RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 TDRD10Q5VZ19 366 aaKnown RBP5.33□□□□□ -1.56
PROM1-220ENST00000540805 BORAQ6PGQ7 559 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 ANGPTL8Q6UXH0 198 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 TAS1R3Q7RTX0 852 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 ZNF467Q7Z7K2 595 aaPredicted RBP5.33□□□□□ -1.56
PROM1-220ENST00000540805 AMIGO2Q86SJ2 522 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 KBTBD6Q86V97 674 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 SDR16C5Q8N3Y7 309 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 ZNF516Q92618 1163 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.33□□□□□ -1.56
PROM1-220ENST00000540805 ATXN7L3BQ96GX2 97 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 FSD1LQ9BXM9 530 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 CEP44Q9C0F1 390 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 TPK1Q9H3S4 243 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 XPNPEP1Q9NQW7 623 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 TBCCD1Q9NVR7 557 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 HACD3Q9P035 362 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 TJP2Q9UDY2 1190 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 ZC3H7BQ9UGR2 993 aaKnown RBP5.33□□□□□ -1.56
PROM1-220ENST00000540805 PCDHGA8Q9Y5G5 932 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 TIMM13Q9Y5L4 95 aaPredicted RBP5.33□□□□□ -1.56
PROM1-220ENST00000540805 PLXNB2O15031 1838 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 C3orf70A6NLC5 250 aaPredicted RBP5.33□□□□□ -1.56
PROM1-220ENST00000540805 CXorf49A8MYA2 514 aaPredicted RBP5.33□□□□□ -1.56
PROM1-220ENST00000540805 H3BRB1 525 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 ADCY6O43306 1168 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 LYPLA1O75608 230 aaPredicted RBP5.33□□□□□ -1.56
PROM1-220ENST00000540805 APOEP02649 317 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 ALDH2P05091 517 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 CKMP06732 381 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 MYL4P12829 197 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 CPA3P15088 417 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 ACAT1P24752 427 aaKnown RBP5.33□□□□□ -1.56
PROM1-220ENST00000540805 HSPA13P48723 471 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 MYBPC1Q00872 1141 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 ROR1Q01973 937 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 APOFQ13790 326 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 KCNJ11Q14654 390 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 EMC2Q15006 297 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 FASTKD1Q53R41 847 aaKnown RBP5.33□□□□□ -1.56
PROM1-220ENST00000540805 XKR5Q6UX68 686 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 PID1Q7Z2X4 250 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 PIAS4Q8N2W9 510 aaPredicted RBP5.33□□□□□ -1.56
PROM1-220ENST00000540805 EFHBQ8N7U6 833 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 NIPA2Q8N8Q9 360 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 FNDC8Q8TC99 324 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 OSBPL10Q9BXB5 764 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 DHX33Q9H6R0 707 aaKnown RBP5.33□□□□□ -1.56
PROM1-220ENST00000540805 DNAJC28Q9NX36 388 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 STAP1Q9ULZ2 295 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 ARHGAP26Q9UNA1 814 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 PCDHGA3Q9Y5H0 932 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 LAMA3Q16787 3333 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.33□□□□□ -1.56
PROM1-220ENST00000540805 UBA6A0AVT1 1052 aaPredicted RBP5.33□□□□□ -1.56
PROM1-220ENST00000540805 APOC4-APOC2K7ER74 178 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 TRDMT1O14717 391 aaKnown RBP5.33□□□□□ -1.56
PROM1-220ENST00000540805 XPO1O14980 1071 aaKnown RBP5.33□□□□□ -1.56
PROM1-220ENST00000540805 CHADO15335 359 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 FAM189A1O60320 539 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 ZMPSTE24O75844 475 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 APOC2P02655 101 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 EDN1P05305 212 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 CD48P09326 243 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 PORP16435 677 aaPredicted RBP5.33□□□□□ -1.56
PROM1-220ENST00000540805 NCF2P19878 526 aaPredicted RBP5.33□□□□□ -1.56
PROM1-220ENST00000540805 KDELR1P24390 212 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 CRHR1P34998 444 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 SLC1A6P48664 564 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 EIF2B2P49770 351 aaKnown RBP5.33□□□□□ -1.56
PROM1-220ENST00000540805 EFNA5P52803 228 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 CDH6P55285 790 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 RPL10AP62906 217 aaKnown RBP5.33□□□□□ -1.56
PROM1-220ENST00000540805 YWHAZP63104 245 aaKnown RBP5.33□□□□□ -1.56
PROM1-220ENST00000540805 PFKPQ01813 784 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 POU5F1BQ06416 359 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 CAMK2BQ13554 666 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 VGLL4Q14135 290 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 ADGRE1Q14246 886 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 CXCL17Q6UXB2 119 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 ZNF410Q86VK4 478 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 SAMD3Q8N6K7 520 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 UBA3Q8TBC4 463 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 ZNF606Q8WXB4 792 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 BSNDQ8WZ55 320 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 TRIM56Q9BRZ2 755 aaKnown RBP5.33□□□□□ -1.56
PROM1-220ENST00000540805 HAUS8Q9BT25 410 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 FRMD8Q9BZ67 464 aaPredicted RBP5.33□□□□□ -1.56
PROM1-220ENST00000540805 SPATC1LQ9H0A9 340 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 APOBEC3GQ9HC16 384 aaKnown RBP5.33□□□□□ -1.56
PROM1-220ENST00000540805 RABL2AQ9UBK7 228 aaPredicted RBP5.33□□□□□ -1.56
PROM1-220ENST00000540805 PADI4Q9UM07 663 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 MCM3APO60318 1980 aa5.32□□□□□ -1.56
PROM1-220ENST00000540805 IGKV6D-21A0A0A0MT36 114 aa5.32□□□□□ -1.56
PROM1-220ENST00000540805 LOC100653049A0A140TA62 436 aa5.32□□□□□ -1.56
PROM1-220ENST00000540805 TCRBV5S1A1TA0A578 114 aa5.32□□□□□ -1.56
PROM1-220ENST00000540805 DFFAO00273 331 aa5.32□□□□□ -1.56
PROM1-220ENST00000540805 ITM2AO43736 263 aa5.32□□□□□ -1.56
PROM1-220ENST00000540805 EXTL3O43909 919 aa5.32□□□□□ -1.56
PROM1-220ENST00000540805 AVILO75366 819 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms