RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 MAFKO60675 156 aa18.26■□□□□ 0.51
GNE-204ENST00000539208 CABYRO75952 493 aa18.26■□□□□ 0.51
GNE-204ENST00000539208 ANXA9O76027 345 aa18.26■□□□□ 0.51
GNE-204ENST00000539208 SERPINA6P08185 405 aa18.26■□□□□ 0.51
GNE-204ENST00000539208 KITP10721 976 aa18.26■□□□□ 0.51
GNE-204ENST00000539208 KCNA4P22459 653 aa18.26■□□□□ 0.51
GNE-204ENST00000539208 AFMIDQ63HM1 303 aa18.26■□□□□ 0.51
GNE-204ENST00000539208 PDPK2PQ6A1A2 396 aa18.26■□□□□ 0.51
GNE-204ENST00000539208 LRRC49Q8IUZ0 686 aa18.26■□□□□ 0.51
GNE-204ENST00000539208 C10orf107Q8IVU9 208 aa18.26■□□□□ 0.51
GNE-204ENST00000539208 CASP10Q92851 521 aa18.26■□□□□ 0.51
GNE-204ENST00000539208 FCRL2Q96LA5 508 aaPredicted RBP18.26■□□□□ 0.51
GNE-204ENST00000539208 DENND2DQ9H6A0 471 aaPredicted RBP18.26■□□□□ 0.51
GNE-204ENST00000539208 C20orf96Q9NUD7 363 aaPredicted RBP18.26■□□□□ 0.51
GNE-204ENST00000539208 TRMT13Q9NUP7 481 aaKnown RBP18.26■□□□□ 0.51
GNE-204ENST00000539208 FNIP2Q9P278 1114 aa18.26■□□□□ 0.51
GNE-204ENST00000539208 PPARGC1AQ9UBK2 798 aaKnown RBP18.26■□□□□ 0.51
GNE-204ENST00000539208 MARCOQ9UEW3 520 aaPredicted RBP18.26■□□□□ 0.51
GNE-204ENST00000539208 PCNTO95613 3336 aa18.26■□□□□ 0.51
GNE-204ENST00000539208 NUP205Q92621 2012 aa18.26■□□□□ 0.51
GNE-204ENST00000539208 KCNU1A8MYU2 1149 aa18.25■□□□□ 0.51
GNE-204ENST00000539208 TMEM189-UBE2V1I3L0A0 370 aa18.25■□□□□ 0.51
GNE-204ENST00000539208 DFFAO00273 331 aa18.25■□□□□ 0.51
GNE-204ENST00000539208 ITM2AO43736 263 aa18.25■□□□□ 0.51
GNE-204ENST00000539208 OAZ2O95190 189 aa18.25■□□□□ 0.51
GNE-204ENST00000539208 GM2AP17900 193 aa18.25■□□□□ 0.51
GNE-204ENST00000539208 IBSPP21815 317 aaPredicted RBP18.25■□□□□ 0.51
GNE-204ENST00000539208 DSC1Q08554 894 aa18.25■□□□□ 0.51
GNE-204ENST00000539208 MPP3Q13368 585 aa18.25■□□□□ 0.51
GNE-204ENST00000539208 ACCSLQ4AC99 568 aa18.25■□□□□ 0.51
GNE-204ENST00000539208 RINLQ6ZS11 566 aa18.25■□□□□ 0.51
GNE-204ENST00000539208 OTOP3Q7RTS5 596 aa18.25■□□□□ 0.51
GNE-204ENST00000539208 ZNF778Q96MU6 729 aa18.25■□□□□ 0.51
GNE-204ENST00000539208 APOL2Q9BQE5 337 aa18.25■□□□□ 0.51
GNE-204ENST00000539208 CCDC106Q9BWC9 280 aa18.25■□□□□ 0.51
GNE-204ENST00000539208 GLOD4Q9HC38 313 aa18.25■□□□□ 0.51
GNE-204ENST00000539208 SHROOM3Q8TF72 1996 aa18.25■□□□□ 0.51
GNE-204ENST00000539208 FNDC1Q4ZHG4 1894 aaPredicted RBP18.25■□□□□ 0.51
GNE-204ENST00000539208 VGLL3A8MV65 326 aa18.25■□□□□ 0.51
GNE-204ENST00000539208 F8W810 466 aa18.25■□□□□ 0.51
GNE-204ENST00000539208 LMNAP02545 664 aaKnown RBP18.25■□□□□ 0.51
GNE-204ENST00000539208 CPA3P15088 417 aa18.25■□□□□ 0.51
GNE-204ENST00000539208 HARS2P49590 506 aaKnown RBP18.25■□□□□ 0.51
GNE-204ENST00000539208 CSRP3P50461 194 aa18.25■□□□□ 0.51
GNE-204ENST00000539208 PCID2Q5JVF3 399 aa18.25■□□□□ 0.51
GNE-204ENST00000539208 GLB1LQ6UWU2 654 aa18.25■□□□□ 0.51
GNE-204ENST00000539208 ARHGAP36Q6ZRI8 547 aa18.25■□□□□ 0.51
GNE-204ENST00000539208 CMC1Q7Z7K0 106 aa18.25■□□□□ 0.51
GNE-204ENST00000539208 C1orf74Q96LT6 269 aa18.25■□□□□ 0.51
GNE-204ENST00000539208 SLC39A8Q9C0K1 460 aa18.25■□□□□ 0.51
GNE-204ENST00000539208 ZCWPW1Q9H0M4 648 aa18.25■□□□□ 0.51
GNE-204ENST00000539208 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.25■□□□□ 0.51
GNE-204ENST00000539208 UBP1Q9NZI7 540 aa18.25■□□□□ 0.51
GNE-204ENST00000539208 ARMCX1Q9P291 453 aa18.25■□□□□ 0.51
GNE-204ENST00000539208 SFMBT1Q9UHJ3 866 aa18.25■□□□□ 0.51
GNE-204ENST00000539208 DNAJC16Q9Y2G8 782 aa18.25■□□□□ 0.51
GNE-204ENST00000539208 CASP8AP2Q9UKL3 1982 aa18.25■□□□□ 0.51
GNE-204ENST00000539208 WASH4PA8MWX3 477 aa18.24■□□□□ 0.51
GNE-204ENST00000539208 MYCNP04198 464 aaPredicted RBP18.24■□□□□ 0.51
GNE-204ENST00000539208 RALBP11234 206 aa18.24■□□□□ 0.51
GNE-204ENST00000539208 PRKAR2AP13861 404 aaKnown RBP18.24■□□□□ 0.51
GNE-204ENST00000539208 TPH1P17752 444 aa18.24■□□□□ 0.51
GNE-204ENST00000539208 NMBRP28336 390 aa18.24■□□□□ 0.51
GNE-204ENST00000539208 PGFP49763 221 aa18.24■□□□□ 0.51
GNE-204ENST00000539208 TIGD7Q6NT04 549 aaPredicted RBP18.24■□□□□ 0.51
GNE-204ENST00000539208 TLDC1Q6P9B6 456 aa18.24■□□□□ 0.51
GNE-204ENST00000539208 TREML1Q86YW5 311 aa18.24■□□□□ 0.51
GNE-204ENST00000539208 DCP1BQ8IZD4 617 aaKnown RBP18.24■□□□□ 0.51
GNE-204ENST00000539208 URGCPQ8TCY9 931 aa18.24■□□□□ 0.51
GNE-204ENST00000539208 PPP4R1Q8TF05 950 aa18.24■□□□□ 0.51
GNE-204ENST00000539208 SERPINB11Q96P15 392 aa18.24■□□□□ 0.51
GNE-204ENST00000539208 TBL1YQ9BQ87 522 aa18.24■□□□□ 0.51
GNE-204ENST00000539208 A0A096LPK6 155 aa18.24■□□□□ 0.51
GNE-204ENST00000539208 LYPLA1O75608 230 aaPredicted RBP18.24■□□□□ 0.51
GNE-204ENST00000539208 ALOX15P16050 662 aaPredicted RBP18.24■□□□□ 0.51
GNE-204ENST00000539208 ABCE1P61221 599 aaKnown RBP18.24■□□□□ 0.51
GNE-204ENST00000539208 FAM189BP81408 668 aa18.24■□□□□ 0.51
GNE-204ENST00000539208 TUBB3Q13509 450 aa18.24■□□□□ 0.51
GNE-204ENST00000539208 SMAD1Q15797 465 aaKnown RBP18.24■□□□□ 0.51
GNE-204ENST00000539208 PKN3Q6P5Z2 889 aa18.24■□□□□ 0.51
GNE-204ENST00000539208 SLC24A5Q71RS6 500 aa18.24■□□□□ 0.51
GNE-204ENST00000539208 RTN4RL1Q86UN2 441 aaPredicted RBP18.24■□□□□ 0.51
GNE-204ENST00000539208 MON1AQ86VX9 555 aa18.24■□□□□ 0.51
GNE-204ENST00000539208 TMPRSS6Q8IU80 811 aa18.24■□□□□ 0.51
GNE-204ENST00000539208 TEX9Q8N6V9 391 aa18.24■□□□□ 0.51
GNE-204ENST00000539208 PTCD2Q8WV60 388 aaKnown RBP18.24■□□□□ 0.51
GNE-204ENST00000539208 AZIN2Q96A70 460 aa18.24■□□□□ 0.51
GNE-204ENST00000539208 FUBP3Q96I24 572 aaKnown RBP eCLIP18.24■□□□□ 0.51
GNE-204ENST00000539208 RILPQ96NA2 401 aa18.24■□□□□ 0.51
GNE-204ENST00000539208 ANKRD27Q96NW4 1050 aa18.24■□□□□ 0.51
GNE-204ENST00000539208 NUDCD1Q96RS6 583 aa18.24■□□□□ 0.51
GNE-204ENST00000539208 ZIC5Q96T25 663 aa18.24■□□□□ 0.51
GNE-204ENST00000539208 SORT1Q99523 831 aa18.24■□□□□ 0.51
GNE-204ENST00000539208 NMUR1Q9HB89 426 aa18.24■□□□□ 0.51
GNE-204ENST00000539208 IARS2Q9NSE4 1012 aaKnown RBP18.24■□□□□ 0.51
GNE-204ENST00000539208 TAGLN3Q9UI15 199 aa18.24■□□□□ 0.51
GNE-204ENST00000539208 SCML2Q9UQR0 700 aa18.24■□□□□ 0.51
GNE-204ENST00000539208 FRMPD3Q5JV73 1810 aa18.23■□□□□ 0.51
GNE-204ENST00000539208 TMEM88BA6NKF7 163 aa18.23■□□□□ 0.51
GNE-204ENST00000539208 MSI1O43347 362 aaKnown RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms