RNA–Protein interactions for RNA: ENST00000543537.5

COPS7A-217, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-217ENST00000543537 ARFGAP2Q8N6H7 521 aa11.8□□□□□ -0.52
COPS7A-217ENST00000543537 PLD5Q8N7P1 536 aa11.8□□□□□ -0.52
COPS7A-217ENST00000543537 TTC8Q8TAM2 541 aa11.8□□□□□ -0.52
COPS7A-217ENST00000543537 ACTL9Q8TC94 416 aa11.8□□□□□ -0.52
COPS7A-217ENST00000543537 OTUB2Q96DC9 234 aa11.8□□□□□ -0.52
COPS7A-217ENST00000543537 RTP4Q96DX8 246 aa11.8□□□□□ -0.52
COPS7A-217ENST00000543537 ZFRQ96KR1 1074 aaKnown RBP11.8□□□□□ -0.52
COPS7A-217ENST00000543537 C1orf74Q96LT6 269 aa11.8□□□□□ -0.52
COPS7A-217ENST00000543537 VAT1Q99536 393 aa11.8□□□□□ -0.52
COPS7A-217ENST00000543537 P2RY13Q9BPV8 354 aa11.8□□□□□ -0.52
COPS7A-217ENST00000543537 SNRNP25Q9BV90 132 aaKnown RBP11.8□□□□□ -0.52
COPS7A-217ENST00000543537 DHX35Q9H5Z1 703 aaKnown RBP11.8□□□□□ -0.52
COPS7A-217ENST00000543537 FAM204AQ9H8W3 233 aa11.8□□□□□ -0.52
COPS7A-217ENST00000543537 FBRSL1Q9HCM7 1045 aaKnown RBP11.8□□□□□ -0.52
COPS7A-217ENST00000543537 TLR8Q9NR97 1041 aaKnown RBP11.8□□□□□ -0.52
COPS7A-217ENST00000543537 ZDHHC18Q9NUE0 388 aa11.8□□□□□ -0.52
COPS7A-217ENST00000543537 HAUS2Q9NVX0 235 aa11.8□□□□□ -0.52
COPS7A-217ENST00000543537 SNX24Q9Y343 169 aa11.8□□□□□ -0.52
COPS7A-217ENST00000543537 WNT6Q9Y6F9 365 aa11.8□□□□□ -0.52
COPS7A-217ENST00000543537 FRYLO94915 3013 aa11.8□□□□□ -0.52
COPS7A-217ENST00000543537 E2F8A0AVK6 867 aa11.79□□□□□ -0.52
COPS7A-217ENST00000543537 FGF10O15520 208 aaPredicted RBP11.79□□□□□ -0.52
COPS7A-217ENST00000543537 IVLP07476 585 aa11.79□□□□□ -0.52
COPS7A-217ENST00000543537 NUDT17P0C025 328 aa11.79□□□□□ -0.52
COPS7A-217ENST00000543537 KRT10P13645 584 aa11.79□□□□□ -0.52
COPS7A-217ENST00000543537 TGM1P22735 817 aa11.79□□□□□ -0.52
COPS7A-217ENST00000543537 GALK1P51570 392 aa11.79□□□□□ -0.52
COPS7A-217ENST00000543537 PMS2P54278 862 aa11.79□□□□□ -0.52
COPS7A-217ENST00000543537 OTUD4Q01804 1114 aaKnown RBP11.79□□□□□ -0.52
COPS7A-217ENST00000543537 DHX9Q08211 1270 aaKnown RBP11.79□□□□□ -0.52
COPS7A-217ENST00000543537 SNX1Q13596 522 aa11.79□□□□□ -0.52
COPS7A-217ENST00000543537 SMTNL2Q2TAL5 461 aa11.79□□□□□ -0.52
COPS7A-217ENST00000543537 ATP13A4Q4VNC1 1196 aa11.79□□□□□ -0.52
COPS7A-217ENST00000543537 HECTD3Q5T447 861 aa11.79□□□□□ -0.52
COPS7A-217ENST00000543537 ARMC3Q5W041 872 aa11.79□□□□□ -0.52
COPS7A-217ENST00000543537 DENND2CQ68D51 928 aa11.79□□□□□ -0.52
COPS7A-217ENST00000543537 AADACL2Q6P093 401 aa11.79□□□□□ -0.52
COPS7A-217ENST00000543537 MSANTD2Q6P1R3 559 aa11.79□□□□□ -0.52
COPS7A-217ENST00000543537 DARS2Q6PI48 645 aaKnown RBP11.79□□□□□ -0.52
COPS7A-217ENST00000543537 KLHDC10Q6PID8 442 aa11.79□□□□□ -0.52
COPS7A-217ENST00000543537 TMC3Q7Z5M5 1100 aa11.79□□□□□ -0.52
COPS7A-217ENST00000543537 WDR5BQ86VZ2 330 aa11.79□□□□□ -0.52
COPS7A-217ENST00000543537 PPIL6Q8IXY8 311 aa11.79□□□□□ -0.52
COPS7A-217ENST00000543537 CAMKK1Q8N5S9 505 aa11.79□□□□□ -0.52
COPS7A-217ENST00000543537 SCAMP5Q8TAC9 235 aa11.79□□□□□ -0.52
COPS7A-217ENST00000543537 RNF34Q969K3 372 aa11.79□□□□□ -0.52
COPS7A-217ENST00000543537 FBXO32Q969P5 355 aa11.79□□□□□ -0.52
COPS7A-217ENST00000543537 TMEM109Q9BVC6 243 aa11.79□□□□□ -0.52
COPS7A-217ENST00000543537 KLC2Q9H0B6 622 aa11.79□□□□□ -0.52
COPS7A-217ENST00000543537 DPH5Q9H2P9 285 aa11.79□□□□□ -0.52
COPS7A-217ENST00000543537 LINC00597Q9H2U6 94 aa11.79□□□□□ -0.52
COPS7A-217ENST00000543537 CATSPERBQ9H7T0 1116 aa11.79□□□□□ -0.52
COPS7A-217ENST00000543537 C2orf42Q9NWW7 574 aa11.79□□□□□ -0.52
COPS7A-217ENST00000543537 DDIT4Q9NX09 232 aa11.79□□□□□ -0.52
COPS7A-217ENST00000543537 DNPEPQ9ULA0 475 aa11.79□□□□□ -0.52
COPS7A-217ENST00000543537 NEU2Q9Y3R4 380 aa11.79□□□□□ -0.52
COPS7A-217ENST00000543537 CPQQ9Y646 472 aa11.79□□□□□ -0.52
COPS7A-217ENST00000543537 A0A0A0MRY4 1105 aa11.78□□□□□ -0.52
COPS7A-217ENST00000543537 TCRBV7S2A1N4TA0A589 114 aa11.78□□□□□ -0.52
COPS7A-217ENST00000543537 YJEFN3A6XGL0 299 aa11.78□□□□□ -0.52
COPS7A-217ENST00000543537 HMGB1P1B2RPK0 211 aaPredicted RBP11.78□□□□□ -0.52
COPS7A-217ENST00000543537 E7ENQ6 273 aa11.78□□□□□ -0.52
COPS7A-217ENST00000543537 H7C0C1 242 aa11.78□□□□□ -0.52
COPS7A-217ENST00000543537 DNALI1O14645 258 aaPredicted RBP11.78□□□□□ -0.52
COPS7A-217ENST00000543537 COCHO43405 550 aa11.78□□□□□ -0.52
COPS7A-217ENST00000543537 LRP3O75074 770 aa11.78□□□□□ -0.52
COPS7A-217ENST00000543537 SPAG6O75602 509 aa11.78□□□□□ -0.52
COPS7A-217ENST00000543537 BEST1O76090 585 aa11.78□□□□□ -0.52
COPS7A-217ENST00000543537 EGFP01133 1207 aa11.78□□□□□ -0.52
COPS7A-217ENST00000543537 MYZAPP0CAP1 466 aa11.78□□□□□ -0.52
COPS7A-217ENST00000543537 OPRD1P41143 372 aa11.78□□□□□ -0.52
COPS7A-217ENST00000543537 RPL21P46778 160 aaKnown RBP11.78□□□□□ -0.52
COPS7A-217ENST00000543537 ATP5OP48047 213 aa11.78□□□□□ -0.52
COPS7A-217ENST00000543537 FOXK2Q01167 660 aa11.78□□□□□ -0.52
COPS7A-217ENST00000543537 RING1Q06587 406 aa11.78□□□□□ -0.52
COPS7A-217ENST00000543537 IFFO1Q0D2I5 559 aa11.78□□□□□ -0.52
COPS7A-217ENST00000543537 PAFAH1B3Q15102 231 aaKnown RBP11.78□□□□□ -0.52
COPS7A-217ENST00000543537 TAF5Q15542 800 aa11.78□□□□□ -0.52
COPS7A-217ENST00000543537 PPP6R3Q5H9R7 873 aaPredicted RBP11.78□□□□□ -0.52
COPS7A-217ENST00000543537 C6orf118Q5T5N4 469 aa11.78□□□□□ -0.52
COPS7A-217ENST00000543537 LAIR1Q6GTX8 287 aa11.78□□□□□ -0.52
COPS7A-217ENST00000543537 PKN3Q6P5Z2 889 aa11.78□□□□□ -0.52
COPS7A-217ENST00000543537 CENPUQ71F23 418 aa11.78□□□□□ -0.52
COPS7A-217ENST00000543537 SYT13Q7L8C5 426 aa11.78□□□□□ -0.52
COPS7A-217ENST00000543537 ZCCHC9Q8N567 271 aaKnown RBP11.78□□□□□ -0.52
COPS7A-217ENST00000543537 EZH1Q92800 747 aaPredicted RBP11.78□□□□□ -0.52
COPS7A-217ENST00000543537 LRRC39Q96DD0 335 aa11.78□□□□□ -0.52
COPS7A-217ENST00000543537 CSPG4P5Q96PW8 444 aa11.78□□□□□ -0.52
COPS7A-217ENST00000543537 TBC1D14Q9P2M4 693 aa11.78□□□□□ -0.52
COPS7A-217ENST00000543537 TLR6Q9Y2C9 796 aa11.78□□□□□ -0.52
COPS7A-217ENST00000543537 DMXL1Q9Y485 3027 aa11.78□□□□□ -0.52
COPS7A-217ENST00000543537 ESYT3A0FGR9 886 aa11.77□□□□□ -0.53
COPS7A-217ENST00000543537 GOLGA6CA6NDK9 693 aa11.77□□□□□ -0.53
COPS7A-217ENST00000543537 C5orf60A6NFR6 353 aa11.77□□□□□ -0.53
COPS7A-217ENST00000543537 EEF2KO00418 725 aaKnown RBP11.77□□□□□ -0.53
COPS7A-217ENST00000543537 PIK3R2O00459 728 aa11.77□□□□□ -0.53
COPS7A-217ENST00000543537 PSMD3O43242 534 aa11.77□□□□□ -0.53
COPS7A-217ENST00000543537 HRO43593 1189 aa11.77□□□□□ -0.53
COPS7A-217ENST00000543537 GREM1O60565 184 aa11.77□□□□□ -0.53
COPS7A-217ENST00000543537 RNF40O75150 1001 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms