RNA–Protein interactions for RNA: ENST00000543046.1

MDM2-229, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-229ENST00000543046 IQUBQ8NA54 791 aa4.42□□□□□ -1.7
MDM2-229ENST00000543046 SLC44A5Q8NCS7 719 aa4.42□□□□□ -1.7
MDM2-229ENST00000543046 ZNF548Q8NEK5 533 aaPredicted RBP4.42□□□□□ -1.7
MDM2-229ENST00000543046 TRAPPC12Q8WVT3 735 aa4.42□□□□□ -1.7
MDM2-229ENST00000543046 RUBCNQ92622 972 aa4.42□□□□□ -1.7
MDM2-229ENST00000543046 ITFG2Q969R8 447 aa4.42□□□□□ -1.7
MDM2-229ENST00000543046 HMCESQ96FZ2 354 aa4.42□□□□□ -1.7
MDM2-229ENST00000543046 NPAS1Q99742 590 aa4.42□□□□□ -1.7
MDM2-229ENST00000543046 PAGR1Q9BTK6 254 aa4.42□□□□□ -1.7
MDM2-229ENST00000543046 FOXP1Q9H334 677 aaPredicted RBP4.42□□□□□ -1.7
MDM2-229ENST00000543046 ABHD16BQ9H3Z7 469 aa4.42□□□□□ -1.7
MDM2-229ENST00000543046 TAF1DQ9H5J8 278 aaPredicted RBP4.42□□□□□ -1.7
MDM2-229ENST00000543046 CXorf56Q9H5V9 222 aa4.42□□□□□ -1.7
MDM2-229ENST00000543046 PDE11AQ9HCR9 933 aa4.42□□□□□ -1.7
MDM2-229ENST00000543046 KCND3Q9UK17 655 aa4.42□□□□□ -1.7
MDM2-229ENST00000543046 UTS2RQ9UKP6 389 aa4.42□□□□□ -1.7
MDM2-229ENST00000543046 BAG5Q9UL15 447 aa4.42□□□□□ -1.7
MDM2-229ENST00000543046 JRKLQ9Y4A0 524 aa4.42□□□□□ -1.7
MDM2-229ENST00000543046 HS3ST3B1Q9Y662 390 aa4.42□□□□□ -1.7
MDM2-229ENST00000543046 DDX49Q9Y6V7 483 aaKnown RBP4.42□□□□□ -1.7
MDM2-229ENST00000543046 LRRC9Q6ZRR7 1453 aa4.42□□□□□ -1.7
MDM2-229ENST00000543046 PRXQ9BXM0 1461 aa4.42□□□□□ -1.7
MDM2-229ENST00000543046 KANK1Q14678 1352 aa4.41□□□□□ -1.7
MDM2-229ENST00000543046 ANKRD30AQ9BXX3 1397 aa4.41□□□□□ -1.7
MDM2-229ENST00000543046 TIAM1Q13009 1591 aa4.41□□□□□ -1.7
MDM2-229ENST00000543046 BLMP54132 1417 aaPredicted RBP4.41□□□□□ -1.7
MDM2-229ENST00000543046 FAM90A20PA6NIJ5 464 aa4.41□□□□□ -1.7
MDM2-229ENST00000543046 SMTNL1A8MU46 457 aa4.41□□□□□ -1.7
MDM2-229ENST00000543046 PRPF4O43172 522 aaKnown RBP eCLIP4.41□□□□□ -1.7
MDM2-229ENST00000543046 BAG4O95429 457 aaKnown RBP4.41□□□□□ -1.7
MDM2-229ENST00000543046 NFATC1O95644 943 aa4.41□□□□□ -1.7
MDM2-229ENST00000543046 GRK6P43250 576 aa4.41□□□□□ -1.7
MDM2-229ENST00000543046 ME1P48163 572 aa4.41□□□□□ -1.7
MDM2-229ENST00000543046 TDO2P48775 406 aa4.41□□□□□ -1.7
MDM2-229ENST00000543046 PRKG1Q13976 671 aa4.41□□□□□ -1.7
MDM2-229ENST00000543046 DCTN1Q14203 1278 aa4.41□□□□□ -1.7
MDM2-229ENST00000543046 POSTNQ15063 836 aa4.41□□□□□ -1.7
MDM2-229ENST00000543046 DLGAP5Q15398 846 aa4.41□□□□□ -1.7
MDM2-229ENST00000543046 GRAMD1BQ3KR37 738 aa4.41□□□□□ -1.7
MDM2-229ENST00000543046 TEX35Q5T0J7 233 aa4.41□□□□□ -1.7
MDM2-229ENST00000543046 C10orf76Q5T2E6 689 aa4.41□□□□□ -1.7
MDM2-229ENST00000543046 C20orf194Q5TEA3 1177 aa4.41□□□□□ -1.7
MDM2-229ENST00000543046 ISM2Q6H9L7 571 aa4.41□□□□□ -1.7
MDM2-229ENST00000543046 ERAP2Q6P179 960 aa4.41□□□□□ -1.7
MDM2-229ENST00000543046 CYB5R4Q7L1T6 521 aa4.41□□□□□ -1.7
MDM2-229ENST00000543046 DDIASQ8IXT1 998 aa4.41□□□□□ -1.7
MDM2-229ENST00000543046 GALNT15Q8N3T1 639 aa4.41□□□□□ -1.7
MDM2-229ENST00000543046 ENDOVQ8N8Q3 282 aaKnown RBP4.41□□□□□ -1.7
MDM2-229ENST00000543046 ZNF397Q8NF99 534 aaPredicted RBP4.41□□□□□ -1.7
MDM2-229ENST00000543046 OR6Y1Q8NGX8 325 aa4.41□□□□□ -1.7
MDM2-229ENST00000543046 MPLKIPQ8TAP9 179 aa4.41□□□□□ -1.7
MDM2-229ENST00000543046 KIAA1524Q8TCG1 905 aa4.41□□□□□ -1.7
MDM2-229ENST00000543046 TBC1D22AQ8WUA7 517 aa4.41□□□□□ -1.7
MDM2-229ENST00000543046 IP6K1Q92551 441 aa4.41□□□□□ -1.7
MDM2-229ENST00000543046 KAT2AQ92830 837 aa4.41□□□□□ -1.7
MDM2-229ENST00000543046 CLMNQ96JQ2 1002 aa4.41□□□□□ -1.7
MDM2-229ENST00000543046 PIGSQ96S52 555 aa4.41□□□□□ -1.7
MDM2-229ENST00000543046 KRTAP9-8Q9BYQ0 159 aa4.41□□□□□ -1.7
MDM2-229ENST00000543046 MAF1Q9H063 256 aa4.41□□□□□ -1.7
MDM2-229ENST00000543046 SAYSD1Q9NPB0 183 aa4.41□□□□□ -1.7
MDM2-229ENST00000543046 THSD1Q9NS62 852 aa4.41□□□□□ -1.7
MDM2-229ENST00000543046 PSD3Q9NYI0 1048 aa4.41□□□□□ -1.7
MDM2-229ENST00000543046 MSRB1Q9NZV6 116 aa4.41□□□□□ -1.7
MDM2-229ENST00000543046 SUFUQ9UMX1 484 aa4.41□□□□□ -1.7
MDM2-229ENST00000543046 LAMP3Q9UQV4 416 aa4.41□□□□□ -1.7
MDM2-229ENST00000543046 RCE1Q9Y256 329 aa4.41□□□□□ -1.7
MDM2-229ENST00000543046 TNFSF13BQ9Y275 285 aa4.41□□□□□ -1.7
MDM2-229ENST00000543046 POLA1P09884 1462 aaPredicted RBP4.41□□□□□ -1.7
MDM2-229ENST00000543046 MTUS2Q5JR59 1369 aa4.4□□□□□ -1.7
MDM2-229ENST00000543046 PLEKHH1Q9ULM0 1364 aa4.4□□□□□ -1.7
MDM2-229ENST00000543046 RTEL1-TNFRSF6BF6WH68 1400 aa4.4□□□□□ -1.7
MDM2-229ENST00000543046 A0A0G2JK05 382 aa4.4□□□□□ -1.71
MDM2-229ENST00000543046 A0A1W2PPC1 479 aa4.4□□□□□ -1.71
MDM2-229ENST00000543046 CXorf65A6NEN9 183 aa4.4□□□□□ -1.71
MDM2-229ENST00000543046 HMGB1P1B2RPK0 211 aaPredicted RBP4.4□□□□□ -1.71
MDM2-229ENST00000543046 ZNF814B7Z6K7 855 aa4.4□□□□□ -1.71
MDM2-229ENST00000543046 RHODO00212 210 aa4.4□□□□□ -1.71
MDM2-229ENST00000543046 GRM8O00222 908 aa4.4□□□□□ -1.71
MDM2-229ENST00000543046 HNRNPRO43390 633 aaKnown RBP4.4□□□□□ -1.71
MDM2-229ENST00000543046 NBNO60934 754 aa4.4□□□□□ -1.71
MDM2-229ENST00000543046 IGHDP01880 384 aa4.4□□□□□ -1.71
MDM2-229ENST00000543046 IGKV2-30P06310 120 aa4.4□□□□□ -1.71
MDM2-229ENST00000543046 CIITAP33076 1130 aa4.4□□□□□ -1.71
MDM2-229ENST00000543046 MAGEA9P43362 315 aa4.4□□□□□ -1.71
MDM2-229ENST00000543046 CDK18Q07002 472 aa4.4□□□□□ -1.71
MDM2-229ENST00000543046 NCBP1Q09161 790 aaKnown RBP4.4□□□□□ -1.71
MDM2-229ENST00000543046 GPS2Q13227 327 aa4.4□□□□□ -1.71
MDM2-229ENST00000543046 PDCLQ13371 301 aa4.4□□□□□ -1.71
MDM2-229ENST00000543046 GALNT3Q14435 633 aa4.4□□□□□ -1.71
MDM2-229ENST00000543046 GPR162Q16538 588 aa4.4□□□□□ -1.71
MDM2-229ENST00000543046 SMTNL2Q2TAL5 461 aa4.4□□□□□ -1.71
MDM2-229ENST00000543046 TMEM95Q3KNT9 176 aa4.4□□□□□ -1.71
MDM2-229ENST00000543046 ARL13AQ5H913 290 aaPredicted RBP4.4□□□□□ -1.71
MDM2-229ENST00000543046 SYNE3Q6ZMZ3 975 aa4.4□□□□□ -1.71
MDM2-229ENST00000543046 SYT13Q7L8C5 426 aa4.4□□□□□ -1.71
MDM2-229ENST00000543046 IRF2BP2Q7Z5L9 587 aa4.4□□□□□ -1.71
MDM2-229ENST00000543046 CSGALNACT1Q8TDX6 532 aa4.4□□□□□ -1.71
MDM2-229ENST00000543046 CCT6BQ92526 530 aa4.4□□□□□ -1.71
MDM2-229ENST00000543046 GOLGA1Q92805 767 aa4.4□□□□□ -1.71
MDM2-229ENST00000543046 EME1Q96AY2 570 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms