RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 TTC17Q96AE7 1141 aa23.62■■□□□ 1.37
HOMER3-205ENST00000542541 OLFM3Q96PB7 478 aa23.62■■□□□ 1.37
HOMER3-205ENST00000542541 IPO11Q9UI26 975 aaKnown RBP23.62■■□□□ 1.37
HOMER3-205ENST00000542541 MRPS17Q9Y2R5 130 aaKnown RBP23.62■■□□□ 1.37
HOMER3-205ENST00000542541 MCF2LO15068 1137 aa23.62■■□□□ 1.37
HOMER3-205ENST00000542541 MAP3K6O95382 1288 aa23.62■■□□□ 1.37
HOMER3-205ENST00000542541 ASLP04424 464 aa23.62■■□□□ 1.37
HOMER3-205ENST00000542541 TNFRSF4P43489 277 aa23.62■■□□□ 1.37
HOMER3-205ENST00000542541 GEMIN4P57678 1058 aaKnown RBP23.62■■□□□ 1.37
HOMER3-205ENST00000542541 ZNF33AQ06730 810 aa23.62■■□□□ 1.37
HOMER3-205ENST00000542541 PON2Q15165 354 aa23.62■■□□□ 1.37
HOMER3-205ENST00000542541 IER5LQ5T953 404 aa23.62■■□□□ 1.37
HOMER3-205ENST00000542541 TP53INP2Q8IXH6 220 aa23.62■■□□□ 1.37
HOMER3-205ENST00000542541 NETO2Q8NC67 525 aa23.62■■□□□ 1.37
HOMER3-205ENST00000542541 CCDC26Q8TAB7 109 aa23.62■■□□□ 1.37
HOMER3-205ENST00000542541 HDAC11Q96DB2 347 aa23.62■■□□□ 1.37
HOMER3-205ENST00000542541 TSGA13Q96PP4 275 aa23.62■■□□□ 1.37
HOMER3-205ENST00000542541 CIPCQ9C0C6 399 aa23.62■■□□□ 1.37
HOMER3-205ENST00000542541 SP110Q9HB58 689 aa23.62■■□□□ 1.37
HOMER3-205ENST00000542541 ELOVL2Q9NXB9 296 aa23.62■■□□□ 1.37
HOMER3-205ENST00000542541 CDC23Q9UJX2 597 aa23.62■■□□□ 1.37
HOMER3-205ENST00000542541 GOLGA6L10A0A0M3HER8 536 aa23.61■■□□□ 1.37
HOMER3-205ENST00000542541 HACD1B0YJ81 288 aa23.61■■□□□ 1.37
HOMER3-205ENST00000542541 ZNF189O75820 626 aaPredicted RBP23.61■■□□□ 1.37
HOMER3-205ENST00000542541 CCNCP24863 283 aa23.61■■□□□ 1.37
HOMER3-205ENST00000542541 EIF3EP60228 445 aaKnown RBP23.61■■□□□ 1.37
HOMER3-205ENST00000542541 IL10RBQ08334 325 aa23.61■■□□□ 1.37
HOMER3-205ENST00000542541 SLC20A2Q08357 652 aa23.61■■□□□ 1.37
HOMER3-205ENST00000542541 TIGD7Q6NT04 549 aaPredicted RBP23.61■■□□□ 1.37
HOMER3-205ENST00000542541 FERMT1Q9BQL6 677 aa23.61■■□□□ 1.37
HOMER3-205ENST00000542541 FBRSL1Q9HCM7 1045 aaKnown RBP23.61■■□□□ 1.37
HOMER3-205ENST00000542541 VPS51Q9UID3 782 aa23.61■■□□□ 1.37
HOMER3-205ENST00000542541 PLA2G4CQ9UP65 541 aa23.61■■□□□ 1.37
HOMER3-205ENST00000542541 PRRT4C9JH25 899 aa23.6■■□□□ 1.37
HOMER3-205ENST00000542541 KRIT1O00522 736 aa23.6■■□□□ 1.37
HOMER3-205ENST00000542541 ZXDAP98168 799 aa23.6■■□□□ 1.37
HOMER3-205ENST00000542541 ECT2LQ008S8 904 aa23.6■■□□□ 1.37
HOMER3-205ENST00000542541 MESP2Q0VG99 397 aa23.6■■□□□ 1.37
HOMER3-205ENST00000542541 CCNG2Q16589 344 aa23.6■■□□□ 1.37
HOMER3-205ENST00000542541 TMEM215Q68D42 235 aa23.6■■□□□ 1.37
HOMER3-205ENST00000542541 ZC3H18Q86VM9 953 aaKnown RBP23.6■■□□□ 1.37
HOMER3-205ENST00000542541 CCDC33Q8N5R6 958 aa23.6■■□□□ 1.37
HOMER3-205ENST00000542541 NSMCE1Q8WV22 266 aa23.6■■□□□ 1.37
HOMER3-205ENST00000542541 TFB1MQ8WVM0 346 aaKnown RBP23.6■■□□□ 1.37
HOMER3-205ENST00000542541 NELL2Q99435 816 aa23.6■■□□□ 1.37
HOMER3-205ENST00000542541 SLC25A13Q9UJS0 675 aa23.6■■□□□ 1.37
HOMER3-205ENST00000542541 H7C0C1 242 aa23.59■■□□□ 1.37
HOMER3-205ENST00000542541 MAFKO60675 156 aa23.59■■□□□ 1.37
HOMER3-205ENST00000542541 PRAMEF11O60813 436 aa23.59■■□□□ 1.37
HOMER3-205ENST00000542541 ZMPSTE24O75844 475 aa23.59■■□□□ 1.37
HOMER3-205ENST00000542541 DLDP09622 509 aaKnown RBP23.59■■□□□ 1.37
HOMER3-205ENST00000542541 ATP5OP48047 213 aa23.59■■□□□ 1.37
HOMER3-205ENST00000542541 STARD6P59095 220 aa23.59■■□□□ 1.37
HOMER3-205ENST00000542541 PPIDQ08752 370 aaKnown RBP23.59■■□□□ 1.37
HOMER3-205ENST00000542541 SIX5Q8N196 739 aa23.59■■□□□ 1.37
HOMER3-205ENST00000542541 R3HDM2Q9Y2K5 976 aaKnown RBP23.59■■□□□ 1.37
HOMER3-205ENST00000542541 STARD13Q9Y3M8 1113 aa23.59■■□□□ 1.37
HOMER3-205ENST00000542541 NCOR1O75376 2440 aa23.59■■□□□ 1.37
HOMER3-205ENST00000542541 COL4A2P08572 1712 aa23.59■■□□□ 1.37
HOMER3-205ENST00000542541 SNAP91O60641 907 aa23.59■■□□□ 1.37
HOMER3-205ENST00000542541 RBP3P10745 1247 aa23.59■■□□□ 1.37
HOMER3-205ENST00000542541 NNMTP40261 264 aa23.59■■□□□ 1.37
HOMER3-205ENST00000542541 AP1B1Q10567 949 aa23.59■■□□□ 1.37
HOMER3-205ENST00000542541 SIX1Q15475 284 aaPredicted RBP23.59■■□□□ 1.37
HOMER3-205ENST00000542541 FBXO43Q4G163 708 aa23.59■■□□□ 1.37
HOMER3-205ENST00000542541 FSTL4Q6MZW2 842 aa23.59■■□□□ 1.37
HOMER3-205ENST00000542541 METTL3Q86U44 580 aaKnown RBP23.59■■□□□ 1.37
HOMER3-205ENST00000542541 CDKL3Q8IVW4 592 aaPredicted RBP23.59■■□□□ 1.37
HOMER3-205ENST00000542541 KCNV2Q8TDN2 545 aa23.59■■□□□ 1.37
HOMER3-205ENST00000542541 FATE1Q969F0 183 aa23.59■■□□□ 1.37
HOMER3-205ENST00000542541 ZNF599Q96NL3 588 aa23.59■■□□□ 1.37
HOMER3-205ENST00000542541 LGMNQ99538 433 aa23.59■■□□□ 1.37
HOMER3-205ENST00000542541 COL4A3Q01955 1670 aa23.59■■□□□ 1.37
HOMER3-205ENST00000542541 TRIOO75962 3097 aa23.58■■□□□ 1.37
HOMER3-205ENST00000542541 KRBA1A5PL33 1030 aa23.58■■□□□ 1.36
HOMER3-205ENST00000542541 J3KR12 359 aa23.58■■□□□ 1.36
HOMER3-205ENST00000542541 MTSS1O43312 755 aa23.58■■□□□ 1.36
HOMER3-205ENST00000542541 SRPRAP08240 638 aaKnown RBP23.58■■□□□ 1.36
HOMER3-205ENST00000542541 NUMBP49757 651 aa23.58■■□□□ 1.36
HOMER3-205ENST00000542541 ST8SIA6P61647 398 aa23.58■■□□□ 1.36
HOMER3-205ENST00000542541 WHAMMP3Q1A5X7 153 aa23.58■■□□□ 1.36
HOMER3-205ENST00000542541 SLC45A4Q5BKX6 768 aa23.58■■□□□ 1.36
HOMER3-205ENST00000542541 DRICH1Q6PGQ1 229 aaPredicted RBP23.58■■□□□ 1.36
HOMER3-205ENST00000542541 DARS2Q6PI48 645 aaKnown RBP23.58■■□□□ 1.36
HOMER3-205ENST00000542541 ARHGAP36Q6ZRI8 547 aa23.58■■□□□ 1.36
HOMER3-205ENST00000542541 CCDC13Q8IYE1 715 aa23.58■■□□□ 1.36
HOMER3-205ENST00000542541 SLC35B2Q8TB61 432 aa23.58■■□□□ 1.36
HOMER3-205ENST00000542541 C1orf54Q8WWF1 131 aa23.58■■□□□ 1.36
HOMER3-205ENST00000542541 CASKIN2Q8WXE0 1202 aa23.58■■□□□ 1.36
HOMER3-205ENST00000542541 AP1M1Q9BXS5 423 aa23.58■■□□□ 1.36
HOMER3-205ENST00000542541 SMARCAL1Q9NZC9 954 aa23.58■■□□□ 1.36
HOMER3-205ENST00000542541 ERVW-1Q9UQF0 538 aa23.58■■□□□ 1.36
HOMER3-205ENST00000542541 F5P12259 2224 aa23.58■■□□□ 1.36
HOMER3-205ENST00000542541 BDP1A6H8Y1 2624 aa23.57■■□□□ 1.36
HOMER3-205ENST00000542541 SHISA7A6NL88 538 aa23.57■■□□□ 1.36
HOMER3-205ENST00000542541 NPC1O15118 1278 aa23.57■■□□□ 1.36
HOMER3-205ENST00000542541 MATN3O15232 486 aa23.57■■□□□ 1.36
HOMER3-205ENST00000542541 LIASO43766 372 aa23.57■■□□□ 1.36
HOMER3-205ENST00000542541 CD72P21854 359 aa23.57■■□□□ 1.36
HOMER3-205ENST00000542541 GLDCP23378 1020 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms