RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 CLDN3O15551 220 aa9.05□□□□□ -0.96
VPS13D-212ENST00000543766 GGPS1O95749 300 aa9.05□□□□□ -0.96
VPS13D-212ENST00000543766 HK1P19367 917 aa9.05□□□□□ -0.96
VPS13D-212ENST00000543766 FNTBP49356 437 aa9.05□□□□□ -0.96
VPS13D-212ENST00000543766 PGDP52209 483 aa9.05□□□□□ -0.96
VPS13D-212ENST00000543766 TSTA3Q13630 321 aaPredicted RBP9.05□□□□□ -0.96
VPS13D-212ENST00000543766 MEA1Q16626 185 aa9.05□□□□□ -0.96
VPS13D-212ENST00000543766 PMF1Q6P1K2 205 aa9.05□□□□□ -0.96
VPS13D-212ENST00000543766 HEATR3Q7Z4Q2 680 aa9.05□□□□□ -0.96
VPS13D-212ENST00000543766 ATCAYQ86WG3 371 aa9.05□□□□□ -0.96
VPS13D-212ENST00000543766 SLC41A1Q8IVJ1 513 aa9.05□□□□□ -0.96
VPS13D-212ENST00000543766 OR52K1Q8NGK4 314 aa9.05□□□□□ -0.96
VPS13D-212ENST00000543766 ZNF671Q8TAW3 534 aa9.05□□□□□ -0.96
VPS13D-212ENST00000543766 LINGO1Q96FE5 620 aa9.05□□□□□ -0.96
VPS13D-212ENST00000543766 KCNC2Q96PR1 638 aa9.05□□□□□ -0.96
VPS13D-212ENST00000543766 IDI2Q9BXS1 227 aa9.05□□□□□ -0.96
VPS13D-212ENST00000543766 PLGRKTQ9HBL7 147 aa9.05□□□□□ -0.96
VPS13D-212ENST00000543766 CRTAC1Q9NQ79 661 aa9.05□□□□□ -0.96
VPS13D-212ENST00000543766 THUMPD1Q9NXG2 353 aaKnown RBP9.05□□□□□ -0.96
VPS13D-212ENST00000543766 TAS2R7Q9NYW3 318 aa9.05□□□□□ -0.96
VPS13D-212ENST00000543766 NOVA2Q9UNW9 492 aaKnown RBP9.05□□□□□ -0.96
VPS13D-212ENST00000543766 AKT3Q9Y243 479 aa9.05□□□□□ -0.96
VPS13D-212ENST00000543766 CSADQ9Y600 493 aa9.05□□□□□ -0.96
VPS13D-212ENST00000543766 ABCC12Q96J65 1359 aa9.04□□□□□ -0.96
VPS13D-212ENST00000543766 ERVV-2B6SEH9 535 aa9.04□□□□□ -0.96
VPS13D-212ENST00000543766 GAS2O43903 313 aaKnown RBP9.04□□□□□ -0.96
VPS13D-212ENST00000543766 SRCP12931 536 aa9.04□□□□□ -0.96
VPS13D-212ENST00000543766 GNAZP19086 355 aa9.04□□□□□ -0.96
VPS13D-212ENST00000543766 HNF1AP20823 631 aa9.04□□□□□ -0.96
VPS13D-212ENST00000543766 CCND2P30279 289 aa9.04□□□□□ -0.96
VPS13D-212ENST00000543766 SERPINB5P36952 375 aa9.04□□□□□ -0.96
VPS13D-212ENST00000543766 SLC3A1Q07837 685 aa9.04□□□□□ -0.96
VPS13D-212ENST00000543766 TGFBIQ15582 683 aa9.04□□□□□ -0.96
VPS13D-212ENST00000543766 TMEM108Q6UXF1 575 aa9.04□□□□□ -0.96
VPS13D-212ENST00000543766 TMC3Q7Z5M5 1100 aa9.04□□□□□ -0.96
VPS13D-212ENST00000543766 GDPD5Q8WTR4 605 aa9.04□□□□□ -0.96
VPS13D-212ENST00000543766 TPD52L3Q96J77 140 aa9.04□□□□□ -0.96
VPS13D-212ENST00000543766 ZNF594Q96JF6 807 aaPredicted RBP9.04□□□□□ -0.96
VPS13D-212ENST00000543766 C17orf62Q9BQA9 187 aa9.04□□□□□ -0.96
VPS13D-212ENST00000543766 FBRSQ9HAH7 460 aa9.04□□□□□ -0.96
VPS13D-212ENST00000543766 OR6C2Q9NZP2 312 aa9.04□□□□□ -0.96
VPS13D-212ENST00000543766 STX18Q9P2W9 335 aaKnown RBP9.04□□□□□ -0.96
VPS13D-212ENST00000543766 PKD1L3Q7Z443 1732 aa9.04□□□□□ -0.96
VPS13D-212ENST00000543766 A8MV72 311 aaPredicted RBP9.04□□□□□ -0.96
VPS13D-212ENST00000543766 SGCEO43556 437 aa9.04□□□□□ -0.96
VPS13D-212ENST00000543766 EFCAB14O75071 495 aa9.04□□□□□ -0.96
VPS13D-212ENST00000543766 BCAS2O75934 225 aaPredicted RBP9.04□□□□□ -0.96
VPS13D-212ENST00000543766 CYP21A2P08686 494 aa9.04□□□□□ -0.96
VPS13D-212ENST00000543766 LIG4P49917 911 aa9.04□□□□□ -0.96
VPS13D-212ENST00000543766 CALCRLQ16602 461 aa9.04□□□□□ -0.96
VPS13D-212ENST00000543766 KYNUQ16719 465 aa9.04□□□□□ -0.96
VPS13D-212ENST00000543766 APOA5Q6Q788 366 aa9.04□□□□□ -0.96
VPS13D-212ENST00000543766 IP6K1Q92551 441 aa9.04□□□□□ -0.96
VPS13D-212ENST00000543766 ANKRD2Q9GZV1 360 aa9.04□□□□□ -0.96
VPS13D-212ENST00000543766 METTL5Q9NRN9 209 aaKnown RBP9.04□□□□□ -0.96
VPS13D-212ENST00000543766 CHTOPQ9Y3Y2 248 aaKnown RBP9.04□□□□□ -0.96
VPS13D-212ENST00000543766 ZNF609O15014 1411 aa9.04□□□□□ -0.96
VPS13D-212ENST00000543766 MYH2Q9UKX2 1941 aa9.04□□□□□ -0.96
VPS13D-212ENST00000543766 LOC100506127A0A0U1RQW1 187 aa9.04□□□□□ -0.96
VPS13D-212ENST00000543766 A0A1W2PPH5 198 aa9.04□□□□□ -0.96
VPS13D-212ENST00000543766 SH3PXD2BA1X283 911 aa9.04□□□□□ -0.96
VPS13D-212ENST00000543766 CCT8L1PA6NM43 557 aa9.04□□□□□ -0.96
VPS13D-212ENST00000543766 H0YAE9 185 aa9.04□□□□□ -0.96
VPS13D-212ENST00000543766 OR6B1O95007 311 aa9.04□□□□□ -0.96
VPS13D-212ENST00000543766 ALX3O95076 343 aa9.04□□□□□ -0.96
VPS13D-212ENST00000543766 STAU1O95793 577 aaKnown RBP9.04□□□□□ -0.96
VPS13D-212ENST00000543766 IL1BP01584 269 aa9.04□□□□□ -0.96
VPS13D-212ENST00000543766 KRT1P04264 644 aa9.04□□□□□ -0.96
VPS13D-212ENST00000543766 PROS1P07225 676 aa9.04□□□□□ -0.96
VPS13D-212ENST00000543766 ANXA6P08133 673 aa9.04□□□□□ -0.96
VPS13D-212ENST00000543766 EIF2AK2P19525 551 aaKnown RBP9.04□□□□□ -0.96
VPS13D-212ENST00000543766 PDIA3P30101 505 aaKnown RBP9.04□□□□□ -0.96
VPS13D-212ENST00000543766 NR4A2P43354 598 aa9.04□□□□□ -0.96
VPS13D-212ENST00000543766 KCNC3Q14003 757 aa9.04□□□□□ -0.96
VPS13D-212ENST00000543766 GRM7Q14831 915 aa9.04□□□□□ -0.96
VPS13D-212ENST00000543766 KPNB1Q14974 876 aaKnown RBP9.04□□□□□ -0.96
VPS13D-212ENST00000543766 FAM160B1Q5W0V3 765 aa9.04□□□□□ -0.96
VPS13D-212ENST00000543766 JADE1Q6IE81 842 aa9.04□□□□□ -0.96
VPS13D-212ENST00000543766 CCDC197Q8NCU1 140 aa9.04□□□□□ -0.96
VPS13D-212ENST00000543766 AKR7LQ8NHP1 331 aa9.04□□□□□ -0.96
VPS13D-212ENST00000543766 ADAM32Q8TC27 787 aa9.04□□□□□ -0.96
VPS13D-212ENST00000543766 SLC2A14Q8TDB8 520 aa9.04□□□□□ -0.96
VPS13D-212ENST00000543766 PYROXD1Q8WU10 500 aa9.04□□□□□ -0.96
VPS13D-212ENST00000543766 NCSTNQ92542 709 aa9.04□□□□□ -0.96
VPS13D-212ENST00000543766 ADIPOR1Q96A54 375 aa9.04□□□□□ -0.96
VPS13D-212ENST00000543766 MTERF3Q96E29 417 aa9.04□□□□□ -0.96
VPS13D-212ENST00000543766 RMND5BQ96G75 393 aaPredicted RBP9.04□□□□□ -0.96
VPS13D-212ENST00000543766 APOPT1Q96IL0 206 aa9.04□□□□□ -0.96
VPS13D-212ENST00000543766 HAPLN3Q96S86 360 aa9.04□□□□□ -0.96
VPS13D-212ENST00000543766 STRBPQ96SI9 672 aaKnown RBP9.04□□□□□ -0.96
VPS13D-212ENST00000543766 SUV39H2Q9H5I1 410 aa9.04□□□□□ -0.96
VPS13D-212ENST00000543766 ARGFXA6NJG6 315 aa9.03□□□□□ -0.96
VPS13D-212ENST00000543766 DDX39AO00148 427 aaKnown RBP9.03□□□□□ -0.96
VPS13D-212ENST00000543766 PIK3CDO00329 1044 aa9.03□□□□□ -0.96
VPS13D-212ENST00000543766 PER2O15055 1255 aa9.03□□□□□ -0.96
VPS13D-212ENST00000543766 ZNF185O15231 689 aa9.03□□□□□ -0.96
VPS13D-212ENST00000543766 DDX3YO15523 660 aaKnown RBP9.03□□□□□ -0.96
VPS13D-212ENST00000543766 GAS7O60861 476 aa9.03□□□□□ -0.96
VPS13D-212ENST00000543766 WFS1O76024 890 aa9.03□□□□□ -0.96
VPS13D-212ENST00000543766 NDUFA10O95299 355 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms