RNA–Protein interactions for RNA: ENST00000540925.5

USP28-209, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 4

Gene USP28, Length 561 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-209ENST00000540925 ATMINO43313 823 aaPredicted RBP14.55□□□□□ -0.08
USP28-209ENST00000540925 SNAP91O60641 907 aa14.55□□□□□ -0.08
USP28-209ENST00000540925 RTN2O75298 545 aa14.55□□□□□ -0.08
USP28-209ENST00000540925 ZNF821O75541 412 aaPredicted RBP14.55□□□□□ -0.08
USP28-209ENST00000540925 FTLP02792 175 aaPredicted RBP14.55□□□□□ -0.08
USP28-209ENST00000540925 DNTTP04053 509 aa14.55□□□□□ -0.08
USP28-209ENST00000540925 PLEKP08567 350 aaPredicted RBP14.55□□□□□ -0.08
USP28-209ENST00000540925 SERPINF2P08697 491 aa14.55□□□□□ -0.08
USP28-209ENST00000540925 SRCP12931 536 aa14.55□□□□□ -0.08
USP28-209ENST00000540925 RHOQP17081 205 aa14.55□□□□□ -0.08
USP28-209ENST00000540925 OR1E1P30953 314 aa14.55□□□□□ -0.08
USP28-209ENST00000540925 HNRNPH3P31942 346 aaKnown RBP14.55□□□□□ -0.08
USP28-209ENST00000540925 L1CAMP32004 1257 aa14.55□□□□□ -0.08
USP28-209ENST00000540925 AIF1P55008 147 aa14.55□□□□□ -0.08
USP28-209ENST00000540925 ELAVL3Q14576 367 aaKnown RBP14.55□□□□□ -0.08
USP28-209ENST00000540925 DUOXA1Q1HG43 343 aa14.55□□□□□ -0.08
USP28-209ENST00000540925 RABEPKQ7Z6M1 372 aa14.55□□□□□ -0.08
USP28-209ENST00000540925 MMAAQ8IVH4 418 aaKnown RBP14.55□□□□□ -0.08
USP28-209ENST00000540925 AADATQ8N5Z0 425 aa14.55□□□□□ -0.08
USP28-209ENST00000540925 OR7D4Q8NG98 312 aa14.55□□□□□ -0.08
USP28-209ENST00000540925 CEP76Q8TAP6 659 aa14.55□□□□□ -0.08
USP28-209ENST00000540925 FNIP1Q8TF40 1166 aa14.55□□□□□ -0.08
USP28-209ENST00000540925 ORAI3Q9BRQ5 295 aa14.55□□□□□ -0.08
USP28-209ENST00000540925 ACE2Q9BYF1 805 aaPredicted RBP14.55□□□□□ -0.08
USP28-209ENST00000540925 TRIM7Q9C029 511 aa14.55□□□□□ -0.08
USP28-209ENST00000540925 C6orf106Q9H6K1 298 aaPredicted RBP14.55□□□□□ -0.08
USP28-209ENST00000540925 SGK2Q9HBY8 427 aa14.55□□□□□ -0.08
USP28-209ENST00000540925 TMEM248Q9NWD8 314 aa14.55□□□□□ -0.08
USP28-209ENST00000540925 FZD10Q9ULW2 581 aa14.55□□□□□ -0.08
USP28-209ENST00000540925 NENFQ9UMX5 172 aa14.55□□□□□ -0.08
USP28-209ENST00000540925 BZW2Q9Y6E2 419 aaKnown RBP14.55□□□□□ -0.08
USP28-209ENST00000540925 CHD6Q8TD26 2715 aa14.54□□□□□ -0.08
USP28-209ENST00000540925 MID1O15344 667 aa14.54□□□□□ -0.08
USP28-209ENST00000540925 CD160O95971 181 aa14.54□□□□□ -0.08
USP28-209ENST00000540925 SERPING1P05155 500 aa14.54□□□□□ -0.08
USP28-209ENST00000540925 GLDCP23378 1020 aa14.54□□□□□ -0.08
USP28-209ENST00000540925 NNMTP40261 264 aa14.54□□□□□ -0.08
USP28-209ENST00000540925 MAPKAPK2P49137 400 aa14.54□□□□□ -0.08
USP28-209ENST00000540925 KRT83P78385 493 aa14.54□□□□□ -0.08
USP28-209ENST00000540925 GNA12Q03113 381 aa14.54□□□□□ -0.08
USP28-209ENST00000540925 NFKBIBQ15653 356 aa14.54□□□□□ -0.08
USP28-209ENST00000540925 DLG2Q15700 870 aa14.54□□□□□ -0.08
USP28-209ENST00000540925 TTC31Q49AM3 519 aaPredicted RBP14.54□□□□□ -0.08
USP28-209ENST00000540925 WDR45BQ5MNZ6 344 aa14.54□□□□□ -0.08
USP28-209ENST00000540925 SYCP2LQ5T4T6 812 aa14.54□□□□□ -0.08
USP28-209ENST00000540925 DCAF12L1Q5VU92 463 aa14.54□□□□□ -0.08
USP28-209ENST00000540925 CYP4V2Q6ZWL3 525 aaPredicted RBP14.54□□□□□ -0.08
USP28-209ENST00000540925 DGLUCYQ7Z3D6 616 aa14.54□□□□□ -0.08
USP28-209ENST00000540925 TMC6Q7Z403 805 aa14.54□□□□□ -0.08
USP28-209ENST00000540925 SLFN11Q7Z7L1 901 aa14.54□□□□□ -0.08
USP28-209ENST00000540925 FAM124AQ86V42 546 aa14.54□□□□□ -0.08
USP28-209ENST00000540925 PYROXD2Q8N2H3 581 aa14.54□□□□□ -0.08
USP28-209ENST00000540925 BTBD1Q9H0C5 482 aa14.54□□□□□ -0.08
USP28-209ENST00000540925 TSPY26PQ9H489 355 aa14.54□□□□□ -0.08
USP28-209ENST00000540925 SLC25A13Q9UJS0 675 aa14.54□□□□□ -0.08
USP28-209ENST00000540925 PPM1HQ9ULR3 514 aa14.54□□□□□ -0.08
USP28-209ENST00000540925 FZD4Q9ULV1 537 aa14.54□□□□□ -0.08
USP28-209ENST00000540925 SLC6A14Q9UN76 642 aa14.54□□□□□ -0.08
USP28-209ENST00000540925 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.54□□□□□ -0.08
USP28-209ENST00000540925 DCDC2BA2VCK2 349 aa14.53□□□□□ -0.08
USP28-209ENST00000540925 ANKRD62A6NC57 917 aa14.53□□□□□ -0.08
USP28-209ENST00000540925 K7ERQ8 282 aa14.53□□□□□ -0.08
USP28-209ENST00000540925 MCF2LO15068 1137 aa14.53□□□□□ -0.08
USP28-209ENST00000540925 ALOX15BO15296 676 aa14.53□□□□□ -0.08
USP28-209ENST00000540925 SMAD6O43541 496 aaKnown RBP14.53□□□□□ -0.08
USP28-209ENST00000540925 RNASEH1O60930 286 aaKnown RBP14.53□□□□□ -0.08
USP28-209ENST00000540925 SEMA4FO95754 770 aa14.53□□□□□ -0.08
USP28-209ENST00000540925 ADH1BP00325 375 aa14.53□□□□□ -0.08
USP28-209ENST00000540925 MYBL1P10243 752 aa14.53□□□□□ -0.08
USP28-209ENST00000540925 ENGP17813 658 aa14.53□□□□□ -0.08
USP28-209ENST00000540925 C5AR1P21730 350 aa14.53□□□□□ -0.08
USP28-209ENST00000540925 MAOBP27338 520 aa14.53□□□□□ -0.08
USP28-209ENST00000540925 SLC8A1P32418 973 aa14.53□□□□□ -0.08
USP28-209ENST00000540925 DRD3P35462 400 aa14.53□□□□□ -0.08
USP28-209ENST00000540925 CLCN6P51797 869 aa14.53□□□□□ -0.08
USP28-209ENST00000540925 METAP1P53582 386 aa14.53□□□□□ -0.08
USP28-209ENST00000540925 ARF5P84085 180 aa14.53□□□□□ -0.08
USP28-209ENST00000540925 DCUN1D2Q6PH85 259 aa14.53□□□□□ -0.08
USP28-209ENST00000540925 Q6ZVU0 165 aa14.53□□□□□ -0.08
USP28-209ENST00000540925 OR2A12Q8NGT7 310 aa14.53□□□□□ -0.08
USP28-209ENST00000540925 VOPP1Q96AW1 172 aa14.53□□□□□ -0.08
USP28-209ENST00000540925 TBC1D31Q96DN5 1066 aa14.53□□□□□ -0.08
USP28-209ENST00000540925 NUSAP1Q9BXS6 441 aaKnown RBP14.53□□□□□ -0.08
USP28-209ENST00000540925 NOL6Q9H6R4 1146 aaKnown RBP14.53□□□□□ -0.08
USP28-209ENST00000540925 FBXL12Q9NXK8 326 aa14.53□□□□□ -0.08
USP28-209ENST00000540925 ARHGAP20Q9P2F6 1191 aa14.53□□□□□ -0.08
USP28-209ENST00000540925 CNOT8Q9UFF9 292 aaKnown RBP14.53□□□□□ -0.08
USP28-209ENST00000540925 SARDHQ9UL12 918 aa14.53□□□□□ -0.08
USP28-209ENST00000540925 LUC7L2Q9Y383 392 aaKnown RBP14.53□□□□□ -0.08
USP28-209ENST00000540925 SLCO1B1Q9Y6L6 691 aa14.53□□□□□ -0.08
USP28-209ENST00000540925 CNOT1A5YKK6 2376 aaKnown RBP14.52□□□□□ -0.08
USP28-209ENST00000540925 A0A1W2PP55 124 aa14.52□□□□□ -0.09
USP28-209ENST00000540925 C4orf47A7E2U8 309 aa14.52□□□□□ -0.09
USP28-209ENST00000540925 WASH4PA8MWX3 477 aa14.52□□□□□ -0.09
USP28-209ENST00000540925 IGHV4-34P06331 123 aa14.52□□□□□ -0.09
USP28-209ENST00000540925 CTSLP07711 333 aa14.52□□□□□ -0.09
USP28-209ENST00000540925 GOT1P17174 413 aa14.52□□□□□ -0.09
USP28-209ENST00000540925 CASP14P31944 242 aa14.52□□□□□ -0.09
USP28-209ENST00000540925 ACVRL1P37023 503 aa14.52□□□□□ -0.09
USP28-209ENST00000540925 PSMD8P48556 350 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms