RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 ING5Q8WYH8 240 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 TFAP2BQ92481 460 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.67□□□□□ -1.82
PTPN22-211ENST00000538253 GDAP1L1Q96MZ0 367 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 TWNKQ96RR1 684 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 TBC1D17Q9HA65 648 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 SGK2Q9HBY8 427 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 CHORDC1Q9UHD1 332 aaPredicted RBP3.67□□□□□ -1.82
PTPN22-211ENST00000538253 TRHDEQ9UKU6 1024 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 PCDHGA2Q9Y5H1 932 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 PCDHA13Q9Y5I0 950 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 TMEM191CA6NGB0 347 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 CES2O00748 559 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 APOL1O14791 398 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 MCF2LO15068 1137 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 MEFVO15553 781 aaPredicted RBP3.66□□□□□ -1.82
PTPN22-211ENST00000538253 TEX33O43247 280 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 NDUFB5O43674 189 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 OPA1O60313 960 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 NDUFS2O75306 463 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 KIAA0754O94854 1291 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 ARHGEF15O94989 841 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 KAT7O95251 611 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 IGLV3-27P01718 113 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 DNTTP04053 509 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 GYPCP04921 128 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 DLDP09622 509 aaKnown RBP3.66□□□□□ -1.82
PTPN22-211ENST00000538253 IRF1P10914 325 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 CDK4P11802 303 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 KELP23276 732 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 CTHP32929 405 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 RFC1P35251 1148 aaPredicted RBP3.66□□□□□ -1.82
PTPN22-211ENST00000538253 GALCP54803 685 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 RNASE9P60153 205 aaKnown RBP3.66□□□□□ -1.82
PTPN22-211ENST00000538253 COX10Q12887 443 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 NME3Q13232 169 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 XRCC4Q13426 336 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 ZNF235Q14590 738 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 RASA2Q15283 850 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 EML3Q32P44 896 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 C5orf22Q49AR2 442 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 ERAP2Q6P179 960 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 SYDE1Q6ZW31 735 aaPredicted RBP3.66□□□□□ -1.82
PTPN22-211ENST00000538253 USP30Q70CQ3 517 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 CEP68Q76N32 757 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 SNX32Q86XE0 403 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 PASD1Q8IV76 773 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 ATPAF2Q8N5M1 289 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 TERB1Q8NA31 727 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 ZMIZ2Q8NF64 920 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 ITFG1Q8TB96 612 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 CENPIQ92674 756 aaPredicted RBP3.66□□□□□ -1.82
PTPN22-211ENST00000538253 SLC39A13Q96H72 371 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 FAM83CQ9BQN1 747 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 FAM129AQ9BZQ8 928 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 ZDHHC5Q9C0B5 715 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 HACD3Q9P035 362 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 HCSTQ9UBK5 93 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 IPO11Q9UI26 975 aaKnown RBP3.66□□□□□ -1.82
PTPN22-211ENST00000538253 VPS28Q9UK41 221 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 AP4E1Q9UPM8 1137 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 DMTF1Q9Y222 760 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 STARD13Q9Y3M8 1113 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 PCDHGA5Q9Y5G8 931 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 SLC30A1Q9Y6M5 507 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 A0A0A0MRY4 1105 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 DRGXA6NNA5 263 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 ERI2A8K979 691 aaKnown RBP3.66□□□□□ -1.82
PTPN22-211ENST00000538253 LSM1O15116 133 aaKnown RBP3.66□□□□□ -1.82
PTPN22-211ENST00000538253 TBL1XO60907 577 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 SKAP2O75563 359 aaPredicted RBP3.66□□□□□ -1.82
PTPN22-211ENST00000538253 TUBBP07437 444 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 PLEKP08567 350 aaPredicted RBP3.66□□□□□ -1.82
PTPN22-211ENST00000538253 PYGMP11217 842 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 IL9P15248 144 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 ZNF16P17020 682 aaPredicted RBP3.66□□□□□ -1.82
PTPN22-211ENST00000538253 PTPN7P35236 360 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 WNT7BP56706 349 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 OVGP1Q12889 678 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 P3H1Q32P28 736 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 FNDC3BQ53EP0 1204 aaKnown RBP3.66□□□□□ -1.82
PTPN22-211ENST00000538253 LCE2DQ5TA82 110 aaPredicted RBP3.66□□□□□ -1.82
PTPN22-211ENST00000538253 RWDD4Q6NW29 188 aaKnown RBP3.66□□□□□ -1.82
PTPN22-211ENST00000538253 IL27RAQ6UWB1 636 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 Q6ZNB5 142 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 APTXQ7Z2E3 356 aaKnown RBP3.66□□□□□ -1.82
PTPN22-211ENST00000538253 NANOGNBQ7Z5D8 188 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 TAC4Q86UU9 113 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 LONP2Q86WA8 852 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 DENND1CQ8IV53 801 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 RTL3Q8N8U3 475 aaKnown RBP3.66□□□□□ -1.82
PTPN22-211ENST00000538253 TET1Q8NFU7 2136 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 HEXDCQ8WVB3 486 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 PRCCQ92733 491 aaPredicted RBP3.66□□□□□ -1.82
PTPN22-211ENST00000538253 NT5C3BQ969T7 300 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 CLDN23Q96B33 292 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 SH3KBP1Q96B97 665 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 MCEEQ96PE7 176 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 CPXM1Q96SM3 734 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 KXD1Q9BQD3 176 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms