RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 F5H5T6 163 aa22.9■■□□□ 1.26
HOMER3-204ENST00000539827 CACNG3O60359 315 aa22.9■■□□□ 1.26
HOMER3-204ENST00000539827 NEBLO76041 1014 aa22.9■■□□□ 1.26
HOMER3-204ENST00000539827 LINC00271P0C7V0 271 aa22.9■■□□□ 1.26
HOMER3-204ENST00000539827 IRF1P10914 325 aa22.9■■□□□ 1.26
HOMER3-204ENST00000539827 CCT5P48643 541 aa22.9■■□□□ 1.26
HOMER3-204ENST00000539827 EPHB3P54753 998 aa22.9■■□□□ 1.26
HOMER3-204ENST00000539827 HTRA4P83105 476 aaPredicted RBP22.9■■□□□ 1.26
HOMER3-204ENST00000539827 LRRC6Q86X45 466 aa22.9■■□□□ 1.26
HOMER3-204ENST00000539827 LRRC49Q8IUZ0 686 aa22.9■■□□□ 1.26
HOMER3-204ENST00000539827 DENND1CQ8IV53 801 aa22.9■■□□□ 1.26
HOMER3-204ENST00000539827 TRMT2BQ96GJ1 504 aaKnown RBP22.9■■□□□ 1.26
HOMER3-204ENST00000539827 FCRL5Q96RD9 977 aa22.9■■□□□ 1.26
HOMER3-204ENST00000539827 LRRC40Q9H9A6 602 aa22.9■■□□□ 1.26
HOMER3-204ENST00000539827 ZNF334Q9HCZ1 680 aaPredicted RBP22.9■■□□□ 1.26
HOMER3-204ENST00000539827 PRKAG2Q9UGJ0 569 aa22.9■■□□□ 1.26
HOMER3-204ENST00000539827 FAM47DPA6NHR8 397 aa22.89■■□□□ 1.26
HOMER3-204ENST00000539827 MT-CYBP00156 380 aaPredicted RBP22.89■■□□□ 1.26
HOMER3-204ENST00000539827 TPH1P17752 444 aa22.89■■□□□ 1.26
HOMER3-204ENST00000539827 HARS2P49590 506 aaKnown RBP22.89■■□□□ 1.26
HOMER3-204ENST00000539827 FPGSQ05932 587 aa22.89■■□□□ 1.26
HOMER3-204ENST00000539827 FAM133BQ5BKY9 247 aaKnown RBP22.89■■□□□ 1.26
HOMER3-204ENST00000539827 KLHDC10Q6PID8 442 aa22.89■■□□□ 1.26
HOMER3-204ENST00000539827 KLHL23Q8NBE8 558 aa22.89■■□□□ 1.26
HOMER3-204ENST00000539827 WBP2Q969T9 261 aa22.89■■□□□ 1.26
HOMER3-204ENST00000539827 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.89■■□□□ 1.26
HOMER3-204ENST00000539827 MOCS1Q9NZB8 636 aa22.89■■□□□ 1.26
HOMER3-204ENST00000539827 BFARQ9NZS9 450 aa22.89■■□□□ 1.26
HOMER3-204ENST00000539827 GOLGA8RI6L899 631 aa22.89■■□□□ 1.25
HOMER3-204ENST00000539827 PSMD3O43242 534 aa22.89■■□□□ 1.25
HOMER3-204ENST00000539827 CSPG5O95196 566 aa22.89■■□□□ 1.25
HOMER3-204ENST00000539827 PEX11BO96011 259 aa22.89■■□□□ 1.25
HOMER3-204ENST00000539827 CNPP09543 421 aaKnown RBP22.89■■□□□ 1.25
HOMER3-204ENST00000539827 KRT4P19013 534 aa22.89■■□□□ 1.25
HOMER3-204ENST00000539827 NUMBP49757 651 aa22.89■■□□□ 1.25
HOMER3-204ENST00000539827 SMAD1Q15797 465 aaKnown RBP22.89■■□□□ 1.25
HOMER3-204ENST00000539827 ANO4Q32M45 955 aa22.89■■□□□ 1.25
HOMER3-204ENST00000539827 CERCAMQ5T4B2 595 aa22.89■■□□□ 1.25
HOMER3-204ENST00000539827 ACBD5Q5T8D3 534 aaPredicted RBP22.89■■□□□ 1.25
HOMER3-204ENST00000539827 KLHL5Q96PQ7 755 aa22.89■■□□□ 1.25
HOMER3-204ENST00000539827 SP110Q9HB58 689 aa22.89■■□□□ 1.25
HOMER3-204ENST00000539827 RXFP1Q9HBX9 757 aa22.89■■□□□ 1.25
HOMER3-204ENST00000539827 DONSONQ9NYP3 566 aa22.89■■□□□ 1.25
HOMER3-204ENST00000539827 SAMD15Q9P1V8 674 aa22.89■■□□□ 1.25
HOMER3-204ENST00000539827 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.88■■□□□ 1.25
HOMER3-204ENST00000539827 STC2O76061 302 aa22.88■■□□□ 1.25
HOMER3-204ENST00000539827 FAM107AO95990 144 aa22.88■■□□□ 1.25
HOMER3-204ENST00000539827 MT-ND3P03897 115 aa22.88■■□□□ 1.25
HOMER3-204ENST00000539827 KLKB1P03952 638 aa22.88■■□□□ 1.25
HOMER3-204ENST00000539827 CTSAP10619 480 aa22.88■■□□□ 1.25
HOMER3-204ENST00000539827 OR1E1P30953 314 aa22.88■■□□□ 1.25
HOMER3-204ENST00000539827 SLC11A2P49281 568 aa22.88■■□□□ 1.25
HOMER3-204ENST00000539827 HNRNPH2P55795 449 aaKnown RBP22.88■■□□□ 1.25
HOMER3-204ENST00000539827 CRYMQ14894 314 aa22.88■■□□□ 1.25
HOMER3-204ENST00000539827 POLD3Q15054 466 aaPredicted RBP22.88■■□□□ 1.25
HOMER3-204ENST00000539827 CCNJLQ8IV13 435 aa22.88■■□□□ 1.25
HOMER3-204ENST00000539827 PSMG2Q969U7 264 aa22.88■■□□□ 1.25
HOMER3-204ENST00000539827 PLD4Q96BZ4 506 aa22.88■■□□□ 1.25
HOMER3-204ENST00000539827 CHMP6Q96FZ7 201 aa22.88■■□□□ 1.25
HOMER3-204ENST00000539827 PRPF4O43172 522 aaKnown RBP eCLIP22.87■■□□□ 1.25
HOMER3-204ENST00000539827 ATP9BO43861 1147 aa22.87■■□□□ 1.25
HOMER3-204ENST00000539827 RAMP2O60895 175 aa22.87■■□□□ 1.25
HOMER3-204ENST00000539827 CXCL14O95715 111 aa22.87■■□□□ 1.25
HOMER3-204ENST00000539827 CORO1AP31146 461 aaKnown RBP22.87■■□□□ 1.25
HOMER3-204ENST00000539827 ACVRL1P37023 503 aa22.87■■□□□ 1.25
HOMER3-204ENST00000539827 MTA1Q13330 715 aa22.87■■□□□ 1.25
HOMER3-204ENST00000539827 TMEM240Q5SV17 173 aa22.87■■□□□ 1.25
HOMER3-204ENST00000539827 TTC39BQ5VTQ0 682 aaPredicted RBP22.87■■□□□ 1.25
HOMER3-204ENST00000539827 TMEM150AQ86TG1 271 aa22.87■■□□□ 1.25
HOMER3-204ENST00000539827 IPMKQ8NFU5 416 aa22.87■■□□□ 1.25
HOMER3-204ENST00000539827 PABPC5Q96DU9 382 aaKnown RBP22.87■■□□□ 1.25
HOMER3-204ENST00000539827 SERAC1Q96JX3 654 aa22.87■■□□□ 1.25
HOMER3-204ENST00000539827 PAIP2Q9BPZ3 127 aaKnown RBP22.87■■□□□ 1.25
HOMER3-204ENST00000539827 KLF16Q9BXK1 252 aaPredicted RBP22.87■■□□□ 1.25
HOMER3-204ENST00000539827 TRPC7Q9HCX4 862 aa22.87■■□□□ 1.25
HOMER3-204ENST00000539827 SLC17A6Q9P2U8 582 aa22.87■■□□□ 1.25
HOMER3-204ENST00000539827 SMG5Q9UPR3 1016 aaKnown RBP22.87■■□□□ 1.25
HOMER3-204ENST00000539827 AAR2Q9Y312 384 aaKnown RBP22.87■■□□□ 1.25
HOMER3-204ENST00000539827 TGM5O43548 720 aa22.87■■□□□ 1.25
HOMER3-204ENST00000539827 OAS1P00973 400 aaKnown RBP22.87■■□□□ 1.25
HOMER3-204ENST00000539827 DRD4P21917 467 aa22.87■■□□□ 1.25
HOMER3-204ENST00000539827 GBP2P32456 591 aaPredicted RBP22.87■■□□□ 1.25
HOMER3-204ENST00000539827 RPA3P35244 121 aaPredicted RBP22.87■■□□□ 1.25
HOMER3-204ENST00000539827 QPCTQ16769 361 aa22.87■■□□□ 1.25
HOMER3-204ENST00000539827 NAPEPLDQ6IQ20 393 aa22.87■■□□□ 1.25
HOMER3-204ENST00000539827 KLHDC8BQ8IXV7 354 aa22.87■■□□□ 1.25
HOMER3-204ENST00000539827 FCRL3Q96P31 734 aaPredicted RBP22.87■■□□□ 1.25
HOMER3-204ENST00000539827 ZNF317Q96PQ6 595 aaPredicted RBP22.87■■□□□ 1.25
HOMER3-204ENST00000539827 TBL1YQ9BQ87 522 aa22.87■■□□□ 1.25
HOMER3-204ENST00000539827 NAT9Q9BTE0 207 aa22.87■■□□□ 1.25
HOMER3-204ENST00000539827 FICDQ9BVA6 458 aa22.87■■□□□ 1.25
HOMER3-204ENST00000539827 CCDC134Q9H6E4 229 aa22.87■■□□□ 1.25
HOMER3-204ENST00000539827 NT5MQ9NPB1 228 aa22.87■■□□□ 1.25
HOMER3-204ENST00000539827 SMPD4Q9NXE4 827 aa22.87■■□□□ 1.25
HOMER3-204ENST00000539827 IL1RAPL1Q9NZN1 696 aa22.87■■□□□ 1.25
HOMER3-204ENST00000539827 ZFP37Q9Y6Q3 630 aaPredicted RBP22.87■■□□□ 1.25
HOMER3-204ENST00000539827 RPS6KL1Q9Y6S9 549 aa22.87■■□□□ 1.25
HOMER3-204ENST00000539827 TRIM49D1C9J1S8 452 aa22.86■■□□□ 1.25
HOMER3-204ENST00000539827 TYROBPO43914 113 aa22.86■■□□□ 1.25
HOMER3-204ENST00000539827 ANXA9O76027 345 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms