RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 ZNF419Q96HQ0 510 aaPredicted RBP17.3■□□□□ 0.36
CD9-209ENST00000540891 BTBD6Q96KE9 485 aa17.3■□□□□ 0.36
CD9-209ENST00000540891 SNRNP25Q9BV90 132 aaKnown RBP17.3■□□□□ 0.36
CD9-209ENST00000540891 NUP85Q9BW27 656 aa17.3■□□□□ 0.36
CD9-209ENST00000540891 PACSIN1Q9BY11 444 aa17.3■□□□□ 0.36
CD9-209ENST00000540891 ACE2Q9BYF1 805 aaPredicted RBP17.3■□□□□ 0.36
CD9-209ENST00000540891 NOL6Q9H6R4 1146 aaKnown RBP17.3■□□□□ 0.36
CD9-209ENST00000540891 TMEM74BQ9NUR3 256 aa17.3■□□□□ 0.36
CD9-209ENST00000540891 AP4E1Q9UPM8 1137 aa17.3■□□□□ 0.36
CD9-209ENST00000540891 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.3■□□□□ 0.36
CD9-209ENST00000540891 NYNRINQ9P2P1 1898 aaKnown RBP17.29■□□□□ 0.36
CD9-209ENST00000540891 WASH4PA8MWX3 477 aa17.29■□□□□ 0.36
CD9-209ENST00000540891 AKR1B15C9JRZ8 316 aaPredicted RBP17.29■□□□□ 0.36
CD9-209ENST00000540891 SMAD6O43541 496 aaKnown RBP17.29■□□□□ 0.36
CD9-209ENST00000540891 CREB3O43889 395 aa17.29■□□□□ 0.36
CD9-209ENST00000540891 RNF8O76064 485 aa17.29■□□□□ 0.36
CD9-209ENST00000540891 CD160O95971 181 aa17.29■□□□□ 0.36
CD9-209ENST00000540891 DNTTP04053 509 aa17.29■□□□□ 0.36
CD9-209ENST00000540891 TCF4P15884 667 aa17.29■□□□□ 0.36
CD9-209ENST00000540891 ITPKAP23677 461 aa17.29■□□□□ 0.36
CD9-209ENST00000540891 IL1R2P27930 398 aa17.29■□□□□ 0.36
CD9-209ENST00000540891 EPHB2P29323 1055 aa17.29■□□□□ 0.36
CD9-209ENST00000540891 OXTRP30559 389 aa17.29■□□□□ 0.36
CD9-209ENST00000540891 ZNF33AQ06730 810 aa17.29■□□□□ 0.36
CD9-209ENST00000540891 ELAVL3Q14576 367 aaKnown RBP17.29■□□□□ 0.36
CD9-209ENST00000540891 CST6Q15828 149 aa17.29■□□□□ 0.36
CD9-209ENST00000540891 ERMARDQ5T6L9 678 aa17.29■□□□□ 0.36
CD9-209ENST00000540891 LYSMD4Q5XG99 296 aa17.29■□□□□ 0.36
CD9-209ENST00000540891 TCEAL6Q6IPX3 200 aa17.29■□□□□ 0.36
CD9-209ENST00000540891 CYP2U1Q7Z449 544 aa17.29■□□□□ 0.36
CD9-209ENST00000540891 MMAAQ8IVH4 418 aaKnown RBP17.29■□□□□ 0.36
CD9-209ENST00000540891 RTL3Q8N8U3 475 aaKnown RBP17.29■□□□□ 0.36
CD9-209ENST00000540891 ARHGEF2Q92974 986 aaKnown RBP17.29■□□□□ 0.36
CD9-209ENST00000540891 TCEAL3Q969E4 200 aa17.29■□□□□ 0.36
CD9-209ENST00000540891 KCTD15Q96SI1 283 aaPredicted RBP17.29■□□□□ 0.36
CD9-209ENST00000540891 EPAS1Q99814 870 aa17.29■□□□□ 0.36
CD9-209ENST00000540891 SPON2Q9BUD6 331 aa17.29■□□□□ 0.36
CD9-209ENST00000540891 PABPC3Q9H361 631 aaKnown RBP17.29■□□□□ 0.36
CD9-209ENST00000540891 ATP13A1Q9HD20 1204 aa17.29■□□□□ 0.36
CD9-209ENST00000540891 VPS45Q9NRW7 570 aa17.29■□□□□ 0.36
CD9-209ENST00000540891 RXFP3Q9NSD7 469 aa17.29■□□□□ 0.36
CD9-209ENST00000540891 SERGEFQ9UGK8 458 aa17.29■□□□□ 0.36
CD9-209ENST00000540891 ACTL7AQ9Y615 435 aa17.29■□□□□ 0.36
CD9-209ENST00000540891 WDR87Q6ZQQ6 2873 aa17.28■□□□□ 0.36
CD9-209ENST00000540891 ATXN2Q99700 1313 aaKnown RBP17.28■□□□□ 0.36
CD9-209ENST00000540891 CHD5Q8TDI0 1954 aa17.28■□□□□ 0.36
CD9-209ENST00000540891 CBX4O00257 560 aa17.28■□□□□ 0.36
CD9-209ENST00000540891 MID1O15344 667 aa17.28■□□□□ 0.36
CD9-209ENST00000540891 ACSL1P33121 698 aa17.28■□□□□ 0.36
CD9-209ENST00000540891 PCK1P35558 622 aa17.28■□□□□ 0.36
CD9-209ENST00000540891 ZNF75DP51815 510 aa17.28■□□□□ 0.36
CD9-209ENST00000540891 ACCSLQ4AC99 568 aa17.28■□□□□ 0.36
CD9-209ENST00000540891 PEAR1Q5VY43 1037 aaPredicted RBP17.28■□□□□ 0.36
CD9-209ENST00000540891 Q6ZVU0 165 aa17.28■□□□□ 0.36
CD9-209ENST00000540891 FAM124AQ86V42 546 aa17.28■□□□□ 0.36
CD9-209ENST00000540891 CNGA4Q8IV77 575 aa17.28■□□□□ 0.36
CD9-209ENST00000540891 NIPA2Q8N8Q9 360 aa17.28■□□□□ 0.36
CD9-209ENST00000540891 TC2NQ8N9U0 490 aa17.28■□□□□ 0.36
CD9-209ENST00000540891 ATP11CQ8NB49 1132 aa17.28■□□□□ 0.36
CD9-209ENST00000540891 PIGKQ92643 395 aa17.28■□□□□ 0.36
CD9-209ENST00000540891 HSPA12BQ96MM6 686 aa17.28■□□□□ 0.36
CD9-209ENST00000540891 GPR174Q9BXC1 333 aa17.28■□□□□ 0.36
CD9-209ENST00000540891 DHX35Q9H5Z1 703 aaKnown RBP17.28■□□□□ 0.36
CD9-209ENST00000540891 NHEJ1Q9H9Q4 299 aaPredicted RBP17.28■□□□□ 0.36
CD9-209ENST00000540891 ZNHIT6Q9NWK9 470 aaKnown RBP17.28■□□□□ 0.36
CD9-209ENST00000540891 ANAPC7Q9UJX3 599 aa17.28■□□□□ 0.36
CD9-209ENST00000540891 PILRBQ9UKJ0 227 aa17.28■□□□□ 0.36
CD9-209ENST00000540891 NUP205Q92621 2012 aa17.27■□□□□ 0.36
CD9-209ENST00000540891 PATE3B3GLJ2 98 aa17.27■□□□□ 0.36
CD9-209ENST00000540891 PRPSAP2O60256 369 aa17.27■□□□□ 0.36
CD9-209ENST00000540891 GDF9O60383 454 aa17.27■□□□□ 0.36
CD9-209ENST00000540891 RAMP2O60895 175 aa17.27■□□□□ 0.36
CD9-209ENST00000540891 NDUFS2O75306 463 aa17.27■□□□□ 0.36
CD9-209ENST00000540891 ZNF821O75541 412 aaPredicted RBP17.27■□□□□ 0.36
CD9-209ENST00000540891 PSMD8P48556 350 aa17.27■□□□□ 0.36
CD9-209ENST00000540891 CLCN6P51797 869 aa17.27■□□□□ 0.36
CD9-209ENST00000540891 METAP1P53582 386 aa17.27■□□□□ 0.36
CD9-209ENST00000540891 LMNB2Q03252 620 aa17.27■□□□□ 0.36
CD9-209ENST00000540891 PIGHQ14442 188 aaPredicted RBP17.27■□□□□ 0.36
CD9-209ENST00000540891 ACAP1Q15027 740 aa17.27■□□□□ 0.36
CD9-209ENST00000540891 TTC31Q49AM3 519 aaPredicted RBP17.27■□□□□ 0.36
CD9-209ENST00000540891 IL31Q6EBC2 164 aa17.27■□□□□ 0.36
CD9-209ENST00000540891 TXNRD3NBQ6F5E7 133 aa17.27■□□□□ 0.36
CD9-209ENST00000540891 PSTKQ8IV42 348 aaKnown RBP17.27■□□□□ 0.36
CD9-209ENST00000540891 AADATQ8N5Z0 425 aa17.27■□□□□ 0.36
CD9-209ENST00000540891 MRFAP1L1Q96HT8 127 aa17.27■□□□□ 0.36
CD9-209ENST00000540891 MAGEH1Q9H213 219 aa17.27■□□□□ 0.36
CD9-209ENST00000540891 DEF6Q9H4E7 631 aa17.27■□□□□ 0.36
CD9-209ENST00000540891 SPTLC3Q9NUV7 552 aa17.27■□□□□ 0.36
CD9-209ENST00000540891 IP6K2Q9UHH9 426 aa17.27■□□□□ 0.36
CD9-209ENST00000540891 SCML1Q9UN30 329 aa17.27■□□□□ 0.36
CD9-209ENST00000540891 CEP192Q8TEP8 1941 aa17.26■□□□□ 0.35
CD9-209ENST00000540891 A0A1W2PP55 124 aa17.26■□□□□ 0.35
CD9-209ENST00000540891 EIF3CLB5ME19 914 aaKnown RBP17.26■□□□□ 0.35
CD9-209ENST00000540891 MCF2LO15068 1137 aa17.26■□□□□ 0.35
CD9-209ENST00000540891 AKR1B10O60218 316 aa17.26■□□□□ 0.35
CD9-209ENST00000540891 RNASEH1O60930 286 aaKnown RBP17.26■□□□□ 0.35
CD9-209ENST00000540891 SLC8A1P32418 973 aa17.26■□□□□ 0.35
CD9-209ENST00000540891 HTR7P34969 479 aa17.26■□□□□ 0.35
CD9-209ENST00000540891 ETFBP38117 255 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms