RNA–Protein interactions for RNA: ENST00000535810.1

CHD4-204, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-204ENST00000535810 KCTD12Q96CX2 325 aaKnown RBP9.09□□□□□ -0.95
CHD4-204ENST00000535810 C1orf74Q96LT6 269 aa9.09□□□□□ -0.95
CHD4-204ENST00000535810 RAB6CQ9H0N0 254 aa9.09□□□□□ -0.95
CHD4-204ENST00000535810 PCED1AQ9H1Q7 454 aa9.09□□□□□ -0.95
CHD4-204ENST00000535810 PABPC3Q9H361 631 aaKnown RBP9.09□□□□□ -0.95
CHD4-204ENST00000535810 ZNF212Q9UDV6 495 aa9.09□□□□□ -0.95
CHD4-204ENST00000535810 SERGEFQ9UGK8 458 aa9.09□□□□□ -0.95
CHD4-204ENST00000535810 SUSD2Q9UGT4 822 aa9.09□□□□□ -0.95
CHD4-204ENST00000535810 TSR3Q9UJK0 312 aaKnown RBP9.09□□□□□ -0.95
CHD4-204ENST00000535810 ZMIZ1Q9ULJ6 1067 aa9.09□□□□□ -0.95
CHD4-204ENST00000535810 LAMA5O15230 3695 aa9.09□□□□□ -0.95
CHD4-204ENST00000535810 ASH1LQ9NR48 2969 aaKnown RBP9.09□□□□□ -0.95
CHD4-204ENST00000535810 IGF2RP11717 2491 aa9.08□□□□□ -0.96
CHD4-204ENST00000535810 A0A1B0GTH6 734 aa9.08□□□□□ -0.96
CHD4-204ENST00000535810 SYCE3A1L190 88 aa9.08□□□□□ -0.96
CHD4-204ENST00000535810 DRGXA6NNA5 263 aa9.08□□□□□ -0.96
CHD4-204ENST00000535810 SMTNL1A8MU46 457 aa9.08□□□□□ -0.96
CHD4-204ENST00000535810 E9PAM4 449 aa9.08□□□□□ -0.96
CHD4-204ENST00000535810 MID1O15344 667 aa9.08□□□□□ -0.96
CHD4-204ENST00000535810 RNASEH1O60930 286 aaKnown RBP9.08□□□□□ -0.96
CHD4-204ENST00000535810 ENDOD1O94919 500 aa9.08□□□□□ -0.96
CHD4-204ENST00000535810 KCNK5O95279 499 aa9.08□□□□□ -0.96
CHD4-204ENST00000535810 SEMA4FO95754 770 aa9.08□□□□□ -0.96
CHD4-204ENST00000535810 VAV1P15498 845 aa9.08□□□□□ -0.96
CHD4-204ENST00000535810 GNSP15586 552 aa9.08□□□□□ -0.96
CHD4-204ENST00000535810 FERP16591 822 aa9.08□□□□□ -0.96
CHD4-204ENST00000535810 SDC4P31431 198 aa9.08□□□□□ -0.96
CHD4-204ENST00000535810 PTPN9P43378 593 aa9.08□□□□□ -0.96
CHD4-204ENST00000535810 IQCB1Q15051 598 aa9.08□□□□□ -0.96
CHD4-204ENST00000535810 CST6Q15828 149 aa9.08□□□□□ -0.96
CHD4-204ENST00000535810 CDO1Q16878 200 aa9.08□□□□□ -0.96
CHD4-204ENST00000535810 C15orf59Q2T9L4 293 aaPredicted RBP9.08□□□□□ -0.96
CHD4-204ENST00000535810 CCDC14Q49A88 953 aa9.08□□□□□ -0.96
CHD4-204ENST00000535810 ACBD5Q5T8D3 534 aaPredicted RBP9.08□□□□□ -0.96
CHD4-204ENST00000535810 SH3PXD2AQ5TCZ1 1133 aa9.08□□□□□ -0.96
CHD4-204ENST00000535810 DCAF12L1Q5VU92 463 aa9.08□□□□□ -0.96
CHD4-204ENST00000535810 PSAPL1Q6NUJ1 521 aa9.08□□□□□ -0.96
CHD4-204ENST00000535810 LRRC31Q6UY01 552 aa9.08□□□□□ -0.96
CHD4-204ENST00000535810 USP30Q70CQ3 517 aa9.08□□□□□ -0.96
CHD4-204ENST00000535810 MON1BQ7L1V2 547 aa9.08□□□□□ -0.96
CHD4-204ENST00000535810 TFAP2DQ7Z6R9 452 aa9.08□□□□□ -0.96
CHD4-204ENST00000535810 SETD3Q86TU7 594 aaPredicted RBP9.08□□□□□ -0.96
CHD4-204ENST00000535810 MMAAQ8IVH4 418 aaKnown RBP9.08□□□□□ -0.96
CHD4-204ENST00000535810 C3orf20Q8ND61 904 aa9.08□□□□□ -0.96
CHD4-204ENST00000535810 C1orf216Q8TAB5 229 aa9.08□□□□□ -0.96
CHD4-204ENST00000535810 FRS2Q8WU20 508 aa9.08□□□□□ -0.96
CHD4-204ENST00000535810 RXFP2Q8WXD0 754 aa9.08□□□□□ -0.96
CHD4-204ENST00000535810 PTPRN2Q92932 1015 aa9.08□□□□□ -0.96
CHD4-204ENST00000535810 HAPLN3Q96S86 360 aa9.08□□□□□ -0.96
CHD4-204ENST00000535810 PPP1R9BQ96SB3 815 aa9.08□□□□□ -0.96
CHD4-204ENST00000535810 FAM129BQ96TA1 746 aa9.08□□□□□ -0.96
CHD4-204ENST00000535810 AGPAT1Q99943 283 aa9.08□□□□□ -0.96
CHD4-204ENST00000535810 SYT11Q9BT88 431 aa9.08□□□□□ -0.96
CHD4-204ENST00000535810 GTPBP2Q9BX10 602 aaKnown RBP9.08□□□□□ -0.96
CHD4-204ENST00000535810 ZMYND15Q9H091 742 aa9.08□□□□□ -0.96
CHD4-204ENST00000535810 BTBD1Q9H0C5 482 aa9.08□□□□□ -0.96
CHD4-204ENST00000535810 MUC3BQ9H195 1237 aa9.08□□□□□ -0.96
CHD4-204ENST00000535810 MIR1-1HGQ9H1L0 117 aa9.08□□□□□ -0.96
CHD4-204ENST00000535810 C6orf106Q9H6K1 298 aaPredicted RBP9.08□□□□□ -0.96
CHD4-204ENST00000535810 SEPT11Q9NVA2 429 aaKnown RBP9.08□□□□□ -0.96
CHD4-204ENST00000535810 MPP6Q9NZW5 540 aa9.08□□□□□ -0.96
CHD4-204ENST00000535810 ADAM22Q9P0K1 906 aa9.08□□□□□ -0.96
CHD4-204ENST00000535810 VPS28Q9UK41 221 aa9.08□□□□□ -0.96
CHD4-204ENST00000535810 MYO6Q9UM54 1294 aa9.08□□□□□ -0.96
CHD4-204ENST00000535810 SCML1Q9UN30 329 aa9.08□□□□□ -0.96
CHD4-204ENST00000535810 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.08□□□□□ -0.96
CHD4-204ENST00000535810 SLCO1B1Q9Y6L6 691 aa9.08□□□□□ -0.96
CHD4-204ENST00000535810 GCN1Q92616 2671 aaKnown RBP9.08□□□□□ -0.96
CHD4-204ENST00000535810 NYNRINQ9P2P1 1898 aaKnown RBP9.07□□□□□ -0.96
CHD4-204ENST00000535810 A0A0D9SEW6 157 aa9.07□□□□□ -0.96
CHD4-204ENST00000535810 A0A1B0GTW7 788 aa9.07□□□□□ -0.96
CHD4-204ENST00000535810 A0A1W2PP55 124 aa9.07□□□□□ -0.96
CHD4-204ENST00000535810 A0A1W2PQC6 194 aa9.07□□□□□ -0.96
CHD4-204ENST00000535810 TCRBV5S1A1TA0A578 114 aa9.07□□□□□ -0.96
CHD4-204ENST00000535810 LRRC53A6NM62 1247 aa9.07□□□□□ -0.96
CHD4-204ENST00000535810 ATP9BO43861 1147 aa9.07□□□□□ -0.96
CHD4-204ENST00000535810 SNAP91O60641 907 aa9.07□□□□□ -0.96
CHD4-204ENST00000535810 SRGAP2O75044 1071 aa9.07□□□□□ -0.96
CHD4-204ENST00000535810 CALB1P05937 261 aa9.07□□□□□ -0.96
CHD4-204ENST00000535810 RHOCP08134 193 aa9.07□□□□□ -0.96
CHD4-204ENST00000535810 SYPP08247 313 aa9.07□□□□□ -0.96
CHD4-204ENST00000535810 CCDC172P0C7W6 258 aa9.07□□□□□ -0.96
CHD4-204ENST00000535810 KRT3P12035 628 aa9.07□□□□□ -0.96
CHD4-204ENST00000535810 RFC1P35251 1148 aaPredicted RBP9.07□□□□□ -0.96
CHD4-204ENST00000535810 NNMTP40261 264 aa9.07□□□□□ -0.96
CHD4-204ENST00000535810 PSMD8P48556 350 aa9.07□□□□□ -0.96
CHD4-204ENST00000535810 NOVA1P51513 510 aaKnown RBP9.07□□□□□ -0.96
CHD4-204ENST00000535810 ATXN3P54252 364 aaPredicted RBP9.07□□□□□ -0.96
CHD4-204ENST00000535810 HDAC4P56524 1084 aa9.07□□□□□ -0.96
CHD4-204ENST00000535810 GRIK2Q13002 908 aa9.07□□□□□ -0.96
CHD4-204ENST00000535810 UAP1L1Q3KQV9 507 aa9.07□□□□□ -0.96
CHD4-204ENST00000535810 ZSCAN23Q3MJ62 389 aa9.07□□□□□ -0.96
CHD4-204ENST00000535810 C6orf118Q5T5N4 469 aa9.07□□□□□ -0.96
CHD4-204ENST00000535810 E4F1Q66K89 784 aaPredicted RBP9.07□□□□□ -0.96
CHD4-204ENST00000535810 LRSAM1Q6UWE0 723 aa9.07□□□□□ -0.96
CHD4-204ENST00000535810 UNQ6494/PRO21346Q6UXR6 183 aa9.07□□□□□ -0.96
CHD4-204ENST00000535810 STRADAQ7RTN6 431 aa9.07□□□□□ -0.96
CHD4-204ENST00000535810 IRF2BP2Q7Z5L9 587 aa9.07□□□□□ -0.96
CHD4-204ENST00000535810 STK40Q8N2I9 435 aa9.07□□□□□ -0.96
CHD4-204ENST00000535810 MINDY1Q8N5J2 469 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms