RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 GMEB2Q9UKD1 530 aa9.97□□□□□ -0.81
YBX3-212ENST00000542002 USP18Q9UMW8 372 aa9.97□□□□□ -0.81
YBX3-212ENST00000542002 HS3ST2Q9Y278 367 aa9.97□□□□□ -0.81
YBX3-212ENST00000542002 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.97□□□□□ -0.81
YBX3-212ENST00000542002 SCINQ9Y6U3 715 aa9.97□□□□□ -0.81
YBX3-212ENST00000542002 DMXL1Q9Y485 3027 aa9.97□□□□□ -0.81
YBX3-212ENST00000542002 DCHS1Q96JQ0 3298 aa9.97□□□□□ -0.81
YBX3-212ENST00000542002 LAMA1P25391 3075 aa9.96□□□□□ -0.81
YBX3-212ENST00000542002 PIEZO1Q92508 2521 aa9.96□□□□□ -0.81
YBX3-212ENST00000542002 EDDM13A0A1B0GTR0 161 aa9.96□□□□□ -0.82
YBX3-212ENST00000542002 WASH4PA8MWX3 477 aa9.96□□□□□ -0.82
YBX3-212ENST00000542002 PATE3B3GLJ2 98 aa9.96□□□□□ -0.82
YBX3-212ENST00000542002 CBX4O00257 560 aa9.96□□□□□ -0.82
YBX3-212ENST00000542002 PLK4O00444 970 aa9.96□□□□□ -0.82
YBX3-212ENST00000542002 MID1O15344 667 aa9.96□□□□□ -0.82
YBX3-212ENST00000542002 ZBTB24O43167 697 aaPredicted RBP9.96□□□□□ -0.82
YBX3-212ENST00000542002 MAOBP27338 520 aa9.96□□□□□ -0.82
YBX3-212ENST00000542002 EPHB2P29323 1055 aa9.96□□□□□ -0.82
YBX3-212ENST00000542002 CD6P30203 668 aa9.96□□□□□ -0.82
YBX3-212ENST00000542002 ACSL1P33121 698 aa9.96□□□□□ -0.82
YBX3-212ENST00000542002 PCK1P35558 622 aa9.96□□□□□ -0.82
YBX3-212ENST00000542002 DHPSP49366 369 aaPredicted RBP9.96□□□□□ -0.82
YBX3-212ENST00000542002 AIF1P55008 147 aa9.96□□□□□ -0.82
YBX3-212ENST00000542002 RPL6Q02878 288 aaKnown RBP9.96□□□□□ -0.82
YBX3-212ENST00000542002 CREB5Q02930 508 aa9.96□□□□□ -0.82
YBX3-212ENST00000542002 BYSLQ13895 437 aaKnown RBP9.96□□□□□ -0.82
YBX3-212ENST00000542002 ELF2Q15723 593 aa9.96□□□□□ -0.82
YBX3-212ENST00000542002 CSRP2Q16527 193 aa9.96□□□□□ -0.82
YBX3-212ENST00000542002 ACCSLQ4AC99 568 aa9.96□□□□□ -0.82
YBX3-212ENST00000542002 ATP13A4Q4VNC1 1196 aa9.96□□□□□ -0.82
YBX3-212ENST00000542002 ZNF783Q6ZMS7 281 aa9.96□□□□□ -0.82
YBX3-212ENST00000542002 Q6ZVU0 165 aa9.96□□□□□ -0.82
YBX3-212ENST00000542002 LPCAT2Q7L5N7 544 aa9.96□□□□□ -0.82
YBX3-212ENST00000542002 MMAAQ8IVH4 418 aaKnown RBP9.96□□□□□ -0.82
YBX3-212ENST00000542002 TP53INP2Q8IXH6 220 aa9.96□□□□□ -0.82
YBX3-212ENST00000542002 AADATQ8N5Z0 425 aa9.96□□□□□ -0.82
YBX3-212ENST00000542002 DCAF4L2Q8NA75 395 aa9.96□□□□□ -0.82
YBX3-212ENST00000542002 ATP11CQ8NB49 1132 aa9.96□□□□□ -0.82
YBX3-212ENST00000542002 OR2A12Q8NGT7 310 aa9.96□□□□□ -0.82
YBX3-212ENST00000542002 MRFAP1L1Q96HT8 127 aa9.96□□□□□ -0.82
YBX3-212ENST00000542002 SPACA7Q96KW9 195 aa9.96□□□□□ -0.82
YBX3-212ENST00000542002 GPR174Q9BXC1 333 aa9.96□□□□□ -0.82
YBX3-212ENST00000542002 DHX35Q9H5Z1 703 aaKnown RBP9.96□□□□□ -0.82
YBX3-212ENST00000542002 OSGEPQ9NPF4 335 aa9.96□□□□□ -0.82
YBX3-212ENST00000542002 ZNHIT6Q9NWK9 470 aaKnown RBP9.96□□□□□ -0.82
YBX3-212ENST00000542002 CWC15Q9P013 229 aaKnown RBP9.96□□□□□ -0.82
YBX3-212ENST00000542002 ANAPC7Q9UJX3 599 aa9.96□□□□□ -0.82
YBX3-212ENST00000542002 PPM1HQ9ULR3 514 aa9.96□□□□□ -0.82
YBX3-212ENST00000542002 TFR2Q9UP52 801 aa9.96□□□□□ -0.82
YBX3-212ENST00000542002 AP4E1Q9UPM8 1137 aa9.96□□□□□ -0.82
YBX3-212ENST00000542002 MFHAS1Q9Y4C4 1052 aa9.96□□□□□ -0.82
YBX3-212ENST00000542002 SLCO1B1Q9Y6L6 691 aa9.96□□□□□ -0.82
YBX3-212ENST00000542002 OTOGLQ3ZCN5 2332 aa9.96□□□□□ -0.82
YBX3-212ENST00000542002 ZNF292O60281 2723 aa9.96□□□□□ -0.82
YBX3-212ENST00000542002 ABCA7Q8IZY2 2146 aa9.95□□□□□ -0.82
YBX3-212ENST00000542002 EP300Q09472 2414 aaPredicted RBP9.95□□□□□ -0.82
YBX3-212ENST00000542002 C10orf142B7Z368 130 aa9.95□□□□□ -0.82
YBX3-212ENST00000542002 AKR1B10O60218 316 aa9.95□□□□□ -0.82
YBX3-212ENST00000542002 RNF8O76064 485 aa9.95□□□□□ -0.82
YBX3-212ENST00000542002 CTSLP07711 333 aa9.95□□□□□ -0.82
YBX3-212ENST00000542002 ZNF806P0C7X5 589 aa9.95□□□□□ -0.82
YBX3-212ENST00000542002 RARAP10276 462 aa9.95□□□□□ -0.82
YBX3-212ENST00000542002 ACADMP11310 421 aa9.95□□□□□ -0.82
YBX3-212ENST00000542002 GOT1P17174 413 aa9.95□□□□□ -0.82
YBX3-212ENST00000542002 IL4RP24394 825 aa9.95□□□□□ -0.82
YBX3-212ENST00000542002 SLC8A1P32418 973 aa9.95□□□□□ -0.82
YBX3-212ENST00000542002 MPLP40238 635 aa9.95□□□□□ -0.82
YBX3-212ENST00000542002 MAPKAPK2P49137 400 aa9.95□□□□□ -0.82
YBX3-212ENST00000542002 KRT83P78385 493 aa9.95□□□□□ -0.82
YBX3-212ENST00000542002 SLC25A11Q02978 314 aaKnown RBP9.95□□□□□ -0.82
YBX3-212ENST00000542002 ZNF33AQ06730 810 aa9.95□□□□□ -0.82
YBX3-212ENST00000542002 PIGHQ14442 188 aaPredicted RBP9.95□□□□□ -0.82
YBX3-212ENST00000542002 POLD3Q15054 466 aaPredicted RBP9.95□□□□□ -0.82
YBX3-212ENST00000542002 CST6Q15828 149 aa9.95□□□□□ -0.82
YBX3-212ENST00000542002 SMTNL2Q2TAL5 461 aa9.95□□□□□ -0.82
YBX3-212ENST00000542002 SPDYCQ5MJ68 293 aa9.95□□□□□ -0.82
YBX3-212ENST00000542002 ZNF776Q68DI1 518 aaPredicted RBP9.95□□□□□ -0.82
YBX3-212ENST00000542002 SLC36A4Q6YBV0 504 aa9.95□□□□□ -0.82
YBX3-212ENST00000542002 C11orf74Q86VG3 221 aa9.95□□□□□ -0.82
YBX3-212ENST00000542002 CNGA4Q8IV77 575 aa9.95□□□□□ -0.82
YBX3-212ENST00000542002 NIPA2Q8N8Q9 360 aa9.95□□□□□ -0.82
YBX3-212ENST00000542002 RTL3Q8N8U3 475 aaKnown RBP9.95□□□□□ -0.82
YBX3-212ENST00000542002 CHST14Q8NCH0 376 aa9.95□□□□□ -0.82
YBX3-212ENST00000542002 SLC35G2Q8TBE7 412 aa9.95□□□□□ -0.82
YBX3-212ENST00000542002 PIGKQ92643 395 aa9.95□□□□□ -0.82
YBX3-212ENST00000542002 HMCESQ96FZ2 354 aa9.95□□□□□ -0.82
YBX3-212ENST00000542002 CCDC42Q96M95 316 aa9.95□□□□□ -0.82
YBX3-212ENST00000542002 PPP1R9BQ96SB3 815 aa9.95□□□□□ -0.82
YBX3-212ENST00000542002 C2orf49Q9BVC5 232 aaPredicted RBP9.95□□□□□ -0.82
YBX3-212ENST00000542002 NEUROG2Q9H2A3 272 aa9.95□□□□□ -0.82
YBX3-212ENST00000542002 TNKS2Q9H2K2 1166 aa9.95□□□□□ -0.82
YBX3-212ENST00000542002 PABPC3Q9H361 631 aaKnown RBP9.95□□□□□ -0.82
YBX3-212ENST00000542002 C6orf106Q9H6K1 298 aaPredicted RBP9.95□□□□□ -0.82
YBX3-212ENST00000542002 RETREG1Q9H6L5 497 aa9.95□□□□□ -0.82
YBX3-212ENST00000542002 ZWILCHQ9H900 591 aa9.95□□□□□ -0.82
YBX3-212ENST00000542002 ATP13A1Q9HD20 1204 aa9.95□□□□□ -0.82
YBX3-212ENST00000542002 FSCN3Q9NQT6 498 aa9.95□□□□□ -0.82
YBX3-212ENST00000542002 PILRBQ9UKJ0 227 aa9.95□□□□□ -0.82
YBX3-212ENST00000542002 PCDHGA5Q9Y5G8 931 aa9.95□□□□□ -0.82
YBX3-212ENST00000542002 RIF1Q5UIP0 2472 aaKnown RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms