RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 TMC7Q7Z402 723 aa10.81□□□□□ -0.68
CLIP1-209ENST00000537178 SYT12Q8IV01 421 aa10.81□□□□□ -0.68
CLIP1-209ENST00000537178 C8orf59Q8N0T1 100 aaPredicted RBP10.81□□□□□ -0.68
CLIP1-209ENST00000537178 SERPINB11Q96P15 392 aa10.81□□□□□ -0.68
CLIP1-209ENST00000537178 TMEM216Q9P0N5 145 aa10.81□□□□□ -0.68
CLIP1-209ENST00000537178 OPTCQ9UBM4 332 aa10.81□□□□□ -0.68
CLIP1-209ENST00000537178 ANAPC2Q9UJX6 822 aa10.81□□□□□ -0.68
CLIP1-209ENST00000537178 INVSQ9Y283 1065 aa10.81□□□□□ -0.68
CLIP1-209ENST00000537178 CATP04040 527 aaKnown RBP10.81□□□□□ -0.68
CLIP1-209ENST00000537178 CYP2A6P11509 494 aaPredicted RBP10.81□□□□□ -0.68
CLIP1-209ENST00000537178 ITGB6P18564 788 aa10.81□□□□□ -0.68
CLIP1-209ENST00000537178 LGALS3BPQ08380 585 aa10.81□□□□□ -0.68
CLIP1-209ENST00000537178 SCARA3Q6AZY7 606 aa10.81□□□□□ -0.68
CLIP1-209ENST00000537178 OVOS1Q6IE37 1185 aa10.81□□□□□ -0.68
CLIP1-209ENST00000537178 CYP2R1Q6VVX0 501 aa10.81□□□□□ -0.68
CLIP1-209ENST00000537178 KYAT3Q6YP21 454 aaKnown RBP10.81□□□□□ -0.68
CLIP1-209ENST00000537178 C4orf19Q8IY42 314 aa10.81□□□□□ -0.68
CLIP1-209ENST00000537178 STK40Q8N2I9 435 aa10.81□□□□□ -0.68
CLIP1-209ENST00000537178 EEF1AKMT1Q8WVE0 214 aa10.81□□□□□ -0.68
CLIP1-209ENST00000537178 SLC5A5Q92911 643 aa10.81□□□□□ -0.68
CLIP1-209ENST00000537178 VPS45Q9NRW7 570 aa10.81□□□□□ -0.68
CLIP1-209ENST00000537178 DDX20Q9UHI6 824 aaKnown RBP10.81□□□□□ -0.68
CLIP1-209ENST00000537178 FBXO10Q9UK96 956 aa10.81□□□□□ -0.68
CLIP1-209ENST00000537178 IGSF6O95976 241 aa10.81□□□□□ -0.68
CLIP1-209ENST00000537178 CCR4P51679 360 aa10.81□□□□□ -0.68
CLIP1-209ENST00000537178 GTF2A2P52657 109 aa10.81□□□□□ -0.68
CLIP1-209ENST00000537178 CDC42P60953 191 aa10.81□□□□□ -0.68
CLIP1-209ENST00000537178 SRP54P61011 504 aaKnown RBP10.81□□□□□ -0.68
CLIP1-209ENST00000537178 PAN2Q504Q3 1202 aaKnown RBP10.81□□□□□ -0.68
CLIP1-209ENST00000537178 PLEKHH3Q7Z736 793 aa10.81□□□□□ -0.68
CLIP1-209ENST00000537178 MAGEC3Q8TD91 643 aa10.81□□□□□ -0.68
CLIP1-209ENST00000537178 MYLPFQ96A32 169 aa10.81□□□□□ -0.68
CLIP1-209ENST00000537178 CCDC167Q9P0B6 97 aa10.81□□□□□ -0.68
CLIP1-209ENST00000537178 ZNF232Q9UNY5 417 aa10.81□□□□□ -0.68
CLIP1-209ENST00000537178 ARIH1Q9Y4X5 557 aaPredicted RBP10.81□□□□□ -0.68
CLIP1-209ENST00000537178 PCDHGA4Q9Y5G9 962 aa10.81□□□□□ -0.68
CLIP1-209ENST00000537178 HACD1B0YJ81 288 aa10.8□□□□□ -0.68
CLIP1-209ENST00000537178 TAF4O00268 1085 aa10.8□□□□□ -0.68
CLIP1-209ENST00000537178 KPNA6O60684 536 aa10.8□□□□□ -0.68
CLIP1-209ENST00000537178 CKBP12277 381 aa10.8□□□□□ -0.68
CLIP1-209ENST00000537178 OR1E1P30953 314 aa10.8□□□□□ -0.68
CLIP1-209ENST00000537178 MCOLN2Q8IZK6 566 aa10.8□□□□□ -0.68
CLIP1-209ENST00000537178 CELF6Q96J87 481 aaKnown RBP10.8□□□□□ -0.68
CLIP1-209ENST00000537178 NDOR1Q9UHB4 597 aa10.8□□□□□ -0.68
CLIP1-209ENST00000537178 N6AMT1Q9Y5N5 214 aa10.8□□□□□ -0.68
CLIP1-209ENST00000537178 BTN3A1O00481 513 aa10.8□□□□□ -0.68
CLIP1-209ENST00000537178 CES2O00748 559 aa10.8□□□□□ -0.68
CLIP1-209ENST00000537178 KCNQ2O43526 872 aa10.8□□□□□ -0.68
CLIP1-209ENST00000537178 DCXO43602 365 aa10.8□□□□□ -0.68
CLIP1-209ENST00000537178 ALADP13716 330 aa10.8□□□□□ -0.68
CLIP1-209ENST00000537178 TPH1P17752 444 aa10.8□□□□□ -0.68
CLIP1-209ENST00000537178 WEE1P30291 646 aa10.8□□□□□ -0.68
CLIP1-209ENST00000537178 NTSP30990 170 aa10.8□□□□□ -0.68
CLIP1-209ENST00000537178 RAB27AP51159 221 aa10.8□□□□□ -0.68
CLIP1-209ENST00000537178 POLR2LP62875 67 aaKnown RBP10.8□□□□□ -0.68
CLIP1-209ENST00000537178 PREPLQ4J6C6 727 aaPredicted RBP10.8□□□□□ -0.68
CLIP1-209ENST00000537178 SLC47A2Q86VL8 602 aa10.8□□□□□ -0.68
CLIP1-209ENST00000537178 POU5F2Q8N7G0 328 aa10.8□□□□□ -0.68
CLIP1-209ENST00000537178 FBXO28Q9NVF7 368 aa10.8□□□□□ -0.68
CLIP1-209ENST00000537178 THG1LQ9NWX6 298 aaKnown RBP10.8□□□□□ -0.68
CLIP1-209ENST00000537178 CASZ1Q86V15 1759 aa10.8□□□□□ -0.68
CLIP1-209ENST00000537178 MYH2Q9UKX2 1941 aa10.8□□□□□ -0.68
CLIP1-209ENST00000537178 TRDMT1O14717 391 aaKnown RBP10.8□□□□□ -0.68
CLIP1-209ENST00000537178 ADARP55265 1226 aaKnown RBP10.8□□□□□ -0.68
CLIP1-209ENST00000537178 TCEAL5Q5H9L2 206 aa10.8□□□□□ -0.68
CLIP1-209ENST00000537178 DDI2Q5TDH0 399 aa10.8□□□□□ -0.68
CLIP1-209ENST00000537178 MFSD7Q6UXD7 560 aa10.8□□□□□ -0.68
CLIP1-209ENST00000537178 KBTBD2Q8IY47 623 aa10.8□□□□□ -0.68
CLIP1-209ENST00000537178 RNF148Q8N7C7 305 aa10.8□□□□□ -0.68
CLIP1-209ENST00000537178 STK32AQ8WU08 396 aa10.8□□□□□ -0.68
CLIP1-209ENST00000537178 PRCCQ92733 491 aaPredicted RBP10.8□□□□□ -0.68
CLIP1-209ENST00000537178 UBE2E3Q969T4 207 aa10.8□□□□□ -0.68
CLIP1-209ENST00000537178 C1QTNF7Q9BXJ2 289 aa10.8□□□□□ -0.68
CLIP1-209ENST00000537178 DDX43Q9NXZ2 648 aaKnown RBP10.8□□□□□ -0.68
CLIP1-209ENST00000537178 EHD3Q9NZN3 535 aa10.8□□□□□ -0.68
CLIP1-209ENST00000537178 AKAP7Q9P0M2 348 aaPredicted RBP10.8□□□□□ -0.68
CLIP1-209ENST00000537178 SORCS3Q9UPU3 1222 aa10.8□□□□□ -0.68
CLIP1-209ENST00000537178 CHURC1-FNTBB4DL54 471 aa10.8□□□□□ -0.68
CLIP1-209ENST00000537178 AKAP3O75969 853 aa10.8□□□□□ -0.68
CLIP1-209ENST00000537178 GLI1P08151 1106 aa10.8□□□□□ -0.68
CLIP1-209ENST00000537178 MYL4P12829 197 aa10.8□□□□□ -0.68
CLIP1-209ENST00000537178 MGAT1P26572 445 aa10.8□□□□□ -0.68
CLIP1-209ENST00000537178 KCTD21Q4G0X4 260 aa10.8□□□□□ -0.68
CLIP1-209ENST00000537178 ARHGAP22Q7Z5H3 698 aa10.8□□□□□ -0.68
CLIP1-209ENST00000537178 ZNF557Q8N988 423 aaPredicted RBP10.8□□□□□ -0.68
CLIP1-209ENST00000537178 OR52L1Q8NGH7 329 aa10.8□□□□□ -0.68
CLIP1-209ENST00000537178 SLC9A7Q96T83 725 aa10.8□□□□□ -0.68
CLIP1-209ENST00000537178 ZNF184Q99676 751 aaPredicted RBP10.8□□□□□ -0.68
CLIP1-209ENST00000537178 UNKQ9C0B0 810 aaKnown RBP10.8□□□□□ -0.68
CLIP1-209ENST00000537178 PRDM16Q9HAZ2 1276 aa10.8□□□□□ -0.68
CLIP1-209ENST00000537178 C15orf41Q9Y2V0 281 aa10.8□□□□□ -0.68
CLIP1-209ENST00000537178 PCDHB12Q9Y5F1 795 aa10.8□□□□□ -0.68
CLIP1-209ENST00000537178 MYH3P11055 1940 aa10.79□□□□□ -0.68
CLIP1-209ENST00000537178 MYH8P13535 1937 aa10.79□□□□□ -0.68
CLIP1-209ENST00000537178 CNTNAP2Q9UHC6 1331 aa10.79□□□□□ -0.68
CLIP1-209ENST00000537178 MAP2K7O14733 419 aa10.79□□□□□ -0.68
CLIP1-209ENST00000537178 SPTLC1O15269 473 aa10.79□□□□□ -0.68
CLIP1-209ENST00000537178 FGRP09769 529 aa10.79□□□□□ -0.68
CLIP1-209ENST00000537178 IDH2P48735 452 aaKnown RBP10.79□□□□□ -0.68
CLIP1-209ENST00000537178 TUBP50607 506 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms