RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 NCAM2O15394 837 aa14.85□□□□□ -0.03
CDCA3-207ENST00000538862 CREB3O43889 395 aa14.85□□□□□ -0.03
CDCA3-207ENST00000538862 FKBP6O75344 327 aa14.85□□□□□ -0.03
CDCA3-207ENST00000538862 PDHA1P08559 390 aa14.85□□□□□ -0.03
CDCA3-207ENST00000538862 LINGO3P0C6S8 592 aa14.85□□□□□ -0.03
CDCA3-207ENST00000538862 AP2B1P63010 937 aa14.85□□□□□ -0.03
CDCA3-207ENST00000538862 MXRA7P84157 204 aa14.85□□□□□ -0.03
CDCA3-207ENST00000538862 DEUP1Q05D60 604 aa14.85□□□□□ -0.03
CDCA3-207ENST00000538862 TMEM240Q5SV17 173 aa14.85□□□□□ -0.03
CDCA3-207ENST00000538862 TMCO4Q5TGY1 634 aa14.85□□□□□ -0.03
CDCA3-207ENST00000538862 NDRG1Q92597 394 aaKnown RBP14.85□□□□□ -0.03
CDCA3-207ENST00000538862 NTAN1Q96AB6 310 aa14.85□□□□□ -0.03
CDCA3-207ENST00000538862 BRD8Q9H0E9 1235 aa14.85□□□□□ -0.03
CDCA3-207ENST00000538862 VCXQ9H320 206 aa14.85□□□□□ -0.03
CDCA3-207ENST00000538862 LRRC4Q9HBW1 653 aa14.85□□□□□ -0.03
CDCA3-207ENST00000538862 RNF19AQ9NV58 838 aa14.85□□□□□ -0.03
CDCA3-207ENST00000538862 TMEM216Q9P0N5 145 aa14.85□□□□□ -0.03
CDCA3-207ENST00000538862 TSC2P49815 1807 aa14.84□□□□□ -0.03
CDCA3-207ENST00000538862 C17orf102A2RUQ5 167 aa14.84□□□□□ -0.03
CDCA3-207ENST00000538862 DPPA5A6NC42 116 aa14.84□□□□□ -0.03
CDCA3-207ENST00000538862 ERI2A8K979 691 aaKnown RBP14.84□□□□□ -0.03
CDCA3-207ENST00000538862 TREHO43280 583 aa14.84□□□□□ -0.03
CDCA3-207ENST00000538862 NEBLO76041 1014 aa14.84□□□□□ -0.03
CDCA3-207ENST00000538862 ERVK-10P10266 1014 aa14.84□□□□□ -0.03
CDCA3-207ENST00000538862 RALBP11234 206 aa14.84□□□□□ -0.03
CDCA3-207ENST00000538862 ANPEPP15144 967 aa14.84□□□□□ -0.03
CDCA3-207ENST00000538862 SPRP35270 261 aaPredicted RBP14.84□□□□□ -0.03
CDCA3-207ENST00000538862 MLH1P40692 756 aa14.84□□□□□ -0.03
CDCA3-207ENST00000538862 HCAR3P49019 387 aa14.84□□□□□ -0.03
CDCA3-207ENST00000538862 IDH3AP50213 366 aa14.84□□□□□ -0.03
CDCA3-207ENST00000538862 SERPINB8P50452 374 aa14.84□□□□□ -0.03
CDCA3-207ENST00000538862 LILRA4P59901 499 aa14.84□□□□□ -0.03
CDCA3-207ENST00000538862 ABCE1P61221 599 aaKnown RBP14.84□□□□□ -0.03
CDCA3-207ENST00000538862 BSPRYQ5W0U4 402 aa14.84□□□□□ -0.03
CDCA3-207ENST00000538862 AAGABQ6PD74 315 aa14.84□□□□□ -0.03
CDCA3-207ENST00000538862 TMEM135Q86UB9 458 aa14.84□□□□□ -0.03
CDCA3-207ENST00000538862 OSTM1Q86WC4 334 aa14.84□□□□□ -0.03
CDCA3-207ENST00000538862 OR6Y1Q8NGX8 325 aa14.84□□□□□ -0.03
CDCA3-207ENST00000538862 ZNF184Q99676 751 aaPredicted RBP14.84□□□□□ -0.03
CDCA3-207ENST00000538862 RBBP8Q99708 897 aa14.84□□□□□ -0.03
CDCA3-207ENST00000538862 IL23AQ9NPF7 189 aa14.84□□□□□ -0.03
CDCA3-207ENST00000538862 KRT82Q9NSB4 513 aa14.84□□□□□ -0.03
CDCA3-207ENST00000538862 PIH1D1Q9NWS0 290 aaKnown RBP14.84□□□□□ -0.03
CDCA3-207ENST00000538862 KLK14Q9P0G3 267 aa14.84□□□□□ -0.03
CDCA3-207ENST00000538862 A0A088AWK7 358 aa14.84□□□□□ -0.03
CDCA3-207ENST00000538862 ZNF195O14628 629 aa14.84□□□□□ -0.03
CDCA3-207ENST00000538862 SIN3BO75182 1162 aa14.84□□□□□ -0.03
CDCA3-207ENST00000538862 USP1O94782 785 aa14.84□□□□□ -0.03
CDCA3-207ENST00000538862 FBXO21O94952 628 aa14.84□□□□□ -0.03
CDCA3-207ENST00000538862 AP2A1O95782 977 aa14.84□□□□□ -0.03
CDCA3-207ENST00000538862 MPOP05164 745 aa14.84□□□□□ -0.03
CDCA3-207ENST00000538862 CPA3P15088 417 aa14.84□□□□□ -0.03
CDCA3-207ENST00000538862 PTPN1P18031 435 aaKnown RBP14.84□□□□□ -0.03
CDCA3-207ENST00000538862 ADRA1BP35368 520 aa14.84□□□□□ -0.03
CDCA3-207ENST00000538862 LIMK2P53671 638 aa14.84□□□□□ -0.03
CDCA3-207ENST00000538862 PITX1P78337 314 aaPredicted RBP14.84□□□□□ -0.03
CDCA3-207ENST00000538862 SOX4Q06945 474 aaPredicted RBP14.84□□□□□ -0.03
CDCA3-207ENST00000538862 SCAPQ12770 1279 aa14.84□□□□□ -0.03
CDCA3-207ENST00000538862 PPM1JQ5JR12 505 aa14.84□□□□□ -0.03
CDCA3-207ENST00000538862 C1orf146Q5VVC0 180 aa14.84□□□□□ -0.03
CDCA3-207ENST00000538862 FAM109BQ6ICB4 259 aaPredicted RBP14.84□□□□□ -0.03
CDCA3-207ENST00000538862 OTOP2Q7RTS6 562 aa14.84□□□□□ -0.03
CDCA3-207ENST00000538862 ADGRG6Q86SQ4 1221 aa14.84□□□□□ -0.03
CDCA3-207ENST00000538862 SIX6OS1Q8N1H7 587 aa14.84□□□□□ -0.03
CDCA3-207ENST00000538862 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.84□□□□□ -0.03
CDCA3-207ENST00000538862 FCRL3Q96P31 734 aaPredicted RBP14.84□□□□□ -0.03
CDCA3-207ENST00000538862 CEP41Q9BYV8 373 aa14.84□□□□□ -0.03
CDCA3-207ENST00000538862 TMPRSS4Q9NRS4 437 aa14.84□□□□□ -0.03
CDCA3-207ENST00000538862 SNX15Q9NRS6 342 aa14.84□□□□□ -0.03
CDCA3-207ENST00000538862 BFARQ9NZS9 450 aa14.84□□□□□ -0.03
CDCA3-207ENST00000538862 KLHL8Q9P2G9 620 aaPredicted RBP14.84□□□□□ -0.03
CDCA3-207ENST00000538862 PIN4Q9Y237 131 aaKnown RBP14.84□□□□□ -0.03
CDCA3-207ENST00000538862 MAGEB16A2A368 324 aa14.83□□□□□ -0.04
CDCA3-207ENST00000538862 MTSS1O43312 755 aa14.83□□□□□ -0.04
CDCA3-207ENST00000538862 SKAP2O75563 359 aaPredicted RBP14.83□□□□□ -0.04
CDCA3-207ENST00000538862 PTPN3P26045 913 aa14.83□□□□□ -0.04
CDCA3-207ENST00000538862 COPAP53621 1224 aa14.83□□□□□ -0.04
CDCA3-207ENST00000538862 NME3Q13232 169 aa14.83□□□□□ -0.04
CDCA3-207ENST00000538862 BFSP2Q13515 415 aa14.83□□□□□ -0.04
CDCA3-207ENST00000538862 INTS6LQ5JSJ4 861 aaKnown RBP14.83□□□□□ -0.04
CDCA3-207ENST00000538862 UBXN11Q5T124 520 aa14.83□□□□□ -0.04
CDCA3-207ENST00000538862 SYPL2Q5VXT5 272 aa14.83□□□□□ -0.04
CDCA3-207ENST00000538862 TMEM154Q6P9G4 183 aa14.83□□□□□ -0.04
CDCA3-207ENST00000538862 PAQR9Q6ZVX9 377 aa14.83□□□□□ -0.04
CDCA3-207ENST00000538862 MAVSQ7Z434 540 aa14.83□□□□□ -0.04
CDCA3-207ENST00000538862 OR52K1Q8NGK4 314 aa14.83□□□□□ -0.04
CDCA3-207ENST00000538862 CLPTM1LQ96KA5 538 aa14.83□□□□□ -0.04
CDCA3-207ENST00000538862 CASS4Q9NQ75 786 aa14.83□□□□□ -0.04
CDCA3-207ENST00000538862 PIGVQ9NUD9 493 aa14.83□□□□□ -0.04
CDCA3-207ENST00000538862 PNPOQ9NVS9 261 aa14.83□□□□□ -0.04
CDCA3-207ENST00000538862 DDX43Q9NXZ2 648 aaKnown RBP14.83□□□□□ -0.04
CDCA3-207ENST00000538862 CXXC1Q9P0U4 656 aaPredicted RBP14.83□□□□□ -0.04
CDCA3-207ENST00000538862 VANGL2Q9ULK5 521 aa14.83□□□□□ -0.04
CDCA3-207ENST00000538862 PCDHB12Q9Y5F1 795 aa14.83□□□□□ -0.04
CDCA3-207ENST00000538862 WASF2Q9Y6W5 498 aa14.83□□□□□ -0.04
CDCA3-207ENST00000538862 SYNJ2BP-COX16A0A087WUM0 186 aa14.82□□□□□ -0.04
CDCA3-207ENST00000538862 C9IYK1 514 aa14.82□□□□□ -0.04
CDCA3-207ENST00000538862 PITPNM1O00562 1244 aa14.82□□□□□ -0.04
CDCA3-207ENST00000538862 CCNT2O60583 730 aaKnown RBP14.82□□□□□ -0.04
CDCA3-207ENST00000538862 BEST1O76090 585 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms