RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 SIN3BO75182 1162 aa11.58□□□□□ -0.56
TNFRSF1A-208ENST00000536194 ALDH1A2O94788 518 aa11.58□□□□□ -0.56
TNFRSF1A-208ENST00000536194 SRCP12931 536 aa11.58□□□□□ -0.56
TNFRSF1A-208ENST00000536194 ERCC2P18074 760 aa11.58□□□□□ -0.56
TNFRSF1A-208ENST00000536194 BCKDHBP21953 392 aa11.58□□□□□ -0.56
TNFRSF1A-208ENST00000536194 IL4RP24394 825 aa11.58□□□□□ -0.56
TNFRSF1A-208ENST00000536194 SSR1P43307 286 aaKnown RBP11.58□□□□□ -0.56
TNFRSF1A-208ENST00000536194 HCAR3P49019 387 aa11.58□□□□□ -0.56
TNFRSF1A-208ENST00000536194 VAV2P52735 878 aa11.58□□□□□ -0.56
TNFRSF1A-208ENST00000536194 ST8SIA6P61647 398 aa11.58□□□□□ -0.56
TNFRSF1A-208ENST00000536194 STARD3Q14849 445 aa11.58□□□□□ -0.56
TNFRSF1A-208ENST00000536194 POLD3Q15054 466 aaPredicted RBP11.58□□□□□ -0.56
TNFRSF1A-208ENST00000536194 E2F5Q15329 346 aa11.58□□□□□ -0.56
TNFRSF1A-208ENST00000536194 C9orf64Q5T6V5 341 aa11.58□□□□□ -0.56
TNFRSF1A-208ENST00000536194 ZC3H14Q6PJT7 736 aaKnown RBP11.58□□□□□ -0.56
TNFRSF1A-208ENST00000536194 TP53INP2Q8IXH6 220 aa11.58□□□□□ -0.56
TNFRSF1A-208ENST00000536194 ABCA7Q8IZY2 2146 aa11.58□□□□□ -0.56
TNFRSF1A-208ENST00000536194 UMODL1-AS1Q8N2C9 162 aa11.58□□□□□ -0.56
TNFRSF1A-208ENST00000536194 SH2D3CQ8N5H7 860 aa11.58□□□□□ -0.56
TNFRSF1A-208ENST00000536194 NETO2Q8NC67 525 aa11.58□□□□□ -0.56
TNFRSF1A-208ENST00000536194 OR2T3Q8NH03 318 aa11.58□□□□□ -0.56
TNFRSF1A-208ENST00000536194 GAB3Q8WWW8 586 aa11.58□□□□□ -0.56
TNFRSF1A-208ENST00000536194 PTPRN2Q92932 1015 aa11.58□□□□□ -0.56
TNFRSF1A-208ENST00000536194 HMCESQ96FZ2 354 aa11.58□□□□□ -0.56
TNFRSF1A-208ENST00000536194 CSPG4P5Q96PW8 444 aa11.58□□□□□ -0.56
TNFRSF1A-208ENST00000536194 PPP1R9BQ96SB3 815 aa11.58□□□□□ -0.56
TNFRSF1A-208ENST00000536194 SPON2Q9BUD6 331 aa11.58□□□□□ -0.56
TNFRSF1A-208ENST00000536194 C2orf49Q9BVC5 232 aaPredicted RBP11.58□□□□□ -0.56
TNFRSF1A-208ENST00000536194 MAGEH1Q9H213 219 aa11.58□□□□□ -0.56
TNFRSF1A-208ENST00000536194 LRRC19Q9H756 370 aa11.58□□□□□ -0.56
TNFRSF1A-208ENST00000536194 CATSPERBQ9H7T0 1116 aa11.58□□□□□ -0.56
TNFRSF1A-208ENST00000536194 ATP13A1Q9HD20 1204 aa11.58□□□□□ -0.56
TNFRSF1A-208ENST00000536194 ETNK2Q9NVF9 386 aa11.58□□□□□ -0.56
TNFRSF1A-208ENST00000536194 BCCIPQ9P287 314 aaKnown RBP eCLIP11.58□□□□□ -0.56
TNFRSF1A-208ENST00000536194 TRIM10Q9UDY6 481 aa11.58□□□□□ -0.56
TNFRSF1A-208ENST00000536194 LCMT1Q9UIC8 334 aa11.58□□□□□ -0.56
TNFRSF1A-208ENST00000536194 SLC25A13Q9UJS0 675 aa11.58□□□□□ -0.56
TNFRSF1A-208ENST00000536194 EDDM13A0A1B0GTR0 161 aa11.57□□□□□ -0.56
TNFRSF1A-208ENST00000536194 GOLGA6L6A8MZA4 724 aa11.57□□□□□ -0.56
TNFRSF1A-208ENST00000536194 RASA4BC9J798 803 aa11.57□□□□□ -0.56
TNFRSF1A-208ENST00000536194 PJA2O43164 708 aa11.57□□□□□ -0.56
TNFRSF1A-208ENST00000536194 RASA4O43374 803 aa11.57□□□□□ -0.56
TNFRSF1A-208ENST00000536194 BUB1O43683 1085 aa11.57□□□□□ -0.56
TNFRSF1A-208ENST00000536194 ZNF821O75541 412 aaPredicted RBP11.57□□□□□ -0.56
TNFRSF1A-208ENST00000536194 RPP40O75818 363 aaKnown RBP11.57□□□□□ -0.56
TNFRSF1A-208ENST00000536194 COMTP21964 271 aa11.57□□□□□ -0.56
TNFRSF1A-208ENST00000536194 AMPD1P23109 780 aa11.57□□□□□ -0.56
TNFRSF1A-208ENST00000536194 P2RY2P41231 377 aa11.57□□□□□ -0.56
TNFRSF1A-208ENST00000536194 NOP2P46087 812 aaKnown RBP11.57□□□□□ -0.56
TNFRSF1A-208ENST00000536194 CDH6P55285 790 aa11.57□□□□□ -0.56
TNFRSF1A-208ENST00000536194 KRT83P78385 493 aa11.57□□□□□ -0.56
TNFRSF1A-208ENST00000536194 DPYSL3Q14195 570 aa11.57□□□□□ -0.56
TNFRSF1A-208ENST00000536194 HADHQ16836 314 aaKnown RBP11.57□□□□□ -0.56
TNFRSF1A-208ENST00000536194 MAP7D1Q3KQU3 841 aa11.57□□□□□ -0.56
TNFRSF1A-208ENST00000536194 AFMIDQ63HM1 303 aa11.57□□□□□ -0.56
TNFRSF1A-208ENST00000536194 IL31Q6EBC2 164 aa11.57□□□□□ -0.56
TNFRSF1A-208ENST00000536194 Q6ZVU0 165 aa11.57□□□□□ -0.56
TNFRSF1A-208ENST00000536194 CACUL1Q86Y37 369 aa11.57□□□□□ -0.56
TNFRSF1A-208ENST00000536194 TMPRSS6Q8IU80 811 aa11.57□□□□□ -0.56
TNFRSF1A-208ENST00000536194 LRRC8AQ8IWT6 810 aa11.57□□□□□ -0.56
TNFRSF1A-208ENST00000536194 ARHGAP12Q8IWW6 846 aa11.57□□□□□ -0.56
TNFRSF1A-208ENST00000536194 PGBD3Q8N328 593 aa11.57□□□□□ -0.56
TNFRSF1A-208ENST00000536194 FAM160A2Q8N612 972 aaPredicted RBP11.57□□□□□ -0.56
TNFRSF1A-208ENST00000536194 SUMF1Q8NBK3 374 aa11.57□□□□□ -0.56
TNFRSF1A-208ENST00000536194 TPCN2Q8NHX9 752 aa11.57□□□□□ -0.56
TNFRSF1A-208ENST00000536194 CELF6Q96J87 481 aaKnown RBP11.57□□□□□ -0.56
TNFRSF1A-208ENST00000536194 FAM129BQ96TA1 746 aa11.57□□□□□ -0.56
TNFRSF1A-208ENST00000536194 SLC39A8Q9C0K1 460 aa11.57□□□□□ -0.56
TNFRSF1A-208ENST00000536194 EPC1Q9H2F5 836 aa11.57□□□□□ -0.56
TNFRSF1A-208ENST00000536194 SUN2Q9UH99 717 aa11.57□□□□□ -0.56
TNFRSF1A-208ENST00000536194 MBD1Q9UIS9 605 aaPredicted RBP11.57□□□□□ -0.56
TNFRSF1A-208ENST00000536194 ALG6Q9Y672 507 aa11.57□□□□□ -0.56
TNFRSF1A-208ENST00000536194 VPS13AQ96RL7 3174 aa11.57□□□□□ -0.56
TNFRSF1A-208ENST00000536194 MYO15AQ9UKN7 3530 aa11.57□□□□□ -0.56
TNFRSF1A-208ENST00000536194 NUMA1Q14980 2115 aa11.56□□□□□ -0.56
TNFRSF1A-208ENST00000536194 TARSL2A2RTX5 802 aaKnown RBP11.56□□□□□ -0.56
TNFRSF1A-208ENST00000536194 C3orf70A6NLC5 250 aaPredicted RBP11.56□□□□□ -0.56
TNFRSF1A-208ENST00000536194 BTNL10A8MVZ5 291 aa11.56□□□□□ -0.56
TNFRSF1A-208ENST00000536194 H3BRJ5 948 aa11.56□□□□□ -0.56
TNFRSF1A-208ENST00000536194 DAPK3O43293 454 aa11.56□□□□□ -0.56
TNFRSF1A-208ENST00000536194 KDELR3O43731 214 aa11.56□□□□□ -0.56
TNFRSF1A-208ENST00000536194 IPO7O95373 1038 aaKnown RBP11.56□□□□□ -0.56
TNFRSF1A-208ENST00000536194 CNR2P34972 360 aa11.56□□□□□ -0.56
TNFRSF1A-208ENST00000536194 ETFBP38117 255 aa11.56□□□□□ -0.56
TNFRSF1A-208ENST00000536194 ARL4AP40617 200 aa11.56□□□□□ -0.56
TNFRSF1A-208ENST00000536194 SERPINH1P50454 418 aaKnown RBP11.56□□□□□ -0.56
TNFRSF1A-208ENST00000536194 ZNF135P52742 658 aaPredicted RBP11.56□□□□□ -0.56
TNFRSF1A-208ENST00000536194 YBEYP58557 167 aaPredicted RBP11.56□□□□□ -0.56
TNFRSF1A-208ENST00000536194 RPS14P62263 151 aaKnown RBP11.56□□□□□ -0.56
TNFRSF1A-208ENST00000536194 CCZ1BP86790 482 aa11.56□□□□□ -0.56
TNFRSF1A-208ENST00000536194 CCZ1P86791 482 aaPredicted RBP11.56□□□□□ -0.56
TNFRSF1A-208ENST00000536194 SERINC3Q13530 473 aa11.56□□□□□ -0.56
TNFRSF1A-208ENST00000536194 DLG2Q15700 870 aa11.56□□□□□ -0.56
TNFRSF1A-208ENST00000536194 PARP15Q460N3 678 aa11.56□□□□□ -0.56
TNFRSF1A-208ENST00000536194 KIAA1324Q6UXG2 1013 aaKnown RBP11.56□□□□□ -0.56
TNFRSF1A-208ENST00000536194 LEKR1Q6ZMV7 388 aa11.56□□□□□ -0.56
TNFRSF1A-208ENST00000536194 ARHGAP36Q6ZRI8 547 aa11.56□□□□□ -0.56
TNFRSF1A-208ENST00000536194 ASCL5Q7RTU5 278 aa11.56□□□□□ -0.56
TNFRSF1A-208ENST00000536194 KBTBD6Q86V97 674 aa11.56□□□□□ -0.56
TNFRSF1A-208ENST00000536194 STK40Q8N2I9 435 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms