RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 SLC39A8Q9C0K1 460 aa8.88□□□□□ -0.99
THBS3-210ENST00000541576 NKX2-4Q9H2Z4 354 aa8.88□□□□□ -0.99
THBS3-210ENST00000541576 CPQQ9Y646 472 aa8.88□□□□□ -0.99
THBS3-210ENST00000541576 SHROOM3Q8TF72 1996 aa8.88□□□□□ -0.99
THBS3-210ENST00000541576 ACSL3O95573 720 aa8.88□□□□□ -0.99
THBS3-210ENST00000541576 PTPN3P26045 913 aa8.88□□□□□ -0.99
THBS3-210ENST00000541576 HOXA9P31269 272 aa8.88□□□□□ -0.99
THBS3-210ENST00000541576 SLC6A4P31645 630 aa8.88□□□□□ -0.99
THBS3-210ENST00000541576 MDH1P40925 334 aaKnown RBP8.88□□□□□ -0.99
THBS3-210ENST00000541576 NDST2P52849 883 aa8.88□□□□□ -0.99
THBS3-210ENST00000541576 KCNJ11Q14654 390 aa8.88□□□□□ -0.99
THBS3-210ENST00000541576 RAB30Q15771 203 aa8.88□□□□□ -0.99
THBS3-210ENST00000541576 AFMIDQ63HM1 303 aa8.88□□□□□ -0.99
THBS3-210ENST00000541576 PPP2R2DQ66LE6 453 aa8.88□□□□□ -0.99
THBS3-210ENST00000541576 LRIG3Q6UXM1 1119 aa8.88□□□□□ -0.99
THBS3-210ENST00000541576 TRMT10CQ7L0Y3 403 aaKnown RBP8.88□□□□□ -0.99
THBS3-210ENST00000541576 RBM23Q86U06 439 aaKnown RBP8.88□□□□□ -0.99
THBS3-210ENST00000541576 ZNF567Q8N184 647 aa8.88□□□□□ -0.99
THBS3-210ENST00000541576 ARNTL2Q8WYA1 636 aa8.88□□□□□ -0.99
THBS3-210ENST00000541576 TSGA13Q96PP4 275 aa8.88□□□□□ -0.99
THBS3-210ENST00000541576 SAYSD1Q9NPB0 183 aa8.88□□□□□ -0.99
THBS3-210ENST00000541576 HCFC1R1Q9NWW0 138 aa8.88□□□□□ -0.99
THBS3-210ENST00000541576 NINJ2Q9NZG7 142 aa8.88□□□□□ -0.99
THBS3-210ENST00000541576 KLHL8Q9P2G9 620 aaPredicted RBP8.88□□□□□ -0.99
THBS3-210ENST00000541576 DPP7Q9UHL4 492 aa8.88□□□□□ -0.99
THBS3-210ENST00000541576 AGO1Q9UL18 857 aaKnown RBP8.88□□□□□ -0.99
THBS3-210ENST00000541576 DENND4CQ5VZ89 1909 aa8.88□□□□□ -0.99
THBS3-210ENST00000541576 TRAV19A0A0A6YYK7 116 aa8.88□□□□□ -0.99
THBS3-210ENST00000541576 F5H423 210 aaPredicted RBP8.88□□□□□ -0.99
THBS3-210ENST00000541576 XYLBO75191 536 aa8.88□□□□□ -0.99
THBS3-210ENST00000541576 TTC4O95801 387 aa8.88□□□□□ -0.99
THBS3-210ENST00000541576 APRTP07741 180 aa8.88□□□□□ -0.99
THBS3-210ENST00000541576 HNRNPA1P09651 372 aaKnown RBP eCLIP8.88□□□□□ -0.99
THBS3-210ENST00000541576 GJA1P17302 382 aa8.88□□□□□ -0.99
THBS3-210ENST00000541576 PTPN2P17706 415 aa8.88□□□□□ -0.99
THBS3-210ENST00000541576 CCNCP24863 283 aa8.88□□□□□ -0.99
THBS3-210ENST00000541576 FDFT1P37268 417 aa8.88□□□□□ -0.99
THBS3-210ENST00000541576 MAGEA4P43358 317 aa8.88□□□□□ -0.99
THBS3-210ENST00000541576 ARL4CP56559 192 aa8.88□□□□□ -0.99
THBS3-210ENST00000541576 IFFO1Q0D2I5 559 aa8.88□□□□□ -0.99
THBS3-210ENST00000541576 HIF1AQ16665 826 aa8.88□□□□□ -0.99
THBS3-210ENST00000541576 C5orf22Q49AR2 442 aa8.88□□□□□ -0.99
THBS3-210ENST00000541576 RABGAP1LQ5R372 815 aa8.88□□□□□ -0.99
THBS3-210ENST00000541576 ADGRF1Q5T601 910 aa8.88□□□□□ -0.99
THBS3-210ENST00000541576 DENND2CQ68D51 928 aa8.88□□□□□ -0.99
THBS3-210ENST00000541576 ARHGAP36Q6ZRI8 547 aa8.88□□□□□ -0.99
THBS3-210ENST00000541576 CENPUQ71F23 418 aa8.88□□□□□ -0.99
THBS3-210ENST00000541576 PID1Q7Z2X4 250 aa8.88□□□□□ -0.99
THBS3-210ENST00000541576 CIR1Q86X95 450 aaPredicted RBP8.88□□□□□ -0.99
THBS3-210ENST00000541576 RELL1Q8IUW5 271 aa8.88□□□□□ -0.99
THBS3-210ENST00000541576 LRRC49Q8IUZ0 686 aa8.88□□□□□ -0.99
THBS3-210ENST00000541576 NSMCE1Q8WV22 266 aa8.88□□□□□ -0.99
THBS3-210ENST00000541576 WBP2Q969T9 261 aa8.88□□□□□ -0.99
THBS3-210ENST00000541576 VAT1Q99536 393 aa8.88□□□□□ -0.99
THBS3-210ENST00000541576 DDX50Q9BQ39 737 aaKnown RBP8.88□□□□□ -0.99
THBS3-210ENST00000541576 HCFC2Q9Y5Z7 792 aa8.88□□□□□ -0.99
THBS3-210ENST00000541576 FGF19O95750 216 aa8.87□□□□□ -0.99
THBS3-210ENST00000541576 NUDT17P0C025 328 aa8.87□□□□□ -0.99
THBS3-210ENST00000541576 OR1E1P30953 314 aa8.87□□□□□ -0.99
THBS3-210ENST00000541576 CCR2P41597 374 aa8.87□□□□□ -0.99
THBS3-210ENST00000541576 MAGEA6P43360 314 aa8.87□□□□□ -0.99
THBS3-210ENST00000541576 MAPKAPK2P49137 400 aa8.87□□□□□ -0.99
THBS3-210ENST00000541576 PAPOLAP51003 745 aaKnown RBP8.87□□□□□ -0.99
THBS3-210ENST00000541576 EPHA5P54756 1037 aa8.87□□□□□ -0.99
THBS3-210ENST00000541576 SLC7A9P82251 487 aa8.87□□□□□ -0.99
THBS3-210ENST00000541576 PREPLQ4J6C6 727 aaPredicted RBP8.87□□□□□ -0.99
THBS3-210ENST00000541576 ELMSAN1Q6PJG2 1045 aa8.87□□□□□ -0.99
THBS3-210ENST00000541576 PPP1R21Q6ZMI0 780 aa8.87□□□□□ -0.99
THBS3-210ENST00000541576 PDIK1LQ8N165 341 aa8.87□□□□□ -0.99
THBS3-210ENST00000541576 CFAP52Q8N1V2 620 aa8.87□□□□□ -0.99
THBS3-210ENST00000541576 MGARPQ8TDB4 240 aa8.87□□□□□ -0.99
THBS3-210ENST00000541576 WDR83Q9BRX9 315 aaKnown RBP8.87□□□□□ -0.99
THBS3-210ENST00000541576 NOL6Q9H6R4 1146 aaKnown RBP8.87□□□□□ -0.99
THBS3-210ENST00000541576 MLXIPLQ9NP71 852 aa8.87□□□□□ -0.99
THBS3-210ENST00000541576 ZNF212Q9UDV6 495 aa8.87□□□□□ -0.99
THBS3-210ENST00000541576 RASA4BC9J798 803 aa8.87□□□□□ -0.99
THBS3-210ENST00000541576 NRG2O14511 850 aaPredicted RBP8.87□□□□□ -0.99
THBS3-210ENST00000541576 ALOX15BO15296 676 aa8.87□□□□□ -0.99
THBS3-210ENST00000541576 RASA4O43374 803 aa8.87□□□□□ -0.99
THBS3-210ENST00000541576 MAFKO60675 156 aa8.87□□□□□ -0.99
THBS3-210ENST00000541576 RAMP2O60895 175 aa8.87□□□□□ -0.99
THBS3-210ENST00000541576 FSBPO95073 299 aa8.87□□□□□ -0.99
THBS3-210ENST00000541576 LATS1O95835 1130 aa8.87□□□□□ -0.99
THBS3-210ENST00000541576 MYZAPP0CAP1 466 aa8.87□□□□□ -0.99
THBS3-210ENST00000541576 PFKLP17858 780 aa8.87□□□□□ -0.99
THBS3-210ENST00000541576 ZBTB17Q13105 803 aa8.87□□□□□ -0.99
THBS3-210ENST00000541576 SEMA5AQ13591 1074 aa8.87□□□□□ -0.99
THBS3-210ENST00000541576 PARP6Q2NL67 630 aa8.87□□□□□ -0.99
THBS3-210ENST00000541576 KRT71Q3SY84 523 aa8.87□□□□□ -0.99
THBS3-210ENST00000541576 TEX44Q53QW1 395 aa8.87□□□□□ -0.99
THBS3-210ENST00000541576 STXBP5Q5T5C0 1151 aa8.87□□□□□ -0.99
THBS3-210ENST00000541576 TIGD7Q6NT04 549 aaPredicted RBP8.87□□□□□ -0.99
THBS3-210ENST00000541576 ADGRD2Q7Z7M1 963 aa8.87□□□□□ -0.99
THBS3-210ENST00000541576 CACNA2D3Q8IZS8 1091 aa8.87□□□□□ -0.99
THBS3-210ENST00000541576 KIF2BQ8N4N8 673 aa8.87□□□□□ -0.99
THBS3-210ENST00000541576 TTC16Q8NEE8 873 aa8.87□□□□□ -0.99
THBS3-210ENST00000541576 SHKBP1Q8TBC3 707 aa8.87□□□□□ -0.99
THBS3-210ENST00000541576 ZSCAN18Q8TBC5 510 aaPredicted RBP8.87□□□□□ -0.99
THBS3-210ENST00000541576 RSRC1Q96IZ7 334 aaKnown RBP8.87□□□□□ -0.99
THBS3-210ENST00000541576 PHACTR1Q9C0D0 580 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms