RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 IL10P22301 178 aa16.38■□□□□ 0.21
VARS2-212ENST00000542001 LRRC23Q53EV4 343 aaPredicted RBP16.38■□□□□ 0.21
VARS2-212ENST00000542001 GRTP1Q5TC63 336 aa16.38■□□□□ 0.21
VARS2-212ENST00000542001 KYAT3Q6YP21 454 aaKnown RBP16.38■□□□□ 0.21
VARS2-212ENST00000542001 C16orf59Q7L2K0 433 aa16.38■□□□□ 0.21
VARS2-212ENST00000542001 FAM35AQ86V20 835 aa16.38■□□□□ 0.21
VARS2-212ENST00000542001 TP53INP2Q8IXH6 220 aa16.38■□□□□ 0.21
VARS2-212ENST00000542001 SCAMP5Q8TAC9 235 aa16.38■□□□□ 0.21
VARS2-212ENST00000542001 CPNE1Q99829 537 aa16.38■□□□□ 0.21
VARS2-212ENST00000542001 SYT11Q9BT88 431 aa16.38■□□□□ 0.21
VARS2-212ENST00000542001 XYLT2Q9H1B5 865 aa16.38■□□□□ 0.21
VARS2-212ENST00000542001 LRMDAQ9H2I8 198 aa16.38■□□□□ 0.21
VARS2-212ENST00000542001 NRCAMQ92823 1304 aa16.38■□□□□ 0.21
VARS2-212ENST00000542001 UBR2Q8IWV8 1755 aa16.38■□□□□ 0.21
VARS2-212ENST00000542001 NEMP2A6NFY4 417 aa16.38■□□□□ 0.21
VARS2-212ENST00000542001 SPDYE5A6NIY4 337 aa16.38■□□□□ 0.21
VARS2-212ENST00000542001 UBDO15205 165 aa16.38■□□□□ 0.21
VARS2-212ENST00000542001 GPR182O15218 404 aa16.38■□□□□ 0.21
VARS2-212ENST00000542001 MPP1Q00013 466 aa16.38■□□□□ 0.21
VARS2-212ENST00000542001 OTUD3Q5T2D3 398 aaPredicted RBP16.38■□□□□ 0.21
VARS2-212ENST00000542001 RNF220Q5VTB9 566 aa16.38■□□□□ 0.21
VARS2-212ENST00000542001 B3GNT9Q6UX72 402 aa16.38■□□□□ 0.21
VARS2-212ENST00000542001 DEFB128Q7Z7B8 93 aa16.38■□□□□ 0.21
VARS2-212ENST00000542001 DENND6AQ8IWF6 608 aa16.38■□□□□ 0.21
VARS2-212ENST00000542001 TTC36A6NLP5 189 aa16.38■□□□□ 0.21
VARS2-212ENST00000542001 H0Y626 953 aa16.38■□□□□ 0.21
VARS2-212ENST00000542001 ITM2AO43736 263 aa16.38■□□□□ 0.21
VARS2-212ENST00000542001 TRIM16O95361 564 aa16.38■□□□□ 0.21
VARS2-212ENST00000542001 MMP3P08254 477 aa16.38■□□□□ 0.21
VARS2-212ENST00000542001 WEE1P30291 646 aa16.38■□□□□ 0.21
VARS2-212ENST00000542001 RGS2P41220 211 aa16.38■□□□□ 0.21
VARS2-212ENST00000542001 ZDHHC17Q8IUH5 632 aa16.38■□□□□ 0.21
VARS2-212ENST00000542001 FNIP1Q8TF40 1166 aa16.38■□□□□ 0.21
VARS2-212ENST00000542001 LRRC39Q96DD0 335 aa16.38■□□□□ 0.21
VARS2-212ENST00000542001 ZBTB18Q99592 522 aa16.38■□□□□ 0.21
VARS2-212ENST00000542001 COG4Q9H9E3 785 aa16.38■□□□□ 0.21
VARS2-212ENST00000542001 RGS18Q9NS28 235 aa16.38■□□□□ 0.21
VARS2-212ENST00000542001 RNF112Q9ULX5 631 aa16.38■□□□□ 0.21
VARS2-212ENST00000542001 SLC12A4Q9UP95 1085 aa16.38■□□□□ 0.21
VARS2-212ENST00000542001 AMHP03971 560 aa16.37■□□□□ 0.21
VARS2-212ENST00000542001 SATB1Q01826 763 aa16.37■□□□□ 0.21
VARS2-212ENST00000542001 ACSBG2Q5FVE4 666 aa16.37■□□□□ 0.21
VARS2-212ENST00000542001 IQSEC1Q6DN90 963 aa16.37■□□□□ 0.21
VARS2-212ENST00000542001 CLEC4FQ8N1N0 589 aa16.37■□□□□ 0.21
VARS2-212ENST00000542001 ATAD1Q8NBU5 361 aa16.37■□□□□ 0.21
VARS2-212ENST00000542001 TSPAN17Q96FV3 270 aa16.37■□□□□ 0.21
VARS2-212ENST00000542001 VPS50Q96JG6 964 aa16.37■□□□□ 0.21
VARS2-212ENST00000542001 FCRL2Q96LA5 508 aaPredicted RBP16.37■□□□□ 0.21
VARS2-212ENST00000542001 DUSP16Q9BY84 665 aa16.37■□□□□ 0.21
VARS2-212ENST00000542001 ZFYVE28Q9HCC9 887 aa16.37■□□□□ 0.21
VARS2-212ENST00000542001 MID1IP1Q9NPA3 183 aa16.37■□□□□ 0.21
VARS2-212ENST00000542001 PAPOLBQ9NRJ5 636 aaKnown RBP16.37■□□□□ 0.21
VARS2-212ENST00000542001 HBS1LQ9Y450 684 aaKnown RBP16.37■□□□□ 0.21
VARS2-212ENST00000542001 TBX4P57082 545 aa16.37■□□□□ 0.21
VARS2-212ENST00000542001 PFKFB4Q16877 469 aa16.37■□□□□ 0.21
VARS2-212ENST00000542001 SLC25A52Q3SY17 297 aa16.37■□□□□ 0.21
VARS2-212ENST00000542001 TMEM198Q66K66 360 aa16.37■□□□□ 0.21
VARS2-212ENST00000542001 DCP1BQ8IZD4 617 aaKnown RBP16.37■□□□□ 0.21
VARS2-212ENST00000542001 SNRNP27Q8WVK2 155 aaKnown RBP16.37■□□□□ 0.21
VARS2-212ENST00000542001 C10orf82Q8WW14 230 aa16.37■□□□□ 0.21
VARS2-212ENST00000542001 ZMAT2Q96NC0 199 aaKnown RBP16.37■□□□□ 0.21
VARS2-212ENST00000542001 PRPF18Q99633 342 aaKnown RBP16.37■□□□□ 0.21
VARS2-212ENST00000542001 NPAS2Q99743 824 aa16.37■□□□□ 0.21
VARS2-212ENST00000542001 KLHL4Q9C0H6 718 aa16.37■□□□□ 0.21
VARS2-212ENST00000542001 BPIFA1Q9NP55 256 aa16.37■□□□□ 0.21
VARS2-212ENST00000542001 CASS4Q9NQ75 786 aa16.37■□□□□ 0.21
VARS2-212ENST00000542001 PSAT1Q9Y617 370 aa16.37■□□□□ 0.21
VARS2-212ENST00000542001 FBXO21O94952 628 aa16.37■□□□□ 0.21
VARS2-212ENST00000542001 IQCF3P0C7M6 154 aa16.37■□□□□ 0.21
VARS2-212ENST00000542001 CNTFP26441 200 aa16.37■□□□□ 0.21
VARS2-212ENST00000542001 CCL14Q16627 93 aa16.37■□□□□ 0.21
VARS2-212ENST00000542001 AMIGO2Q86SJ2 522 aa16.37■□□□□ 0.21
VARS2-212ENST00000542001 LPCAT1Q8NF37 534 aa16.37■□□□□ 0.21
VARS2-212ENST00000542001 CALML6Q8TD86 181 aa16.37■□□□□ 0.21
VARS2-212ENST00000542001 DCAKDQ8WVC6 231 aa16.37■□□□□ 0.21
VARS2-212ENST00000542001 MCRS1Q96EZ8 462 aa16.37■□□□□ 0.21
VARS2-212ENST00000542001 HBEGFQ99075 208 aa16.37■□□□□ 0.21
VARS2-212ENST00000542001 TBL1YQ9BQ87 522 aa16.37■□□□□ 0.21
VARS2-212ENST00000542001 MCM8Q9UJA3 840 aa16.37■□□□□ 0.21
VARS2-212ENST00000542001 SYNDIG1LA6NDD5 238 aa16.36■□□□□ 0.21
VARS2-212ENST00000542001 SOAT2O75908 522 aa16.36■□□□□ 0.21
VARS2-212ENST00000542001 LRIG2O94898 1065 aa16.36■□□□□ 0.21
VARS2-212ENST00000542001 POU4F1Q01851 419 aa16.36■□□□□ 0.21
VARS2-212ENST00000542001 DUSP28Q4G0W2 176 aa16.36■□□□□ 0.21
VARS2-212ENST00000542001 SPANXN3Q5MJ09 141 aa16.36■□□□□ 0.21
VARS2-212ENST00000542001 RHBDF2Q6PJF5 856 aa16.36■□□□□ 0.21
VARS2-212ENST00000542001 SEMA4BQ9NPR2 832 aaPredicted RBP16.36■□□□□ 0.21
VARS2-212ENST00000542001 HPS4Q9NQG7 708 aa16.36■□□□□ 0.21
VARS2-212ENST00000542001 BTRCQ9Y297 605 aa16.36■□□□□ 0.21
VARS2-212ENST00000542001 RAMP2O60895 175 aa16.36■□□□□ 0.21
VARS2-212ENST00000542001 ANPEPP15144 967 aa16.36■□□□□ 0.21
VARS2-212ENST00000542001 FMO4P31512 558 aa16.36■□□□□ 0.21
VARS2-212ENST00000542001 SEMA5AQ13591 1074 aa16.36■□□□□ 0.21
VARS2-212ENST00000542001 NOMO2Q5JPE7 1267 aa16.36■□□□□ 0.21
VARS2-212ENST00000542001 CIR1Q86X95 450 aaPredicted RBP16.36■□□□□ 0.21
VARS2-212ENST00000542001 ZNF781Q8N8C0 355 aa16.36■□□□□ 0.21
VARS2-212ENST00000542001 BHLHE22Q8NFJ8 381 aaPredicted RBP16.36■□□□□ 0.21
VARS2-212ENST00000542001 PPTC7Q8NI37 304 aa16.36■□□□□ 0.21
VARS2-212ENST00000542001 WDR60Q8WVS4 1066 aa16.36■□□□□ 0.21
VARS2-212ENST00000542001 PBXIP1Q96AQ6 731 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms