RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 TTLL3Q9Y4R7 772 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 RRN3P2A6NIE6 340 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 TGDSO95455 350 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 RARAP10276 462 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 CHRNB2P17787 502 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 PSMA3P25788 255 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 VEPH1Q14D04 833 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 KATNAL2Q8IYT4 538 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 MYO1HQ8N1T3 1032 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 DMRTB1Q96MA1 342 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 GPR20Q99678 358 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 BCL7BQ9BQE9 202 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 ARMC7Q9H6L4 198 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 COPS7BQ9H9Q2 264 aaPredicted RBP6.16□□□□□ -1.42
PTPRD-214ENST00000540109 SLC12A6Q9UHW9 1150 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 ZNF221Q9UK13 617 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 PCDHB4Q9Y5E5 795 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 PTPRFP10586 1907 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 FBP2O00757 339 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 SGPL1O95470 568 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 PDGFRBP09619 1106 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 TFPTP0C1Z6 253 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 ZNF806P0C7X5 589 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 MTM1Q13496 603 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 PKN2Q16513 984 aaKnown RBP6.16□□□□□ -1.42
PTPRD-214ENST00000540109 FXNQ16595 210 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 DCAF4L1Q3SXM0 396 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 SNAP47Q5SQN1 464 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 MROH9Q5TGP6 573 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 ADGRG6Q86SQ4 1221 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 DNAAF5Q86Y56 855 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 CDKL3Q8IVW4 592 aaPredicted RBP6.16□□□□□ -1.42
PTPRD-214ENST00000540109 ZSWIM2Q8NEG5 633 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 EXD1Q8NHP7 514 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 CD101Q93033 1021 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 TAS2R1Q9NYW7 299 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 RNF181Q9P0P0 153 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 MORF4L1Q9UBU8 362 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 MKLN1Q9UL63 735 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 OTOFQ9HC10 1997 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 SOWAHBA6NEL2 793 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 C2CD2LO14523 706 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 FSCN2O14926 492 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 NADKO95544 446 aaPredicted RBP6.16□□□□□ -1.42
PTPRD-214ENST00000540109 UNGP13051 313 aaPredicted RBP6.16□□□□□ -1.42
PTPRD-214ENST00000540109 PRDX6P30041 224 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 GNA15P30679 374 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 CDH5P33151 784 aaPredicted RBP6.16□□□□□ -1.42
PTPRD-214ENST00000540109 ALDH1A3P47895 512 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 CCNG1P51959 295 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 NCOA4Q13772 614 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 CAPSQ13938 189 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 PIGHQ14442 188 aaPredicted RBP6.16□□□□□ -1.42
PTPRD-214ENST00000540109 POLD3Q15054 466 aaPredicted RBP6.16□□□□□ -1.42
PTPRD-214ENST00000540109 ZBTB49Q6ZSB9 765 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 PLEKHM3Q6ZWE6 761 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 RCOR2Q8IZ40 523 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 ELMOD2Q8IZ81 293 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 GPRC5AQ8NFJ5 357 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 TOR1AIP2Q8NFQ8 470 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 PLEKHO2Q8TD55 490 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 CKAP2Q8WWK9 683 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 MAGEB5Q9BZ81 275 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 IL20Q9NYY1 176 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 GTSE1Q9NYZ3 720 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 PHF24Q9UPV7 400 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 CSDE1O75534 798 aaKnown RBP6.15□□□□□ -1.42
PTPRD-214ENST00000540109 GSTT2P0CG29 244 aa6.15□□□□□ -1.42
PTPRD-214ENST00000540109 GSTT2BP0CG30 244 aa6.15□□□□□ -1.42
PTPRD-214ENST00000540109 FGFR3P22607 806 aa6.15□□□□□ -1.42
PTPRD-214ENST00000540109 BDNFP23560 247 aa6.15□□□□□ -1.42
PTPRD-214ENST00000540109 GRK3P35626 688 aa6.15□□□□□ -1.42
PTPRD-214ENST00000540109 STAT5AP42229 794 aa6.15□□□□□ -1.42
PTPRD-214ENST00000540109 KCNJ1P48048 391 aa6.15□□□□□ -1.42
PTPRD-214ENST00000540109 LSM3P62310 102 aaKnown RBP6.15□□□□□ -1.42
PTPRD-214ENST00000540109 GPS1Q13098 491 aa6.15□□□□□ -1.42
PTPRD-214ENST00000540109 NME3Q13232 169 aa6.15□□□□□ -1.42
PTPRD-214ENST00000540109 LINC00299Q6ZSB3 139 aa6.15□□□□□ -1.42
PTPRD-214ENST00000540109 IFNEQ86WN2 208 aa6.15□□□□□ -1.42
PTPRD-214ENST00000540109 ERI1Q8IV48 349 aaKnown RBP6.15□□□□□ -1.42
PTPRD-214ENST00000540109 DEFB107AQ8IZN7 70 aa6.15□□□□□ -1.42
PTPRD-214ENST00000540109 PACRGLQ8N7B6 248 aa6.15□□□□□ -1.42
PTPRD-214ENST00000540109 RNASE11Q8TAA1 199 aaKnown RBP6.15□□□□□ -1.42
PTPRD-214ENST00000540109 SLC20A1Q8WUM9 679 aa6.15□□□□□ -1.42
PTPRD-214ENST00000540109 DDX1Q92499 740 aaKnown RBP6.15□□□□□ -1.42
PTPRD-214ENST00000540109 USP13Q92995 863 aaPredicted RBP6.15□□□□□ -1.42
PTPRD-214ENST00000540109 ACO2Q99798 780 aaKnown RBP6.15□□□□□ -1.42
PTPRD-214ENST00000540109 INO80BQ9C086 356 aaPredicted RBP6.15□□□□□ -1.42
PTPRD-214ENST00000540109 VRTNQ9H8Y1 702 aa6.15□□□□□ -1.42
PTPRD-214ENST00000540109 STARD7Q9NQZ5 370 aa6.15□□□□□ -1.42
PTPRD-214ENST00000540109 SLC8A2Q9UPR5 921 aa6.15□□□□□ -1.42
PTPRD-214ENST00000540109 KIAA1217Q5T5P2 1943 aa6.15□□□□□ -1.42
PTPRD-214ENST00000540109 ZNF236Q9UL36 1845 aa6.15□□□□□ -1.42
PTPRD-214ENST00000540109 H0YJX3 145 aa6.15□□□□□ -1.42
PTPRD-214ENST00000540109 NOS1APO75052 506 aaPredicted RBP6.15□□□□□ -1.42
PTPRD-214ENST00000540109 SRP72O76094 671 aaKnown RBP6.15□□□□□ -1.42
PTPRD-214ENST00000540109 DBTP11182 482 aaKnown RBP6.15□□□□□ -1.42
PTPRD-214ENST00000540109 COMTP21964 271 aa6.15□□□□□ -1.42
PTPRD-214ENST00000540109 ZNF132P52740 706 aa6.15□□□□□ -1.42
PTPRD-214ENST00000540109 OXCT1P55809 520 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms