RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 PLA2G6O60733 806 aa19.67■□□□□ 0.74
SUDS3-204ENST00000543473 JAK1P23458 1154 aa19.67■□□□□ 0.74
SUDS3-204ENST00000543473 PRIM2P49643 509 aa19.67■□□□□ 0.74
SUDS3-204ENST00000543473 ZIK1Q3SY52 487 aaPredicted RBP19.67■□□□□ 0.74
SUDS3-204ENST00000543473 TTC23Q5W5X9 447 aa19.67■□□□□ 0.74
SUDS3-204ENST00000543473 LUZP2Q86TE4 346 aa19.67■□□□□ 0.74
SUDS3-204ENST00000543473 ADGRF2Q8IZF7 708 aa19.67■□□□□ 0.74
SUDS3-204ENST00000543473 TCF12Q99081 682 aa19.67■□□□□ 0.74
SUDS3-204ENST00000543473 FBXO21O94952 628 aa19.66■□□□□ 0.74
SUDS3-204ENST00000543473 TKTL1P51854 596 aa19.66■□□□□ 0.74
SUDS3-204ENST00000543473 INAQ16352 499 aa19.66■□□□□ 0.74
SUDS3-204ENST00000543473 SPANXN2Q5MJ10 180 aa19.66■□□□□ 0.74
SUDS3-204ENST00000543473 C12orf56Q8IXR9 622 aa19.66■□□□□ 0.74
SUDS3-204ENST00000543473 DEFB106AQ8N104 65 aa19.66■□□□□ 0.74
SUDS3-204ENST00000543473 FBXO39Q8N4B4 442 aa19.66■□□□□ 0.74
SUDS3-204ENST00000543473 SH3KBP1Q96B97 665 aa19.66■□□□□ 0.74
SUDS3-204ENST00000543473 SYNCRIPO60506 623 aaKnown RBP19.66■□□□□ 0.74
SUDS3-204ENST00000543473 SNAP91O60641 907 aa19.66■□□□□ 0.74
SUDS3-204ENST00000543473 TBX10O75333 385 aa19.66■□□□□ 0.74
SUDS3-204ENST00000543473 ATG7O95352 703 aa19.66■□□□□ 0.74
SUDS3-204ENST00000543473 VTNP04004 478 aa19.66■□□□□ 0.74
SUDS3-204ENST00000543473 PEX2P28328 305 aa19.66■□□□□ 0.74
SUDS3-204ENST00000543473 HADHBP55084 474 aaKnown RBP19.66■□□□□ 0.74
SUDS3-204ENST00000543473 MTTPP55157 894 aa19.66■□□□□ 0.74
SUDS3-204ENST00000543473 TRAF3Q13114 568 aa19.66■□□□□ 0.74
SUDS3-204ENST00000543473 PKN3Q6P5Z2 889 aa19.66■□□□□ 0.74
SUDS3-204ENST00000543473 NANOGNBQ7Z5D8 188 aa19.66■□□□□ 0.74
SUDS3-204ENST00000543473 CPT1BQ92523 772 aa19.66■□□□□ 0.74
SUDS3-204ENST00000543473 NKD2Q969F2 451 aaPredicted RBP19.66■□□□□ 0.74
SUDS3-204ENST00000543473 FAM84AQ96KN4 292 aa19.66■□□□□ 0.74
SUDS3-204ENST00000543473 SNRNP25Q9BV90 132 aaKnown RBP19.66■□□□□ 0.74
SUDS3-204ENST00000543473 PRDM5Q9NQX1 630 aaPredicted RBP19.66■□□□□ 0.74
SUDS3-204ENST00000543473 CDV3Q9UKY7 258 aaKnown RBP19.66■□□□□ 0.74
SUDS3-204ENST00000543473 PNMA8CA0A1B0GUJ8 204 aa19.66■□□□□ 0.74
SUDS3-204ENST00000543473 CSE1LP55060 971 aaKnown RBP19.66■□□□□ 0.74
SUDS3-204ENST00000543473 MAP3K7CLP57077 242 aa19.66■□□□□ 0.74
SUDS3-204ENST00000543473 KHDRBS1Q07666 443 aaKnown RBP eCLIP19.66■□□□□ 0.74
SUDS3-204ENST00000543473 SQLEQ14534 574 aa19.66■□□□□ 0.74
SUDS3-204ENST00000543473 ANO7Q6IWH7 933 aa19.66■□□□□ 0.74
SUDS3-204ENST00000543473 CCDC80Q76M96 950 aa19.66■□□□□ 0.74
SUDS3-204ENST00000543473 CDH19Q9H159 772 aa19.66■□□□□ 0.74
SUDS3-204ENST00000543473 NT5MQ9NPB1 228 aa19.66■□□□□ 0.74
SUDS3-204ENST00000543473 LMCD1Q9NZU5 365 aa19.66■□□□□ 0.74
SUDS3-204ENST00000543473 DLG5Q8TDM6 1919 aa19.66■□□□□ 0.74
SUDS3-204ENST00000543473 ZC3H4Q9UPT8 1303 aaKnown RBP19.66■□□□□ 0.74
SUDS3-204ENST00000543473 A0A087WZ62 844 aa19.65■□□□□ 0.74
SUDS3-204ENST00000543473 FAM155BO75949 473 aa19.65■□□□□ 0.74
SUDS3-204ENST00000543473 DNAJB2P25686 324 aa19.65■□□□□ 0.74
SUDS3-204ENST00000543473 POU1F1P28069 291 aa19.65■□□□□ 0.74
SUDS3-204ENST00000543473 NEK3P51956 506 aa19.65■□□□□ 0.74
SUDS3-204ENST00000543473 RAB14P61106 215 aa19.65■□□□□ 0.74
SUDS3-204ENST00000543473 PACS1Q6VY07 963 aa19.65■□□□□ 0.74
SUDS3-204ENST00000543473 RPRD1AQ96P16 312 aaPredicted RBP19.65■□□□□ 0.74
SUDS3-204ENST00000543473 FDXACB1Q9BRP7 624 aaPredicted RBP19.65■□□□□ 0.74
SUDS3-204ENST00000543473 ATXN3LQ9H3M9 355 aa19.65■□□□□ 0.74
SUDS3-204ENST00000543473 ASB7Q9H672 318 aa19.65■□□□□ 0.74
SUDS3-204ENST00000543473 TBC1D13Q9NVG8 400 aa19.65■□□□□ 0.74
SUDS3-204ENST00000543473 NKX1-2Q9UD57 310 aaPredicted RBP19.65■□□□□ 0.74
SUDS3-204ENST00000543473 C17orf102A2RUQ5 167 aa19.65■□□□□ 0.74
SUDS3-204ENST00000543473 H3BRB1 525 aa19.65■□□□□ 0.74
SUDS3-204ENST00000543473 DDX5P17844 614 aaKnown RBP19.65■□□□□ 0.74
SUDS3-204ENST00000543473 SLC26A2P50443 739 aa19.65■□□□□ 0.74
SUDS3-204ENST00000543473 GJC2Q5T442 439 aaPredicted RBP19.65■□□□□ 0.74
SUDS3-204ENST00000543473 TTC30AQ86WT1 665 aa19.65■□□□□ 0.74
SUDS3-204ENST00000543473 PSTKQ8IV42 348 aaKnown RBP19.65■□□□□ 0.74
SUDS3-204ENST00000543473 C10orf82Q8WW14 230 aa19.65■□□□□ 0.74
SUDS3-204ENST00000543473 BTBD9Q96Q07 612 aa19.65■□□□□ 0.74
SUDS3-204ENST00000543473 APOL4Q9BPW4 351 aa19.65■□□□□ 0.74
SUDS3-204ENST00000543473 TUT1Q9H6E5 874 aaKnown RBP19.65■□□□□ 0.74
SUDS3-204ENST00000543473 NPM3O75607 178 aaKnown RBP19.65■□□□□ 0.74
SUDS3-204ENST00000543473 CRHR1P34998 444 aa19.65■□□□□ 0.74
SUDS3-204ENST00000543473 CYP1B1Q16678 543 aa19.65■□□□□ 0.74
SUDS3-204ENST00000543473 DDR2Q16832 855 aa19.65■□□□□ 0.74
SUDS3-204ENST00000543473 CNPY1Q3B7I2 92 aa19.65■□□□□ 0.74
SUDS3-204ENST00000543473 USP50Q70EL3 339 aaPredicted RBP19.65■□□□□ 0.74
SUDS3-204ENST00000543473 ILDR2Q71H61 639 aa19.65■□□□□ 0.74
SUDS3-204ENST00000543473 PIWIL4Q7Z3Z4 852 aaKnown RBP19.65■□□□□ 0.74
SUDS3-204ENST00000543473 SYTL1Q8IYJ3 562 aa19.65■□□□□ 0.74
SUDS3-204ENST00000543473 TRIM63Q969Q1 353 aa19.65■□□□□ 0.74
SUDS3-204ENST00000543473 L3MBTL3Q96JM7 780 aaPredicted RBP19.65■□□□□ 0.74
SUDS3-204ENST00000543473 IL22Q9GZX6 179 aa19.65■□□□□ 0.74
SUDS3-204ENST00000543473 SNX15Q9NRS6 342 aa19.65■□□□□ 0.74
SUDS3-204ENST00000543473 RGS18Q9NS28 235 aa19.65■□□□□ 0.74
SUDS3-204ENST00000543473 SIN3BO75182 1162 aa19.65■□□□□ 0.74
SUDS3-204ENST00000543473 ADSSP30520 456 aa19.65■□□□□ 0.74
SUDS3-204ENST00000543473 PPP3CCP48454 512 aa19.65■□□□□ 0.74
SUDS3-204ENST00000543473 ADIGQ0VDE8 80 aa19.65■□□□□ 0.74
SUDS3-204ENST00000543473 FAM9CQ8IZT9 166 aa19.65■□□□□ 0.74
SUDS3-204ENST00000543473 MYO1HQ8N1T3 1032 aa19.65■□□□□ 0.74
SUDS3-204ENST00000543473 EBF3Q9H4W6 596 aa19.65■□□□□ 0.74
SUDS3-204ENST00000543473 DHX33Q9H6R0 707 aaKnown RBP19.65■□□□□ 0.74
SUDS3-204ENST00000543473 MTF2Q9Y483 593 aaPredicted RBP19.65■□□□□ 0.74
SUDS3-204ENST00000543473 IRF6O14896 467 aa19.64■□□□□ 0.74
SUDS3-204ENST00000543473 SLC2A4P14672 509 aa19.64■□□□□ 0.74
SUDS3-204ENST00000543473 HK2P52789 917 aa19.64■□□□□ 0.74
SUDS3-204ENST00000543473 CDC16Q13042 620 aa19.64■□□□□ 0.74
SUDS3-204ENST00000543473 DDX39BQ13838 428 aaKnown RBP19.64■□□□□ 0.74
SUDS3-204ENST00000543473 TRPM4Q8TD43 1214 aa19.64■□□□□ 0.74
SUDS3-204ENST00000543473 LRRN4Q8WUT4 740 aa19.64■□□□□ 0.74
SUDS3-204ENST00000543473 CAPSLQ8WWF8 208 aa19.64■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms