RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 LZTR1Q8N653 840 aa10.92□□□□□ -0.66
NPIPB3-210ENST00000542817 DCAF4L2Q8NA75 395 aa10.92□□□□□ -0.66
NPIPB3-210ENST00000542817 NSMCE3Q96MG7 304 aa10.92□□□□□ -0.66
NPIPB3-210ENST00000542817 ACOX2Q99424 681 aa10.92□□□□□ -0.66
NPIPB3-210ENST00000542817 FAM118BQ9BPY3 351 aa10.92□□□□□ -0.66
NPIPB3-210ENST00000542817 FOXQ1Q9C009 403 aa10.92□□□□□ -0.66
NPIPB3-210ENST00000542817 PRDM16Q9HAZ2 1276 aa10.92□□□□□ -0.66
NPIPB3-210ENST00000542817 CD248Q9HCU0 757 aa10.92□□□□□ -0.66
NPIPB3-210ENST00000542817 LTB4R2Q9NPC1 389 aa10.92□□□□□ -0.66
NPIPB3-210ENST00000542817 ZDHHC4Q9NPG8 344 aa10.92□□□□□ -0.66
NPIPB3-210ENST00000542817 RBM12Q9NTZ6 932 aaKnown RBP10.92□□□□□ -0.66
NPIPB3-210ENST00000542817 ELOVL2Q9NXB9 296 aa10.92□□□□□ -0.66
NPIPB3-210ENST00000542817 CTAGE9A4FU28 777 aa10.91□□□□□ -0.66
NPIPB3-210ENST00000542817 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.91□□□□□ -0.66
NPIPB3-210ENST00000542817 APOC4-APOC2K7ER74 178 aa10.91□□□□□ -0.66
NPIPB3-210ENST00000542817 K7ERQ8 282 aa10.91□□□□□ -0.66
NPIPB3-210ENST00000542817 CES2O00748 559 aa10.91□□□□□ -0.66
NPIPB3-210ENST00000542817 APOL1O14791 398 aa10.91□□□□□ -0.66
NPIPB3-210ENST00000542817 SMAD6O43541 496 aaKnown RBP10.91□□□□□ -0.66
NPIPB3-210ENST00000542817 KDELR3O43731 214 aa10.91□□□□□ -0.66
NPIPB3-210ENST00000542817 CEP104O60308 925 aa10.91□□□□□ -0.66
NPIPB3-210ENST00000542817 PRAMEF11O60813 436 aa10.91□□□□□ -0.66
NPIPB3-210ENST00000542817 APOC2P02655 101 aa10.91□□□□□ -0.66
NPIPB3-210ENST00000542817 FGGP02679 453 aa10.91□□□□□ -0.66
NPIPB3-210ENST00000542817 VAV1P15498 845 aa10.91□□□□□ -0.66
NPIPB3-210ENST00000542817 TGM2P21980 687 aa10.91□□□□□ -0.66
NPIPB3-210ENST00000542817 GARSP41250 739 aaKnown RBP10.91□□□□□ -0.66
NPIPB3-210ENST00000542817 TNFRSF4P43489 277 aa10.91□□□□□ -0.66
NPIPB3-210ENST00000542817 STK19P49842 368 aaPredicted RBP10.91□□□□□ -0.66
NPIPB3-210ENST00000542817 VASPP50552 380 aaPredicted RBP10.91□□□□□ -0.66
NPIPB3-210ENST00000542817 SIGLEC14Q08ET2 396 aa10.91□□□□□ -0.66
NPIPB3-210ENST00000542817 TFDP2Q14188 446 aa10.91□□□□□ -0.66
NPIPB3-210ENST00000542817 IHHQ14623 411 aa10.91□□□□□ -0.66
NPIPB3-210ENST00000542817 NOMO1Q15155 1222 aa10.91□□□□□ -0.66
NPIPB3-210ENST00000542817 EGFLAMQ63HQ2 1017 aa10.91□□□□□ -0.66
NPIPB3-210ENST00000542817 CWF19L1Q69YN2 538 aaKnown RBP10.91□□□□□ -0.66
NPIPB3-210ENST00000542817 TRIM67Q6ZTA4 783 aa10.91□□□□□ -0.66
NPIPB3-210ENST00000542817 SUGP1Q8IWZ8 645 aaKnown RBP10.91□□□□□ -0.66
NPIPB3-210ENST00000542817 SLC35B2Q8TB61 432 aa10.91□□□□□ -0.66
NPIPB3-210ENST00000542817 ACTL9Q8TC94 416 aa10.91□□□□□ -0.66
NPIPB3-210ENST00000542817 ACTRT1Q8TDG2 376 aa10.91□□□□□ -0.66
NPIPB3-210ENST00000542817 FRS2Q8WU20 508 aa10.91□□□□□ -0.66
NPIPB3-210ENST00000542817 CYB5D2Q8WUJ1 264 aa10.91□□□□□ -0.66
NPIPB3-210ENST00000542817 MAML1Q92585 1016 aa10.91□□□□□ -0.66
NPIPB3-210ENST00000542817 HAUS1Q96CS2 278 aa10.91□□□□□ -0.66
NPIPB3-210ENST00000542817 PBKQ96KB5 322 aa10.91□□□□□ -0.66
NPIPB3-210ENST00000542817 TSGA13Q96PP4 275 aa10.91□□□□□ -0.66
NPIPB3-210ENST00000542817 LGMNQ99538 433 aa10.91□□□□□ -0.66
NPIPB3-210ENST00000542817 C10orf88Q9H8K7 445 aa10.91□□□□□ -0.66
NPIPB3-210ENST00000542817 POLR3BQ9NW08 1133 aaPredicted RBP10.91□□□□□ -0.66
NPIPB3-210ENST00000542817 C2orf42Q9NWW7 574 aa10.91□□□□□ -0.66
NPIPB3-210ENST00000542817 DLGAP2Q9P1A6 1054 aa10.91□□□□□ -0.66
NPIPB3-210ENST00000542817 SLCO3A1Q9UIG8 710 aa10.91□□□□□ -0.66
NPIPB3-210ENST00000542817 HEY1Q9Y5J3 304 aa10.91□□□□□ -0.66
NPIPB3-210ENST00000542817 ATG2BQ96BY7 2078 aa10.9□□□□□ -0.66
NPIPB3-210ENST00000542817 KANSL1LA0AUZ9 987 aa10.9□□□□□ -0.66
NPIPB3-210ENST00000542817 TBC1D3BA6NDS4 549 aa10.9□□□□□ -0.66
NPIPB3-210ENST00000542817 WASH3PC4AMC7 463 aa10.9□□□□□ -0.66
NPIPB3-210ENST00000542817 MAN2B1O00754 1011 aa10.9□□□□□ -0.66
NPIPB3-210ENST00000542817 PI15O43692 258 aa10.9□□□□□ -0.66
NPIPB3-210ENST00000542817 ADAM23O75077 832 aa10.9□□□□□ -0.66
NPIPB3-210ENST00000542817 TJP3O95049 919 aa10.9□□□□□ -0.66
NPIPB3-210ENST00000542817 HNRNPLP14866 589 aaKnown RBP eCLIP10.9□□□□□ -0.66
NPIPB3-210ENST00000542817 ZFXP17010 805 aaPredicted RBP10.9□□□□□ -0.66
NPIPB3-210ENST00000542817 DRD1P21728 446 aa10.9□□□□□ -0.66
NPIPB3-210ENST00000542817 NRLP54845 237 aa10.9□□□□□ -0.66
NPIPB3-210ENST00000542817 OXCT1P55809 520 aa10.9□□□□□ -0.66
NPIPB3-210ENST00000542817 FAM193AP78312 1265 aa10.9□□□□□ -0.66
NPIPB3-210ENST00000542817 ECT2LQ008S8 904 aa10.9□□□□□ -0.66
NPIPB3-210ENST00000542817 OTUD4Q01804 1114 aaKnown RBP10.9□□□□□ -0.66
NPIPB3-210ENST00000542817 PPIDQ08752 370 aaKnown RBP10.9□□□□□ -0.66
NPIPB3-210ENST00000542817 DMC1Q14565 340 aa10.9□□□□□ -0.66
NPIPB3-210ENST00000542817 PRKD1Q15139 912 aaPredicted RBP10.9□□□□□ -0.66
NPIPB3-210ENST00000542817 OASLQ15646 514 aaKnown RBP10.9□□□□□ -0.66
NPIPB3-210ENST00000542817 DGKKQ5KSL6 1271 aa10.9□□□□□ -0.66
NPIPB3-210ENST00000542817 LINGO4Q6UY18 593 aa10.9□□□□□ -0.66
NPIPB3-210ENST00000542817 ZNF852Q6ZMS4 543 aa10.9□□□□□ -0.66
NPIPB3-210ENST00000542817 LEKR1Q6ZMV7 388 aa10.9□□□□□ -0.66
NPIPB3-210ENST00000542817 Q6ZS52 159 aa10.9□□□□□ -0.66
NPIPB3-210ENST00000542817 ADAT2Q7Z6V5 191 aaKnown RBP10.9□□□□□ -0.66
NPIPB3-210ENST00000542817 CCDC105Q8IYK2 499 aa10.9□□□□□ -0.66
NPIPB3-210ENST00000542817 PRELID2Q8N945 189 aa10.9□□□□□ -0.66
NPIPB3-210ENST00000542817 ZNF557Q8N988 423 aaPredicted RBP10.9□□□□□ -0.66
NPIPB3-210ENST00000542817 WFIKKN2Q8TEU8 576 aa10.9□□□□□ -0.66
NPIPB3-210ENST00000542817 USP33Q8TEY7 942 aa10.9□□□□□ -0.66
NPIPB3-210ENST00000542817 ATG4AQ8WYN0 398 aa10.9□□□□□ -0.66
NPIPB3-210ENST00000542817 CLDN23Q96B33 292 aa10.9□□□□□ -0.66
NPIPB3-210ENST00000542817 HDAC11Q96DB2 347 aa10.9□□□□□ -0.66
NPIPB3-210ENST00000542817 RPL10LQ96L21 214 aaKnown RBP10.9□□□□□ -0.66
NPIPB3-210ENST00000542817 SPON2Q9BUD6 331 aa10.9□□□□□ -0.66
NPIPB3-210ENST00000542817 COL25A1Q9BXS0 654 aaPredicted RBP10.9□□□□□ -0.66
NPIPB3-210ENST00000542817 MAK16Q9BXY0 300 aaKnown RBP10.9□□□□□ -0.66
NPIPB3-210ENST00000542817 MUC3BQ9H195 1237 aa10.9□□□□□ -0.66
NPIPB3-210ENST00000542817 TMEM245Q9H330 911 aa10.9□□□□□ -0.66
NPIPB3-210ENST00000542817 TBC1D17Q9HA65 648 aa10.9□□□□□ -0.66
NPIPB3-210ENST00000542817 USP29Q9HBJ7 922 aa10.9□□□□□ -0.66
NPIPB3-210ENST00000542817 ATP13A1Q9HD20 1204 aa10.9□□□□□ -0.66
NPIPB3-210ENST00000542817 THAP10Q9P2Z0 257 aaPredicted RBP10.9□□□□□ -0.66
NPIPB3-210ENST00000542817 IPO11Q9UI26 975 aaKnown RBP10.9□□□□□ -0.66
NPIPB3-210ENST00000542817 VPS28Q9UK41 221 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms