RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 NOL6Q9H6R4 1146 aaKnown RBP18.74■□□□□ 0.59
SNRPA1-203ENST00000540017 NHEJ1Q9H9Q4 299 aaPredicted RBP18.74■□□□□ 0.59
SNRPA1-203ENST00000540017 FBRSQ9HAH7 460 aa18.74■□□□□ 0.59
SNRPA1-203ENST00000540017 SPTLC3Q9NUV7 552 aa18.74■□□□□ 0.59
SNRPA1-203ENST00000540017 USP18Q9UMW8 372 aa18.74■□□□□ 0.59
SNRPA1-203ENST00000540017 AP4E1Q9UPM8 1137 aa18.74■□□□□ 0.59
SNRPA1-203ENST00000540017 HS3ST2Q9Y278 367 aa18.74■□□□□ 0.59
SNRPA1-203ENST00000540017 ACTL7AQ9Y615 435 aa18.74■□□□□ 0.59
SNRPA1-203ENST00000540017 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.74■□□□□ 0.59
SNRPA1-203ENST00000540017 TNRC6BQ9UPQ9 1833 aaKnown RBP18.74■□□□□ 0.59
SNRPA1-203ENST00000540017 RALGAPA1Q6GYQ0 2036 aa18.73■□□□□ 0.59
SNRPA1-203ENST00000540017 CEP192Q8TEP8 1941 aa18.73■□□□□ 0.59
SNRPA1-203ENST00000540017 CBX4O00257 560 aa18.73■□□□□ 0.59
SNRPA1-203ENST00000540017 SMAD6O43541 496 aaKnown RBP18.73■□□□□ 0.59
SNRPA1-203ENST00000540017 LRP3O75074 770 aa18.73■□□□□ 0.59
SNRPA1-203ENST00000540017 IL1R2P27930 398 aa18.73■□□□□ 0.59
SNRPA1-203ENST00000540017 NNMTP40261 264 aa18.73■□□□□ 0.59
SNRPA1-203ENST00000540017 SF3A2Q15428 464 aaKnown RBP18.73■□□□□ 0.59
SNRPA1-203ENST00000540017 CSRP2Q16527 193 aa18.73■□□□□ 0.59
SNRPA1-203ENST00000540017 TSR1Q2NL82 804 aaKnown RBP18.73■□□□□ 0.59
SNRPA1-203ENST00000540017 ACCSLQ4AC99 568 aa18.73■□□□□ 0.59
SNRPA1-203ENST00000540017 ZNF776Q68DI1 518 aaPredicted RBP18.73■□□□□ 0.59
SNRPA1-203ENST00000540017 Q6ZVU0 165 aa18.73■□□□□ 0.59
SNRPA1-203ENST00000540017 FAM124AQ86V42 546 aa18.73■□□□□ 0.59
SNRPA1-203ENST00000540017 CPNE8Q86YQ8 564 aa18.73■□□□□ 0.59
SNRPA1-203ENST00000540017 CNGA4Q8IV77 575 aa18.73■□□□□ 0.59
SNRPA1-203ENST00000540017 MMAAQ8IVH4 418 aaKnown RBP18.73■□□□□ 0.59
SNRPA1-203ENST00000540017 ARHGEF2Q92974 986 aaKnown RBP18.73■□□□□ 0.59
SNRPA1-203ENST00000540017 KCTD15Q96SI1 283 aaPredicted RBP18.73■□□□□ 0.59
SNRPA1-203ENST00000540017 EPAS1Q99814 870 aa18.73■□□□□ 0.59
SNRPA1-203ENST00000540017 ACE2Q9BYF1 805 aaPredicted RBP18.73■□□□□ 0.59
SNRPA1-203ENST00000540017 DEF6Q9H4E7 631 aa18.73■□□□□ 0.59
SNRPA1-203ENST00000540017 DHX35Q9H5Z1 703 aaKnown RBP18.73■□□□□ 0.59
SNRPA1-203ENST00000540017 RETREG1Q9H6L5 497 aa18.73■□□□□ 0.59
SNRPA1-203ENST00000540017 ATP13A1Q9HD20 1204 aa18.73■□□□□ 0.59
SNRPA1-203ENST00000540017 TMEM74BQ9NUR3 256 aa18.73■□□□□ 0.59
SNRPA1-203ENST00000540017 ANAPC7Q9UJX3 599 aa18.73■□□□□ 0.59
SNRPA1-203ENST00000540017 PCDHGA5Q9Y5G8 931 aa18.73■□□□□ 0.59
SNRPA1-203ENST00000540017 CHD5Q8TDI0 1954 aa18.73■□□□□ 0.59
SNRPA1-203ENST00000540017 NYNRINQ9P2P1 1898 aaKnown RBP18.73■□□□□ 0.59
SNRPA1-203ENST00000540017 NUP205Q92621 2012 aa18.73■□□□□ 0.59
SNRPA1-203ENST00000540017 AKR1B10O60218 316 aa18.72■□□□□ 0.59
SNRPA1-203ENST00000540017 PRPSAP2O60256 369 aa18.72■□□□□ 0.59
SNRPA1-203ENST00000540017 CD160O95971 181 aa18.72■□□□□ 0.59
SNRPA1-203ENST00000540017 ITPKAP23677 461 aa18.72■□□□□ 0.59
SNRPA1-203ENST00000540017 METAP1P53582 386 aa18.72■□□□□ 0.59
SNRPA1-203ENST00000540017 ARF5P84085 180 aa18.72■□□□□ 0.59
SNRPA1-203ENST00000540017 ACAP1Q15027 740 aa18.72■□□□□ 0.59
SNRPA1-203ENST00000540017 TXNRD3NBQ6F5E7 133 aa18.72■□□□□ 0.59
SNRPA1-203ENST00000540017 TCEAL6Q6IPX3 200 aa18.72■□□□□ 0.59
SNRPA1-203ENST00000540017 CYP2U1Q7Z449 544 aa18.72■□□□□ 0.59
SNRPA1-203ENST00000540017 RTL3Q8N8U3 475 aaKnown RBP18.72■□□□□ 0.59
SNRPA1-203ENST00000540017 ATP11CQ8NB49 1132 aa18.72■□□□□ 0.59
SNRPA1-203ENST00000540017 TCEAL3Q969E4 200 aa18.72■□□□□ 0.59
SNRPA1-203ENST00000540017 MRFAP1L1Q96HT8 127 aa18.72■□□□□ 0.59
SNRPA1-203ENST00000540017 GPR174Q9BXC1 333 aa18.72■□□□□ 0.59
SNRPA1-203ENST00000540017 SERGEFQ9UGK8 458 aa18.72■□□□□ 0.59
SNRPA1-203ENST00000540017 WASH4PA8MWX3 477 aa18.71■□□□□ 0.59
SNRPA1-203ENST00000540017 PATE3B3GLJ2 98 aa18.71■□□□□ 0.59
SNRPA1-203ENST00000540017 MID1O15344 667 aa18.71■□□□□ 0.59
SNRPA1-203ENST00000540017 NDUFS2O75306 463 aa18.71■□□□□ 0.59
SNRPA1-203ENST00000540017 ZNF821O75541 412 aaPredicted RBP18.71■□□□□ 0.59
SNRPA1-203ENST00000540017 DNTTP04053 509 aa18.71■□□□□ 0.59
SNRPA1-203ENST00000540017 ZNF806P0C7X5 589 aa18.71■□□□□ 0.59
SNRPA1-203ENST00000540017 ACSL1P33121 698 aa18.71■□□□□ 0.59
SNRPA1-203ENST00000540017 PCK1P35558 622 aa18.71■□□□□ 0.59
SNRPA1-203ENST00000540017 ZBTB16Q05516 673 aa18.71■□□□□ 0.59
SNRPA1-203ENST00000540017 ZNF33AQ06730 810 aa18.71■□□□□ 0.59
SNRPA1-203ENST00000540017 PIGHQ14442 188 aaPredicted RBP18.71■□□□□ 0.59
SNRPA1-203ENST00000540017 CST6Q15828 149 aa18.71■□□□□ 0.59
SNRPA1-203ENST00000540017 KCNT1Q5JUK3 1230 aa18.71■□□□□ 0.59
SNRPA1-203ENST00000540017 SPDYCQ5MJ68 293 aa18.71■□□□□ 0.59
SNRPA1-203ENST00000540017 LYSMD4Q5XG99 296 aa18.71■□□□□ 0.59
SNRPA1-203ENST00000540017 IL31Q6EBC2 164 aa18.71■□□□□ 0.59
SNRPA1-203ENST00000540017 PRR23CQ6ZRP0 262 aa18.71■□□□□ 0.59
SNRPA1-203ENST00000540017 GPR161Q8N6U8 529 aaKnown RBP18.71■□□□□ 0.59
SNRPA1-203ENST00000540017 NIPA2Q8N8Q9 360 aa18.71■□□□□ 0.59
SNRPA1-203ENST00000540017 ZNF564Q8TBZ8 553 aaPredicted RBP18.71■□□□□ 0.59
SNRPA1-203ENST00000540017 PIGKQ92643 395 aa18.71■□□□□ 0.59
SNRPA1-203ENST00000540017 ZNF419Q96HQ0 510 aaPredicted RBP18.71■□□□□ 0.59
SNRPA1-203ENST00000540017 CCDC42Q96M95 316 aa18.71■□□□□ 0.59
SNRPA1-203ENST00000540017 HSPA12BQ96MM6 686 aa18.71■□□□□ 0.59
SNRPA1-203ENST00000540017 KLC2Q9H0B6 622 aa18.71■□□□□ 0.59
SNRPA1-203ENST00000540017 MAGEH1Q9H213 219 aa18.71■□□□□ 0.59
SNRPA1-203ENST00000540017 PABPC3Q9H361 631 aaKnown RBP18.71■□□□□ 0.59
SNRPA1-203ENST00000540017 RXFP3Q9NSD7 469 aa18.71■□□□□ 0.59
SNRPA1-203ENST00000540017 IP6K2Q9UHH9 426 aa18.71■□□□□ 0.59
SNRPA1-203ENST00000540017 SARDHQ9UL12 918 aa18.71■□□□□ 0.59
SNRPA1-203ENST00000540017 NUMA1Q14980 2115 aa18.71■□□□□ 0.59
SNRPA1-203ENST00000540017 ATXN2Q99700 1313 aaKnown RBP18.71■□□□□ 0.59
SNRPA1-203ENST00000540017 RAMP2O60895 175 aa18.7■□□□□ 0.58
SNRPA1-203ENST00000540017 H2AFZP0C0S5 128 aa18.7■□□□□ 0.58
SNRPA1-203ENST00000540017 GOT1P17174 413 aa18.7■□□□□ 0.58
SNRPA1-203ENST00000540017 OXTRP30559 389 aa18.7■□□□□ 0.58
SNRPA1-203ENST00000540017 SLC8A1P32418 973 aa18.7■□□□□ 0.58
SNRPA1-203ENST00000540017 PSMD8P48556 350 aa18.7■□□□□ 0.58
SNRPA1-203ENST00000540017 TPI1P60174 286 aa18.7■□□□□ 0.58
SNRPA1-203ENST00000540017 ELAVL3Q14576 367 aaKnown RBP18.7■□□□□ 0.58
SNRPA1-203ENST00000540017 SMTNL2Q2TAL5 461 aa18.7■□□□□ 0.58
SNRPA1-203ENST00000540017 LEKR1Q6ZMV7 388 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms