RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 OTUD4Q01804 1114 aaKnown RBP12.86□□□□□ -0.35
DDX55-206ENST00000539934 SCRN3Q0VDG4 424 aa12.86□□□□□ -0.35
DDX55-206ENST00000539934 DHX34Q14147 1143 aaKnown RBP12.86□□□□□ -0.35
DDX55-206ENST00000539934 TARBP2Q15633 366 aaKnown RBP12.86□□□□□ -0.35
DDX55-206ENST00000539934 ASRGL1Q7L266 308 aa12.86□□□□□ -0.35
DDX55-206ENST00000539934 SLC44A1Q8WWI5 657 aa12.86□□□□□ -0.35
DDX55-206ENST00000539934 ARNTL2Q8WYA1 636 aa12.86□□□□□ -0.35
DDX55-206ENST00000539934 VWCEQ96DN2 955 aa12.86□□□□□ -0.35
DDX55-206ENST00000539934 C11orf16Q9NQ32 467 aa12.86□□□□□ -0.35
DDX55-206ENST00000539934 PPANQ9NQ55 473 aaKnown RBP12.86□□□□□ -0.35
DDX55-206ENST00000539934 PDGFCQ9NRA1 345 aa12.86□□□□□ -0.35
DDX55-206ENST00000539934 GMEB2Q9UKD1 530 aa12.86□□□□□ -0.35
DDX55-206ENST00000539934 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.85□□□□□ -0.35
DDX55-206ENST00000539934 K7ERI5 159 aa12.85□□□□□ -0.35
DDX55-206ENST00000539934 OCM2P0CE71 109 aa12.85□□□□□ -0.35
DDX55-206ENST00000539934 OCMP0CE72 109 aaPredicted RBP12.85□□□□□ -0.35
DDX55-206ENST00000539934 P4HA1P13674 534 aa12.85□□□□□ -0.35
DDX55-206ENST00000539934 GARTP22102 1010 aa12.85□□□□□ -0.35
DDX55-206ENST00000539934 HADHAP40939 763 aa12.85□□□□□ -0.35
DDX55-206ENST00000539934 AARS2Q5JTZ9 985 aaKnown RBP12.85□□□□□ -0.35
DDX55-206ENST00000539934 VARS2Q5ST30 1063 aaKnown RBP12.85□□□□□ -0.35
DDX55-206ENST00000539934 USP37Q86T82 979 aa12.85□□□□□ -0.35
DDX55-206ENST00000539934 PALM2Q8IXS6 379 aa12.85□□□□□ -0.35
DDX55-206ENST00000539934 GPD1LQ8N335 351 aa12.85□□□□□ -0.35
DDX55-206ENST00000539934 CAVIN3Q969G5 261 aa12.85□□□□□ -0.35
DDX55-206ENST00000539934 ATP6V1G3Q96LB4 118 aa12.85□□□□□ -0.35
DDX55-206ENST00000539934 CMTM3Q96MX0 182 aa12.85□□□□□ -0.35
DDX55-206ENST00000539934 SELENOSQ9BQE4 189 aa12.85□□□□□ -0.35
DDX55-206ENST00000539934 SYTL2Q9HCH5 934 aa12.85□□□□□ -0.35
DDX55-206ENST00000539934 CD320Q9NPF0 282 aa12.85□□□□□ -0.35
DDX55-206ENST00000539934 INTS7Q9NVH2 962 aaKnown RBP12.85□□□□□ -0.35
DDX55-206ENST00000539934 LUZP4Q9P127 313 aa12.85□□□□□ -0.35
DDX55-206ENST00000539934 MTCH2Q9Y6C9 303 aa12.85□□□□□ -0.35
DDX55-206ENST00000539934 A0A087X0T9 212 aa12.85□□□□□ -0.35
DDX55-206ENST00000539934 AXIN1O15169 862 aa12.85□□□□□ -0.35
DDX55-206ENST00000539934 PJA2O43164 708 aa12.85□□□□□ -0.35
DDX55-206ENST00000539934 HEXBP07686 556 aa12.85□□□□□ -0.35
DDX55-206ENST00000539934 FAM228BP0C875 321 aa12.85□□□□□ -0.35
DDX55-206ENST00000539934 DRD4P21917 467 aa12.85□□□□□ -0.35
DDX55-206ENST00000539934 RFX1P22670 979 aa12.85□□□□□ -0.35
DDX55-206ENST00000539934 GSTM2P28161 218 aa12.85□□□□□ -0.35
DDX55-206ENST00000539934 PRKCIP41743 596 aa12.85□□□□□ -0.35
DDX55-206ENST00000539934 FOXK1P85037 733 aa12.85□□□□□ -0.35
DDX55-206ENST00000539934 DRAP1Q14919 205 aaPredicted RBP12.85□□□□□ -0.35
DDX55-206ENST00000539934 ACAP2Q15057 778 aa12.85□□□□□ -0.35
DDX55-206ENST00000539934 ARHGAP44Q17R89 818 aa12.85□□□□□ -0.35
DDX55-206ENST00000539934 PARP6Q2NL67 630 aa12.85□□□□□ -0.35
DDX55-206ENST00000539934 GALNTL6Q49A17 601 aa12.85□□□□□ -0.35
DDX55-206ENST00000539934 VWA5B1Q5TIE3 1220 aa12.85□□□□□ -0.35
DDX55-206ENST00000539934 ERAP2Q6P179 960 aa12.85□□□□□ -0.35
DDX55-206ENST00000539934 PGM2L1Q6PCE3 622 aa12.85□□□□□ -0.35
DDX55-206ENST00000539934 PLPPR4Q7Z2D5 763 aa12.85□□□□□ -0.35
DDX55-206ENST00000539934 ZNF571Q7Z3V5 609 aaPredicted RBP12.85□□□□□ -0.35
DDX55-206ENST00000539934 TMCO2Q7Z6W1 182 aaPredicted RBP12.85□□□□□ -0.35
DDX55-206ENST00000539934 CCDC25Q86WR0 208 aa12.85□□□□□ -0.35
DDX55-206ENST00000539934 ZNF540Q8NDQ6 660 aa12.85□□□□□ -0.35
DDX55-206ENST00000539934 PSD4Q8NDX1 1056 aa12.85□□□□□ -0.35
DDX55-206ENST00000539934 IPMKQ8NFU5 416 aa12.85□□□□□ -0.35
DDX55-206ENST00000539934 ALKBH8Q96BT7 664 aaKnown RBP12.85□□□□□ -0.35
DDX55-206ENST00000539934 KLHL29Q96CT2 875 aa12.85□□□□□ -0.35
DDX55-206ENST00000539934 FAR2Q96K12 515 aa12.85□□□□□ -0.35
DDX55-206ENST00000539934 CLPBQ9H078 707 aa12.85□□□□□ -0.35
DDX55-206ENST00000539934 SIAEQ9HAT2 523 aa12.85□□□□□ -0.35
DDX55-206ENST00000539934 UCKL1Q9NWZ5 548 aa12.85□□□□□ -0.35
DDX55-206ENST00000539934 UBA2Q9UBT2 640 aaPredicted RBP12.85□□□□□ -0.35
DDX55-206ENST00000539934 ZMIZ1Q9ULJ6 1067 aa12.85□□□□□ -0.35
DDX55-206ENST00000539934 OR5K3A6NET4 321 aa12.84□□□□□ -0.35
DDX55-206ENST00000539934 SLC9B1P1A6NJY1 282 aa12.84□□□□□ -0.35
DDX55-206ENST00000539934 A8MUI8 341 aa12.84□□□□□ -0.35
DDX55-206ENST00000539934 CLOCKO15516 846 aa12.84□□□□□ -0.35
DDX55-206ENST00000539934 DYNC1LI2O43237 492 aaPredicted RBP12.84□□□□□ -0.35
DDX55-206ENST00000539934 SIN3BO75182 1162 aa12.84□□□□□ -0.35
DDX55-206ENST00000539934 CAPN1P07384 714 aa12.84□□□□□ -0.35
DDX55-206ENST00000539934 ACAT1P24752 427 aaKnown RBP12.84□□□□□ -0.35
DDX55-206ENST00000539934 L1CAMP32004 1257 aa12.84□□□□□ -0.35
DDX55-206ENST00000539934 ABCG1P45844 678 aa12.84□□□□□ -0.35
DDX55-206ENST00000539934 SLC9A3P48764 834 aa12.84□□□□□ -0.35
DDX55-206ENST00000539934 HADHBP55084 474 aaKnown RBP12.84□□□□□ -0.35
DDX55-206ENST00000539934 SMAD4Q13485 552 aaKnown RBP12.84□□□□□ -0.35
DDX55-206ENST00000539934 TIGD2Q4W5G0 525 aa12.84□□□□□ -0.35
DDX55-206ENST00000539934 TMEM31Q5JXX7 168 aa12.84□□□□□ -0.35
DDX55-206ENST00000539934 C1orf220Q5T0J3 134 aa12.84□□□□□ -0.35
DDX55-206ENST00000539934 MAMDC4Q6UXC1 1216 aa12.84□□□□□ -0.35
DDX55-206ENST00000539934 DCDC5Q6ZRR9 648 aa12.84□□□□□ -0.35
DDX55-206ENST00000539934 GALNT13Q8IUC8 556 aa12.84□□□□□ -0.35
DDX55-206ENST00000539934 LRRC71Q8N4P6 559 aa12.84□□□□□ -0.35
DDX55-206ENST00000539934 C12orf50Q8NA57 414 aaPredicted RBP12.84□□□□□ -0.35
DDX55-206ENST00000539934 NMD3Q96D46 503 aaKnown RBP12.84□□□□□ -0.35
DDX55-206ENST00000539934 RUNDC3BQ96NL0 473 aa12.84□□□□□ -0.35
DDX55-206ENST00000539934 FAM213AQ9BRX8 229 aa12.84□□□□□ -0.35
DDX55-206ENST00000539934 TMEM117Q9H0C3 514 aa12.84□□□□□ -0.35
DDX55-206ENST00000539934 ABHD16BQ9H3Z7 469 aa12.84□□□□□ -0.35
DDX55-206ENST00000539934 TRMT13Q9NUP7 481 aaKnown RBP12.84□□□□□ -0.35
DDX55-206ENST00000539934 ZNF624Q9P2J8 865 aaPredicted RBP12.84□□□□□ -0.35
DDX55-206ENST00000539934 SLC12A6Q9UHW9 1150 aa12.84□□□□□ -0.35
DDX55-206ENST00000539934 DOLKQ9UPQ8 538 aa12.84□□□□□ -0.35
DDX55-206ENST00000539934 MRPL42Q9Y6G3 142 aaKnown RBP12.84□□□□□ -0.35
DDX55-206ENST00000539934 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.84□□□□□ -0.35
DDX55-206ENST00000539934 SCN5AQ14524 2016 aa12.84□□□□□ -0.35
DDX55-206ENST00000539934 TNFRSF10BO14763 440 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms