COPS7A-218ENST00000543939 MRRFQ96E11 262 aaKnown RBP20.23■□□□□ 0.83
COPS7A-218ENST00000543939 PRICKLE1Q96MT3 831 aaPredicted RBP20.23■□□□□ 0.83
COPS7A-218ENST00000543939 SLC22A12Q96S37 553 aa20.23■□□□□ 0.83
COPS7A-218ENST00000543939 TRIM56Q9BRZ2 755 aaKnown RBP20.23■□□□□ 0.83
COPS7A-218ENST00000543939 TRPC7Q9HCX4 862 aa20.23■□□□□ 0.83
COPS7A-218ENST00000543939 PIH1D1Q9NWS0 290 aaKnown RBP20.23■□□□□ 0.83
COPS7A-218ENST00000543939 ZFP37Q9Y6Q3 630 aaPredicted RBP20.23■□□□□ 0.83
COPS7A-218ENST00000543939 H3BNC9 293 aa20.22■□□□□ 0.83
COPS7A-218ENST00000543939 USP12O75317 370 aa20.22■□□□□ 0.83
COPS7A-218ENST00000543939 GABRR2P28476 465 aa20.22■□□□□ 0.83
COPS7A-218ENST00000543939 MSH2P43246 934 aa20.22■□□□□ 0.83
COPS7A-218ENST00000543939 CDH4P55283 916 aa20.22■□□□□ 0.83
COPS7A-218ENST00000543939 SERINC3Q13530 473 aa20.22■□□□□ 0.83
COPS7A-218ENST00000543939 RABGAP1LQ5R372 815 aa20.22■□□□□ 0.83
COPS7A-218ENST00000543939 ADGRF1Q5T601 910 aa20.22■□□□□ 0.83
COPS7A-218ENST00000543939 CCNJLQ8IV13 435 aa20.22■□□□□ 0.83
COPS7A-218ENST00000543939 HS6ST3Q8IZP7 471 aa20.22■□□□□ 0.83
COPS7A-218ENST00000543939 MDM1Q8TC05 714 aa20.22■□□□□ 0.83
COPS7A-218ENST00000543939 SLC44A1Q8WWI5 657 aa20.22■□□□□ 0.83
COPS7A-218ENST00000543939 CYP2S1Q96SQ9 504 aa20.22■□□□□ 0.83
COPS7A-218ENST00000543939 C17orf80Q9BSJ5 609 aa20.22■□□□□ 0.83
COPS7A-218ENST00000543939 SYBUQ9NX95 663 aa20.22■□□□□ 0.83
COPS7A-218ENST00000543939 STOML2Q9UJZ1 356 aa20.22■□□□□ 0.83
COPS7A-218ENST00000543939 AAR2Q9Y312 384 aaKnown RBP20.22■□□□□ 0.83
COPS7A-218ENST00000543939 ANXA9O76027 345 aa20.22■□□□□ 0.83
COPS7A-218ENST00000543939 GLUD1P00367 558 aa20.22■□□□□ 0.83
COPS7A-218ENST00000543939 RENBPP51606 427 aa20.22■□□□□ 0.83
COPS7A-218ENST00000543939 CRADDP78560 199 aa20.22■□□□□ 0.83
COPS7A-218ENST00000543939 PPARDQ03181 441 aa20.22■□□□□ 0.83
COPS7A-218ENST00000543939 UBE3AQ05086 875 aa20.22■□□□□ 0.83
COPS7A-218ENST00000543939 IL10RBQ08334 325 aa20.22■□□□□ 0.83
COPS7A-218ENST00000543939 TXNDC8Q6A555 127 aa20.22■□□□□ 0.83
COPS7A-218ENST00000543939 CYS1Q717R9 158 aa20.22■□□□□ 0.83
COPS7A-218ENST00000543939 ARL14EPQ8N8R7 260 aaPredicted RBP20.22■□□□□ 0.83
COPS7A-218ENST00000543939 PPP1R2P1Q96PQ5 205 aa20.22■□□□□ 0.83
COPS7A-218ENST00000543939 NAT9Q9BTE0 207 aa20.22■□□□□ 0.83
COPS7A-218ENST00000543939 SP110Q9HB58 689 aa20.22■□□□□ 0.83
COPS7A-218ENST00000543939 TLR9Q9NR96 1032 aa20.22■□□□□ 0.83
COPS7A-218ENST00000543939 SMPD4Q9NXE4 827 aa20.22■□□□□ 0.83
COPS7A-218ENST00000543939 UBP1Q9NZI7 540 aa20.22■□□□□ 0.83
COPS7A-218ENST00000543939 C5orf67F2Z3F1 127 aa20.21■□□□□ 0.83
COPS7A-218ENST00000543939 LATS1O95835 1130 aa20.21■□□□□ 0.83
COPS7A-218ENST00000543939 CHN1P15882 459 aa20.21■□□□□ 0.83
COPS7A-218ENST00000543939 PGAM1P18669 254 aa20.21■□□□□ 0.83
COPS7A-218ENST00000543939 HDCP19113 662 aa20.21■□□□□ 0.83
COPS7A-218ENST00000543939 LSP1P33241 339 aa20.21■□□□□ 0.83
COPS7A-218ENST00000543939 ACVRL1P37023 503 aa20.21■□□□□ 0.83
COPS7A-218ENST00000543939 RPS24P62847 133 aaKnown RBP20.21■□□□□ 0.83
COPS7A-218ENST00000543939 SMAD3P84022 425 aaKnown RBP20.21■□□□□ 0.83
COPS7A-218ENST00000543939 TNK2Q07912 1038 aa20.21■□□□□ 0.83
COPS7A-218ENST00000543939 NAPEPLDQ6IQ20 393 aa20.21■□□□□ 0.83
COPS7A-218ENST00000543939 CASC4Q6P4E1 433 aa20.21■□□□□ 0.83
COPS7A-218ENST00000543939 SRRM1Q8IYB3 904 aaKnown RBP20.21■□□□□ 0.83
COPS7A-218ENST00000543939 TEX26Q8N6G2 289 aa20.21■□□□□ 0.83
COPS7A-218ENST00000543939 SPATA22Q8NHS9 363 aa20.21■□□□□ 0.83
COPS7A-218ENST00000543939 ADAMTS19Q8TE59 1207 aa20.21■□□□□ 0.83
COPS7A-218ENST00000543939 CENPTQ96BT3 561 aa20.21■□□□□ 0.83
COPS7A-218ENST00000543939 DDX50Q9BQ39 737 aaKnown RBP20.21■□□□□ 0.83
COPS7A-218ENST00000543939 LBHD1Q9BQE6 289 aaPredicted RBP20.21■□□□□ 0.83
COPS7A-218ENST00000543939 MOCS1Q9NZB8 636 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms