RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 RASGEF1CQ8N431 466 aa15.78■□□□□ 0.12
DDB1-216ENST00000539739 ATPAF2Q8N5M1 289 aa15.78■□□□□ 0.12
DDB1-216ENST00000539739 DCAF4L2Q8NA75 395 aa15.78■□□□□ 0.12
DDB1-216ENST00000539739 CCDC26Q8TAB7 109 aa15.78■□□□□ 0.12
DDB1-216ENST00000539739 COG1Q8WTW3 980 aa15.78■□□□□ 0.12
DDB1-216ENST00000539739 ACDQ96AP0 544 aa15.78■□□□□ 0.12
DDB1-216ENST00000539739 ALG14Q96F25 216 aa15.78■□□□□ 0.12
DDB1-216ENST00000539739 HMCESQ96FZ2 354 aa15.78■□□□□ 0.12
DDB1-216ENST00000539739 HERPUD2Q9BSE4 406 aa15.78■□□□□ 0.12
DDB1-216ENST00000539739 ACE2Q9BYF1 805 aaPredicted RBP15.78■□□□□ 0.12
DDB1-216ENST00000539739 CIPCQ9C0C6 399 aa15.78■□□□□ 0.12
DDB1-216ENST00000539739 ELOVL2Q9NXB9 296 aa15.78■□□□□ 0.12
DDB1-216ENST00000539739 FAM53CQ9NYF3 392 aa15.78■□□□□ 0.12
DDB1-216ENST00000539739 INTS6Q9UL03 887 aaKnown RBP15.78■□□□□ 0.12
DDB1-216ENST00000539739 TTC7AQ9ULT0 858 aaPredicted RBP15.78■□□□□ 0.12
DDB1-216ENST00000539739 COL4A2P08572 1712 aa15.77■□□□□ 0.12
DDB1-216ENST00000539739 NCOR1O75376 2440 aa15.77■□□□□ 0.12
DDB1-216ENST00000539739 KRBA1A5PL33 1030 aa15.77■□□□□ 0.12
DDB1-216ENST00000539739 CBX4O00257 560 aa15.77■□□□□ 0.12
DDB1-216ENST00000539739 PPP1R12AO14974 1030 aaPredicted RBP15.77■□□□□ 0.12
DDB1-216ENST00000539739 FANCGO15287 622 aa15.77■□□□□ 0.12
DDB1-216ENST00000539739 ASLP04424 464 aa15.77■□□□□ 0.12
DDB1-216ENST00000539739 STARD6P59095 220 aa15.77■□□□□ 0.12
DDB1-216ENST00000539739 SIGLEC14Q08ET2 396 aa15.77■□□□□ 0.12
DDB1-216ENST00000539739 GALNT2Q10471 571 aa15.77■□□□□ 0.12
DDB1-216ENST00000539739 KLF1Q13351 362 aaPredicted RBP15.77■□□□□ 0.12
DDB1-216ENST00000539739 NPNTQ6UXI9 565 aa15.77■□□□□ 0.12
DDB1-216ENST00000539739 ADIPOR2Q86V24 386 aa15.77■□□□□ 0.12
DDB1-216ENST00000539739 NETO2Q8NC67 525 aa15.77■□□□□ 0.12
DDB1-216ENST00000539739 KIF18AQ8NI77 898 aa15.77■□□□□ 0.12
DDB1-216ENST00000539739 ACTRT1Q8TDG2 376 aa15.77■□□□□ 0.12
DDB1-216ENST00000539739 TTC17Q96AE7 1141 aa15.77■□□□□ 0.12
DDB1-216ENST00000539739 HAUS1Q96CS2 278 aa15.77■□□□□ 0.12
DDB1-216ENST00000539739 NELL2Q99435 816 aa15.77■□□□□ 0.12
DDB1-216ENST00000539739 BRD8Q9H0E9 1235 aa15.77■□□□□ 0.12
DDB1-216ENST00000539739 FBRSL1Q9HCM7 1045 aaKnown RBP15.77■□□□□ 0.12
DDB1-216ENST00000539739 ZSCAN5CA6NGD5 496 aaPredicted RBP15.76■□□□□ 0.11
DDB1-216ENST00000539739 PGRMC1O00264 195 aaKnown RBP15.76■□□□□ 0.11
DDB1-216ENST00000539739 KDELR3O43731 214 aa15.76■□□□□ 0.11
DDB1-216ENST00000539739 MAP3K6O95382 1288 aa15.76■□□□□ 0.11
DDB1-216ENST00000539739 ALADP13716 330 aa15.76■□□□□ 0.11
DDB1-216ENST00000539739 CD72P21854 359 aa15.76■□□□□ 0.11
DDB1-216ENST00000539739 GARSP41250 739 aaKnown RBP15.76■□□□□ 0.11
DDB1-216ENST00000539739 PAFAH1B1P43034 410 aa15.76■□□□□ 0.11
DDB1-216ENST00000539739 GEMIN4P57678 1058 aaKnown RBP15.76■□□□□ 0.11
DDB1-216ENST00000539739 MESP2Q0VG99 397 aa15.76■□□□□ 0.11
DDB1-216ENST00000539739 SLC10A2Q12908 348 aaPredicted RBP15.76■□□□□ 0.11
DDB1-216ENST00000539739 FBXO43Q4G163 708 aa15.76■□□□□ 0.11
DDB1-216ENST00000539739 RETSATQ6NUM9 610 aa15.76■□□□□ 0.11
DDB1-216ENST00000539739 ADAT2Q7Z6V5 191 aaKnown RBP15.76■□□□□ 0.11
DDB1-216ENST00000539739 CCNYQ8ND76 341 aa15.76■□□□□ 0.11
DDB1-216ENST00000539739 EDAQ92838 391 aa15.76■□□□□ 0.11
DDB1-216ENST00000539739 SP110Q9HB58 689 aa15.76■□□□□ 0.11
DDB1-216ENST00000539739 SAE1Q9UBE0 346 aaPredicted RBP15.76■□□□□ 0.11
DDB1-216ENST00000539739 RNF14Q9UBS8 474 aa15.76■□□□□ 0.11
DDB1-216ENST00000539739 IPO11Q9UI26 975 aaKnown RBP15.76■□□□□ 0.11
DDB1-216ENST00000539739 VPS51Q9UID3 782 aa15.76■□□□□ 0.11
DDB1-216ENST00000539739 SLC25A13Q9UJS0 675 aa15.76■□□□□ 0.11
DDB1-216ENST00000539739 NDRG2Q9UN36 371 aaKnown RBP15.76■□□□□ 0.11
DDB1-216ENST00000539739 PLA2G4CQ9UP65 541 aa15.76■□□□□ 0.11
DDB1-216ENST00000539739 COL4A3Q01955 1670 aa15.76■□□□□ 0.11
DDB1-216ENST00000539739 CXorf51AA0A1B0GTR3 108 aa15.76■□□□□ 0.11
DDB1-216ENST00000539739 KANSL1LA0AUZ9 987 aa15.76■□□□□ 0.11
DDB1-216ENST00000539739 PRRT4C9JH25 899 aa15.76■□□□□ 0.11
DDB1-216ENST00000539739 STK25O00506 426 aa15.76■□□□□ 0.11
DDB1-216ENST00000539739 ZNF185O15231 689 aa15.76■□□□□ 0.11
DDB1-216ENST00000539739 DLDP09622 509 aaKnown RBP15.76■□□□□ 0.11
DDB1-216ENST00000539739 PECAM1P16284 738 aaPredicted RBP15.76■□□□□ 0.11
DDB1-216ENST00000539739 NUMBP49757 651 aa15.76■□□□□ 0.11
DDB1-216ENST00000539739 ECT2LQ008S8 904 aa15.76■□□□□ 0.11
DDB1-216ENST00000539739 OTUD4Q01804 1114 aaKnown RBP15.76■□□□□ 0.11
DDB1-216ENST00000539739 TMEM215Q68D42 235 aa15.76■□□□□ 0.11
DDB1-216ENST00000539739 FSTL4Q6MZW2 842 aa15.76■□□□□ 0.11
DDB1-216ENST00000539739 TIGD7Q6NT04 549 aaPredicted RBP15.76■□□□□ 0.11
DDB1-216ENST00000539739 TP53INP2Q8IXH6 220 aa15.76■□□□□ 0.11
DDB1-216ENST00000539739 CCDC33Q8N5R6 958 aa15.76■□□□□ 0.11
DDB1-216ENST00000539739 ACTL9Q8TC94 416 aa15.76■□□□□ 0.11
DDB1-216ENST00000539739 NSMCE1Q8WV22 266 aa15.76■□□□□ 0.11
DDB1-216ENST00000539739 HDAC11Q96DB2 347 aa15.76■□□□□ 0.11
DDB1-216ENST00000539739 MS4A14Q96JA4 679 aa15.76■□□□□ 0.11
DDB1-216ENST00000539739 FRMD8P1Q9BZ68 369 aaPredicted RBP15.76■□□□□ 0.11
DDB1-216ENST00000539739 STARD13Q9Y3M8 1113 aa15.76■□□□□ 0.11
DDB1-216ENST00000539739 NUP205Q92621 2012 aa15.75■□□□□ 0.11
DDB1-216ENST00000539739 TCRBV7S2A1N4TA0A589 114 aa15.75■□□□□ 0.11
DDB1-216ENST00000539739 SHISA7A6NL88 538 aa15.75■□□□□ 0.11
DDB1-216ENST00000539739 H7C0C1 242 aa15.75■□□□□ 0.11
DDB1-216ENST00000539739 MCF2LO15068 1137 aa15.75■□□□□ 0.11
DDB1-216ENST00000539739 SNAP91O60641 907 aa15.75■□□□□ 0.11
DDB1-216ENST00000539739 EGFP01133 1207 aa15.75■□□□□ 0.11
DDB1-216ENST00000539739 CCNCP24863 283 aa15.75■□□□□ 0.11
DDB1-216ENST00000539739 NNMTP40261 264 aa15.75■□□□□ 0.11
DDB1-216ENST00000539739 ATP5OP48047 213 aa15.75■□□□□ 0.11
DDB1-216ENST00000539739 ST8SIA6P61647 398 aa15.75■□□□□ 0.11
DDB1-216ENST00000539739 ZNF33AQ06730 810 aa15.75■□□□□ 0.11
DDB1-216ENST00000539739 IL10RBQ08334 325 aa15.75■□□□□ 0.11
DDB1-216ENST00000539739 XRCC4Q13426 336 aa15.75■□□□□ 0.11
DDB1-216ENST00000539739 UBXN2BQ14CS0 331 aa15.75■□□□□ 0.11
DDB1-216ENST00000539739 NOMO1Q15155 1222 aa15.75■□□□□ 0.11
DDB1-216ENST00000539739 DGKKQ5KSL6 1271 aa15.75■□□□□ 0.11
DDB1-216ENST00000539739 CAPZA3Q96KX2 299 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms