RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 ZSCAN22P10073 491 aaPredicted RBP5.8□□□□□ -1.48
CPSF7-220ENST00000541963 ALOX15P16050 662 aaPredicted RBP5.8□□□□□ -1.48
CPSF7-220ENST00000541963 KCNA5P22460 613 aa5.8□□□□□ -1.48
CPSF7-220ENST00000541963 PEX2P28328 305 aa5.8□□□□□ -1.48
CPSF7-220ENST00000541963 PCSK1P29120 753 aa5.8□□□□□ -1.48
CPSF7-220ENST00000541963 MATR3P43243 847 aaKnown RBP eCLIP5.8□□□□□ -1.48
CPSF7-220ENST00000541963 OR1G1P47890 313 aa5.8□□□□□ -1.48
CPSF7-220ENST00000541963 NPTX2P47972 431 aa5.8□□□□□ -1.48
CPSF7-220ENST00000541963 NDUFV1P49821 464 aa5.8□□□□□ -1.48
CPSF7-220ENST00000541963 NKX6-1P78426 367 aaPredicted RBP5.8□□□□□ -1.48
CPSF7-220ENST00000541963 GRIK3Q13003 919 aa5.8□□□□□ -1.48
CPSF7-220ENST00000541963 SEMA5AQ13591 1074 aa5.8□□□□□ -1.48
CPSF7-220ENST00000541963 DHX8Q14562 1220 aaKnown RBP5.8□□□□□ -1.48
CPSF7-220ENST00000541963 KARSQ15046 597 aaKnown RBP5.8□□□□□ -1.48
CPSF7-220ENST00000541963 POLD3Q15054 466 aaPredicted RBP5.8□□□□□ -1.48
CPSF7-220ENST00000541963 KYAT1Q16773 422 aa5.8□□□□□ -1.48
CPSF7-220ENST00000541963 PABPC1LQ4VXU2 614 aaKnown RBP5.8□□□□□ -1.48
CPSF7-220ENST00000541963 ATF7IP2Q5U623 682 aa5.8□□□□□ -1.48
CPSF7-220ENST00000541963 ADGRE4PQ86SQ3 457 aa5.8□□□□□ -1.48
CPSF7-220ENST00000541963 RBM23Q86U06 439 aaKnown RBP5.8□□□□□ -1.48
CPSF7-220ENST00000541963 GPBP1Q86WP2 473 aa5.8□□□□□ -1.48
CPSF7-220ENST00000541963 MRPL43Q8N983 215 aaKnown RBP5.8□□□□□ -1.48
CPSF7-220ENST00000541963 LARP4BQ92615 738 aaKnown RBP5.8□□□□□ -1.48
CPSF7-220ENST00000541963 RAD54LQ92698 747 aa5.8□□□□□ -1.48
CPSF7-220ENST00000541963 IGSF21Q96ID5 467 aa5.8□□□□□ -1.48
CPSF7-220ENST00000541963 USP28Q96RU2 1077 aa5.8□□□□□ -1.48
CPSF7-220ENST00000541963 DMRTA2Q96SC8 542 aa5.8□□□□□ -1.48
CPSF7-220ENST00000541963 GAD1Q99259 594 aa5.8□□□□□ -1.48
CPSF7-220ENST00000541963 DPYSL5Q9BPU6 564 aa5.8□□□□□ -1.48
CPSF7-220ENST00000541963 PYM1Q9BRP8 204 aaKnown RBP5.8□□□□□ -1.48
CPSF7-220ENST00000541963 MRI1Q9BV20 369 aa5.8□□□□□ -1.48
CPSF7-220ENST00000541963 CCDC94Q9BW85 323 aaPredicted RBP5.8□□□□□ -1.48
CPSF7-220ENST00000541963 PACSIN1Q9BY11 444 aa5.8□□□□□ -1.48
CPSF7-220ENST00000541963 ZHX3Q9H4I2 956 aa5.8□□□□□ -1.48
CPSF7-220ENST00000541963 PARVGQ9HBI0 331 aa5.8□□□□□ -1.48
CPSF7-220ENST00000541963 POLD4Q9HCU8 107 aa5.8□□□□□ -1.48
CPSF7-220ENST00000541963 SIDT1Q9NXL6 827 aaKnown RBP5.8□□□□□ -1.48
CPSF7-220ENST00000541963 FBXO2Q9UK22 296 aaPredicted RBP5.8□□□□□ -1.48
CPSF7-220ENST00000541963 TNFSF13BQ9Y275 285 aa5.8□□□□□ -1.48
CPSF7-220ENST00000541963 PCDHGB6Q9Y5F9 930 aa5.8□□□□□ -1.48
CPSF7-220ENST00000541963 ATP6V1DQ9Y5K8 247 aa5.8□□□□□ -1.48
CPSF7-220ENST00000541963 COL4A4P53420 1690 aaPredicted RBP5.79□□□□□ -1.48
CPSF7-220ENST00000541963 NPEPPSL1A6NEC2 478 aa5.79□□□□□ -1.48
CPSF7-220ENST00000541963 PRR5-ARHGAP8B1AHC4 643 aa5.79□□□□□ -1.48
CPSF7-220ENST00000541963 INPPL1O15357 1258 aa5.79□□□□□ -1.48
CPSF7-220ENST00000541963 SLC16A4O15374 487 aa5.79□□□□□ -1.48
CPSF7-220ENST00000541963 CLDN3O15551 220 aa5.79□□□□□ -1.48
CPSF7-220ENST00000541963 PJA2O43164 708 aa5.79□□□□□ -1.48
CPSF7-220ENST00000541963 MFAP3LO75121 409 aa5.79□□□□□ -1.48
CPSF7-220ENST00000541963 TADA2AO75478 443 aa5.79□□□□□ -1.48
CPSF7-220ENST00000541963 TOM1L1O75674 476 aa5.79□□□□□ -1.48
CPSF7-220ENST00000541963 DDHD2O94830 711 aa5.79□□□□□ -1.48
CPSF7-220ENST00000541963 CD1AP06126 327 aa5.79□□□□□ -1.48
CPSF7-220ENST00000541963 CTSAP10619 480 aa5.79□□□□□ -1.48
CPSF7-220ENST00000541963 MCF2P10911 925 aa5.79□□□□□ -1.48
CPSF7-220ENST00000541963 RPL17P18621 184 aaKnown RBP5.79□□□□□ -1.48
CPSF7-220ENST00000541963 DNAJB1P25685 340 aa5.79□□□□□ -1.48
CPSF7-220ENST00000541963 MLH1P40692 756 aa5.79□□□□□ -1.48
CPSF7-220ENST00000541963 STAT6P42226 847 aa5.79□□□□□ -1.48
CPSF7-220ENST00000541963 NRIP1P48552 1158 aa5.79□□□□□ -1.48
CPSF7-220ENST00000541963 SLC11A1P49279 550 aa5.79□□□□□ -1.48
CPSF7-220ENST00000541963 SCNN1GP51170 649 aa5.79□□□□□ -1.48
CPSF7-220ENST00000541963 CLRN1P58418 232 aa5.79□□□□□ -1.48
CPSF7-220ENST00000541963 ADAM8P78325 824 aa5.79□□□□□ -1.48
CPSF7-220ENST00000541963 TFF2Q03403 129 aa5.79□□□□□ -1.48
CPSF7-220ENST00000541963 HYAL1Q12794 435 aa5.79□□□□□ -1.48
CPSF7-220ENST00000541963 CAMK1Q14012 370 aa5.79□□□□□ -1.48
CPSF7-220ENST00000541963 GALEQ14376 348 aa5.79□□□□□ -1.48
CPSF7-220ENST00000541963 GRM7Q14831 915 aa5.79□□□□□ -1.48
CPSF7-220ENST00000541963 DUSP6Q16828 381 aa5.79□□□□□ -1.48
CPSF7-220ENST00000541963 KHDC1LQ5JSQ8 128 aa5.79□□□□□ -1.48
CPSF7-220ENST00000541963 SPECC1Q5M775 1068 aa5.79□□□□□ -1.48
CPSF7-220ENST00000541963 FKBP15Q5T1M5 1219 aa5.79□□□□□ -1.48
CPSF7-220ENST00000541963 PLPP4Q5VZY2 271 aa5.79□□□□□ -1.48
CPSF7-220ENST00000541963 FAM173BQ6P4H8 233 aa5.79□□□□□ -1.48
CPSF7-220ENST00000541963 HAUS6Q7Z4H7 955 aa5.79□□□□□ -1.48
CPSF7-220ENST00000541963 TAX1BP1Q86VP1 789 aa5.79□□□□□ -1.48
CPSF7-220ENST00000541963 CDR2LQ86X02 465 aaPredicted RBP5.79□□□□□ -1.48
CPSF7-220ENST00000541963 ZNF280BQ86YH2 543 aa5.79□□□□□ -1.48
CPSF7-220ENST00000541963 PLXDC1Q8IUK5 500 aa5.79□□□□□ -1.48
CPSF7-220ENST00000541963 COLGALT2Q8IYK4 626 aa5.79□□□□□ -1.48
CPSF7-220ENST00000541963 VPS52Q8N1B4 723 aa5.79□□□□□ -1.48
CPSF7-220ENST00000541963 IQUBQ8NA54 791 aa5.79□□□□□ -1.48
CPSF7-220ENST00000541963 LINC00301Q8NCQ3 95 aa5.79□□□□□ -1.48
CPSF7-220ENST00000541963 KCNG4Q8TDN1 519 aa5.79□□□□□ -1.48
CPSF7-220ENST00000541963 CFHR4Q92496 578 aa5.79□□□□□ -1.48
CPSF7-220ENST00000541963 CASP10Q92851 521 aa5.79□□□□□ -1.48
CPSF7-220ENST00000541963 PMM1Q92871 262 aa5.79□□□□□ -1.48
CPSF7-220ENST00000541963 BICD1Q96G01 975 aa5.79□□□□□ -1.48
CPSF7-220ENST00000541963 BORCS6Q96GS4 357 aa5.79□□□□□ -1.48
CPSF7-220ENST00000541963 EPSTI1Q96J88 318 aa5.79□□□□□ -1.48
CPSF7-220ENST00000541963 ELAC2Q9BQ52 826 aaKnown RBP5.79□□□□□ -1.48
CPSF7-220ENST00000541963 KIFC3Q9BVG8 833 aa5.79□□□□□ -1.48
CPSF7-220ENST00000541963 CUEDC2Q9H467 287 aa5.79□□□□□ -1.48
CPSF7-220ENST00000541963 NXF3Q9H4D5 531 aaKnown RBP5.79□□□□□ -1.48
CPSF7-220ENST00000541963 PDZD7Q9H5P4 517 aa5.79□□□□□ -1.48
CPSF7-220ENST00000541963 KIAA1586Q9HCI6 787 aa5.79□□□□□ -1.48
CPSF7-220ENST00000541963 MRPL17Q9NRX2 175 aaKnown RBP5.79□□□□□ -1.48
CPSF7-220ENST00000541963 SLC38A7Q9NVC3 462 aa5.79□□□□□ -1.48
CPSF7-220ENST00000541963 PIH1D1Q9NWS0 290 aaKnown RBP5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms