RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 ARHGAP1Q07960 439 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 PRKAA1Q13131 559 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 MPP3Q13368 585 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 OLIG2Q13516 323 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 CEACAM7Q14002 265 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 KCTD2Q14681 263 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 RFTN1Q14699 578 aaPredicted RBP9.85□□□□□ -0.83
CDH13-204ENST00000539548 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.85□□□□□ -0.83
CDH13-204ENST00000539548 OTUD1Q5VV17 481 aaPredicted RBP9.85□□□□□ -0.83
CDH13-204ENST00000539548 LIPMQ5VYY2 423 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 ARMC3Q5W041 872 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 C9orf57Q5W0N0 161 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 KCTD11Q693B1 232 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 GADL1Q6ZQY3 521 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 PDZD4Q76G19 769 aaPredicted RBP9.85□□□□□ -0.83
CDH13-204ENST00000539548 LCA5Q86VQ0 697 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 B4GALNT2Q8NHY0 566 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 RNF217Q8TC41 542 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 DLG3Q92796 817 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 NMD3Q96D46 503 aaKnown RBP9.85□□□□□ -0.83
CDH13-204ENST00000539548 ATXN7L3BQ96GX2 97 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 HIC2Q96JB3 615 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 SNX27Q96L92 541 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 ACE2Q9BYF1 805 aaPredicted RBP9.85□□□□□ -0.83
CDH13-204ENST00000539548 MRPS26Q9BYN8 205 aaKnown RBP9.85□□□□□ -0.83
CDH13-204ENST00000539548 DNAI2Q9GZS0 605 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 IL22Q9GZX6 179 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 ZNF696Q9H7X3 374 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 KLHL8Q9P2G9 620 aaPredicted RBP9.85□□□□□ -0.83
CDH13-204ENST00000539548 TUBGCP4Q9UGJ1 667 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 POLR2AP24928 1970 aaKnown RBP9.84□□□□□ -0.83
CDH13-204ENST00000539548 BTBD19C9JJ37 291 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 EEF2KO00418 725 aaKnown RBP9.84□□□□□ -0.83
CDH13-204ENST00000539548 XPO1O14980 1071 aaKnown RBP9.84□□□□□ -0.83
CDH13-204ENST00000539548 STRNO43815 780 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 BCAS2O75934 225 aaPredicted RBP9.84□□□□□ -0.83
CDH13-204ENST00000539548 TNFAIP8O95379 198 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 PIGNO95427 931 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 ASLP04424 464 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 CHRNGP07510 517 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 CYP2C9P11712 490 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 CYP2B6P20813 491 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 ME2P23368 584 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 DNAJB1P25685 340 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 LMO2P25791 158 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 GRIA4P48058 902 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 GTF2A2P52657 109 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 MRPS22P82650 360 aaKnown RBP9.84□□□□□ -0.83
CDH13-204ENST00000539548 MS4A2Q01362 244 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 ITGA7Q13683 1181 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 LAMC2Q13753 1193 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 TTLL12Q14166 644 aaPredicted RBP9.84□□□□□ -0.83
CDH13-204ENST00000539548 ANO4Q32M45 955 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 USP41Q3LFD5 358 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 LRRC23Q53EV4 343 aaPredicted RBP9.84□□□□□ -0.83
CDH13-204ENST00000539548 DCAF6Q58WW2 860 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 PPM1LQ5SGD2 360 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 B3GNT6Q6ZMB0 384 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 RBM44Q6ZP01 1051 aaKnown RBP9.84□□□□□ -0.83
CDH13-204ENST00000539548 KCNMB4Q86W47 210 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 ALDH16A1Q8IZ83 802 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 C18orf25Q96B23 403 aaPredicted RBP9.84□□□□□ -0.83
CDH13-204ENST00000539548 MPP4Q96JB8 637 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 VPS39Q96JC1 886 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 PGLYRP2Q96PD5 576 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 C1QTNF1Q9BXJ1 281 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 EFCAB1Q9HAE3 211 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 TMPRSS4Q9NRS4 437 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 SETD4Q9NVD3 440 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 SNTG2Q9NY99 539 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 PACSIN3Q9UKS6 424 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 CNOT11Q9UKZ1 510 aaKnown RBP9.84□□□□□ -0.83
CDH13-204ENST00000539548 TMCO1Q9UM00 188 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 AP4B1Q9Y6B7 739 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 TSC2P49815 1807 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 PRSS51A0A1B0GVH4 220 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 KCNK1O00180 336 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 NEMP1O14524 444 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 NCAM2O15394 837 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 USP12O75317 370 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 TADA2AO75478 443 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 SBK3P0C264 359 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 EPHA3P29320 983 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 PITX1P78337 314 aaPredicted RBP9.84□□□□□ -0.83
CDH13-204ENST00000539548 TMEM259Q4ZIN3 620 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 ARL13AQ5H913 290 aaPredicted RBP9.84□□□□□ -0.83
CDH13-204ENST00000539548 ALKAL1Q6UXT8 129 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 ZNF410Q86VK4 478 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 TP53INP2Q8IXH6 220 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 LILRA2Q8N149 483 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 CNTD1Q8N815 330 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 DNAAF3Q8N9W5 541 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 ACVR1CQ8NER5 493 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 FAM81AQ8TBF8 368 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 AGR3Q8TD06 166 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 TRPM4Q8TD43 1214 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 SLC2A14Q8TDB8 520 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 DDI1Q8WTU0 396 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 STYXQ8WUJ0 223 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 CNKSR2Q8WXI2 1034 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms