RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 ZNF135P52742 658 aaPredicted RBP13.22□□□□□ -0.29
DNMT1-203ENST00000540357 DGUOKQ16854 277 aa13.22□□□□□ -0.29
DNMT1-203ENST00000540357 ZNF618Q5T7W0 954 aa13.22□□□□□ -0.29
DNMT1-203ENST00000540357 GPR107Q5VW38 600 aa13.22□□□□□ -0.29
DNMT1-203ENST00000540357 TWF2Q6IBS0 349 aaKnown RBP13.22□□□□□ -0.29
DNMT1-203ENST00000540357 OR52E8Q6IFG1 317 aa13.22□□□□□ -0.29
DNMT1-203ENST00000540357 HERC6Q8IVU3 1022 aa13.22□□□□□ -0.29
DNMT1-203ENST00000540357 MICU2Q8IYU8 434 aa13.22□□□□□ -0.29
DNMT1-203ENST00000540357 MYO1HQ8N1T3 1032 aa13.22□□□□□ -0.29
DNMT1-203ENST00000540357 SFRP1Q8N474 314 aa13.22□□□□□ -0.29
DNMT1-203ENST00000540357 SKA2Q8WVK7 121 aaPredicted RBP13.22□□□□□ -0.29
DNMT1-203ENST00000540357 NPAS2Q99743 824 aa13.22□□□□□ -0.29
DNMT1-203ENST00000540357 MYOZ2Q9NPC6 264 aa13.22□□□□□ -0.29
DNMT1-203ENST00000540357 SLC15A5A6NIM6 579 aa13.22□□□□□ -0.29
DNMT1-203ENST00000540357 KCNK1O00180 336 aa13.22□□□□□ -0.29
DNMT1-203ENST00000540357 MAFO75444 373 aaPredicted RBP13.22□□□□□ -0.29
DNMT1-203ENST00000540357 H6PDO95479 791 aa13.22□□□□□ -0.29
DNMT1-203ENST00000540357 JAK1P23458 1154 aa13.22□□□□□ -0.29
DNMT1-203ENST00000540357 MPSTP25325 297 aa13.22□□□□□ -0.29
DNMT1-203ENST00000540357 TKTP29401 623 aaKnown RBP13.22□□□□□ -0.29
DNMT1-203ENST00000540357 TMTC4Q5T4D3 741 aa13.22□□□□□ -0.29
DNMT1-203ENST00000540357 DNAJC1Q96KC8 554 aaKnown RBP13.22□□□□□ -0.29
DNMT1-203ENST00000540357 PPP1R10Q96QC0 940 aaKnown RBP13.22□□□□□ -0.29
DNMT1-203ENST00000540357 NOD1Q9Y239 953 aa13.22□□□□□ -0.29
DNMT1-203ENST00000540357 FAM159BA6NKW6 160 aa13.22□□□□□ -0.29
DNMT1-203ENST00000540357 MATN2O00339 956 aa13.22□□□□□ -0.29
DNMT1-203ENST00000540357 FAM189A1O60320 539 aa13.22□□□□□ -0.29
DNMT1-203ENST00000540357 FAM91A1Q658Y4 838 aa13.22□□□□□ -0.29
DNMT1-203ENST00000540357 MRNIPQ6NTE8 343 aa13.22□□□□□ -0.29
DNMT1-203ENST00000540357 TREML1Q86YW5 311 aa13.22□□□□□ -0.29
DNMT1-203ENST00000540357 HM13Q8TCT9 377 aa13.22□□□□□ -0.29
DNMT1-203ENST00000540357 FIZ1Q96SL8 496 aa13.22□□□□□ -0.29
DNMT1-203ENST00000540357 MYH13Q9UKX3 1938 aa13.22□□□□□ -0.29
DNMT1-203ENST00000540357 MDM4O15151 490 aa13.22□□□□□ -0.29
DNMT1-203ENST00000540357 CST3P01034 146 aaPredicted RBP13.22□□□□□ -0.29
DNMT1-203ENST00000540357 IREB2P48200 963 aaKnown RBP13.22□□□□□ -0.29
DNMT1-203ENST00000540357 TOP3AQ13472 1001 aaPredicted RBP13.22□□□□□ -0.29
DNMT1-203ENST00000540357 ZNF235Q14590 738 aa13.22□□□□□ -0.29
DNMT1-203ENST00000540357 HERC3Q15034 1050 aa13.22□□□□□ -0.29
DNMT1-203ENST00000540357 TIFABQ6ZNK6 161 aa13.22□□□□□ -0.29
DNMT1-203ENST00000540357 PHF21BQ96EK2 531 aa13.22□□□□□ -0.29
DNMT1-203ENST00000540357 RAD21L1Q9H4I0 556 aa13.22□□□□□ -0.29
DNMT1-203ENST00000540357 SATB2Q9UPW6 733 aa13.22□□□□□ -0.29
DNMT1-203ENST00000540357 TNFSF13BQ9Y275 285 aa13.22□□□□□ -0.29
DNMT1-203ENST00000540357 COL6A2P12110 1019 aa13.21□□□□□ -0.29
DNMT1-203ENST00000540357 RAD23AP54725 363 aa13.21□□□□□ -0.29
DNMT1-203ENST00000540357 TNK2Q07912 1038 aa13.21□□□□□ -0.29
DNMT1-203ENST00000540357 PEX6Q13608 980 aa13.21□□□□□ -0.29
DNMT1-203ENST00000540357 PCID2Q5JVF3 399 aa13.21□□□□□ -0.29
DNMT1-203ENST00000540357 NOTUMQ6P988 496 aa13.21□□□□□ -0.29
DNMT1-203ENST00000540357 ZNF781Q8N8C0 355 aa13.21□□□□□ -0.29
DNMT1-203ENST00000540357 CMASQ8NFW8 434 aaPredicted RBP13.21□□□□□ -0.29
DNMT1-203ENST00000540357 TBL1YQ9BQ87 522 aa13.21□□□□□ -0.29
DNMT1-203ENST00000540357 NOL11Q9H8H0 719 aaKnown RBP13.21□□□□□ -0.29
DNMT1-203ENST00000540357 CDHR5Q9HBB8 845 aa13.21□□□□□ -0.29
DNMT1-203ENST00000540357 TBC1D13Q9NVG8 400 aa13.21□□□□□ -0.29
DNMT1-203ENST00000540357 SF3B1O75533 1304 aaKnown RBP eCLIP13.21□□□□□ -0.292e-6■■■■■ 110.9
DNMT1-203ENST00000540357 DHRS12A0PJE2 317 aa13.21□□□□□ -0.29
DNMT1-203ENST00000540357 SPDYE16A6NNV3 312 aaPredicted RBP13.21□□□□□ -0.29
DNMT1-203ENST00000540357 BBIP1A8MTZ0 92 aa13.21□□□□□ -0.29
DNMT1-203ENST00000540357 RNASEH1O60930 286 aaKnown RBP13.21□□□□□ -0.29
DNMT1-203ENST00000540357 NDUFS3O75489 264 aa13.21□□□□□ -0.29
DNMT1-203ENST00000540357 ACO1P21399 889 aaKnown RBP13.21□□□□□ -0.29
DNMT1-203ENST00000540357 PRKCHP24723 683 aa13.21□□□□□ -0.29
DNMT1-203ENST00000540357 RAB10P61026 200 aa13.21□□□□□ -0.29
DNMT1-203ENST00000540357 POU6F1Q14863 301 aa13.21□□□□□ -0.29
DNMT1-203ENST00000540357 ZYG11AQ6WRX3 759 aa13.21□□□□□ -0.29
DNMT1-203ENST00000540357 DEFB106AQ8N104 65 aa13.21□□□□□ -0.29
DNMT1-203ENST00000540357 VPS33AQ96AX1 596 aa13.21□□□□□ -0.29
DNMT1-203ENST00000540357 POPDC2Q9HBU9 364 aa13.21□□□□□ -0.29
DNMT1-203ENST00000540357 SARS2Q9NP81 518 aaKnown RBP13.21□□□□□ -0.29
DNMT1-203ENST00000540357 MKS1Q9NXB0 559 aa13.21□□□□□ -0.29
DNMT1-203ENST00000540357 DDX43Q9NXZ2 648 aaKnown RBP13.21□□□□□ -0.29
DNMT1-203ENST00000540357 UBP1Q9NZI7 540 aa13.21□□□□□ -0.29
DNMT1-203ENST00000540357 RAD54BQ9Y620 910 aa13.21□□□□□ -0.29
DNMT1-203ENST00000540357 B4GALT4O60513 344 aa13.21□□□□□ -0.3
DNMT1-203ENST00000540357 USP12O75317 370 aa13.21□□□□□ -0.3
DNMT1-203ENST00000540357 GSNP06396 782 aa13.21□□□□□ -0.3
DNMT1-203ENST00000540357 ATP6V1B2P21281 511 aa13.21□□□□□ -0.3
DNMT1-203ENST00000540357 MSX2P35548 267 aaPredicted RBP13.21□□□□□ -0.3
DNMT1-203ENST00000540357 TUBP50607 506 aa13.21□□□□□ -0.3
DNMT1-203ENST00000540357 LIMK2P53671 638 aa13.21□□□□□ -0.3
DNMT1-203ENST00000540357 AMHR2Q16671 573 aa13.21□□□□□ -0.3
DNMT1-203ENST00000540357 CCDC81Q6ZN84 652 aa13.21□□□□□ -0.3
DNMT1-203ENST00000540357 UNC93AQ86WB7 457 aa13.21□□□□□ -0.3
DNMT1-203ENST00000540357 OR9Q1Q8NGQ5 310 aa13.21□□□□□ -0.3
DNMT1-203ENST00000540357 CPB2Q96IY4 423 aa13.21□□□□□ -0.3
DNMT1-203ENST00000540357 SEPHS2Q99611 448 aa13.21□□□□□ -0.3
DNMT1-203ENST00000540357 UNC93B1Q9H1C4 597 aa13.21□□□□□ -0.3
DNMT1-203ENST00000540357 CD274Q9NZQ7 290 aa13.21□□□□□ -0.3
DNMT1-203ENST00000540357 PIN4Q9Y237 131 aaKnown RBP13.21□□□□□ -0.3
DNMT1-203ENST00000540357 PCDHAC2Q9Y5I4 1007 aa13.21□□□□□ -0.3
DNMT1-203ENST00000540357 ADGRA2Q96PE1 1338 aa13.21□□□□□ -0.3
DNMT1-203ENST00000540357 ATP6V1G1O75348 118 aa13.21□□□□□ -0.3
DNMT1-203ENST00000540357 C2P06681 752 aa13.21□□□□□ -0.3
DNMT1-203ENST00000540357 ABCG1P45844 678 aa13.21□□□□□ -0.3
DNMT1-203ENST00000540357 RAD51Q06609 339 aa13.21□□□□□ -0.3
DNMT1-203ENST00000540357 PSMD5Q16401 504 aa13.21□□□□□ -0.3
DNMT1-203ENST00000540357 LSM12Q3MHD2 195 aaKnown RBP13.21□□□□□ -0.3
DNMT1-203ENST00000540357 MTX3Q5HYI7 312 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms