RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 MKS1Q9NXB0 559 aa9.23□□□□□ -0.93
SF3B2-216ENST00000534765 SRRDQ9UH36 339 aa9.23□□□□□ -0.93
SF3B2-216ENST00000534765 INPP5FQ9Y2H2 1132 aa9.23□□□□□ -0.93
SF3B2-216ENST00000534765 Q9Y3F1 56 aa9.23□□□□□ -0.93
SF3B2-216ENST00000534765 ARL5CA6NH57 179 aa9.23□□□□□ -0.93
SF3B2-216ENST00000534765 M0QYV0 167 aa9.23□□□□□ -0.93
SF3B2-216ENST00000534765 MAP3K6O95382 1288 aa9.23□□□□□ -0.93
SF3B2-216ENST00000534765 POMCP01189 267 aa9.23□□□□□ -0.93
SF3B2-216ENST00000534765 FAM58BPP0C7Q3 252 aa9.23□□□□□ -0.93
SF3B2-216ENST00000534765 CHKAP35790 457 aa9.23□□□□□ -0.93
SF3B2-216ENST00000534765 IST1P53990 364 aa9.23□□□□□ -0.93
SF3B2-216ENST00000534765 NUP107P57740 925 aa9.23□□□□□ -0.93
SF3B2-216ENST00000534765 LILRA4P59901 499 aa9.23□□□□□ -0.93
SF3B2-216ENST00000534765 PKN2Q16513 984 aaKnown RBP9.23□□□□□ -0.93
SF3B2-216ENST00000534765 TRMT5Q32P41 509 aaKnown RBP9.23□□□□□ -0.93
SF3B2-216ENST00000534765 DCAF6Q58WW2 860 aa9.23□□□□□ -0.93
SF3B2-216ENST00000534765 FAM117BQ6P1L5 589 aa9.23□□□□□ -0.93
SF3B2-216ENST00000534765 MFSD7Q6UXD7 560 aa9.23□□□□□ -0.93
SF3B2-216ENST00000534765 ALYREFQ86V81 257 aaKnown RBP9.23□□□□□ -0.93
SF3B2-216ENST00000534765 PPWD1Q96BP3 646 aaKnown RBP9.23□□□□□ -0.93
SF3B2-216ENST00000534765 CFAP57Q96MR6 1250 aa9.23□□□□□ -0.93
SF3B2-216ENST00000534765 NEU2Q9Y3R4 380 aa9.23□□□□□ -0.93
SF3B2-216ENST00000534765 PROSCO94903 275 aa9.22□□□□□ -0.93
SF3B2-216ENST00000534765 TCN1P20061 433 aaPredicted RBP9.22□□□□□ -0.93
SF3B2-216ENST00000534765 MSX2P35548 267 aaPredicted RBP9.22□□□□□ -0.93
SF3B2-216ENST00000534765 TMPRSS15P98073 1019 aa9.22□□□□□ -0.93
SF3B2-216ENST00000534765 TRAF2Q12933 501 aa9.22□□□□□ -0.93
SF3B2-216ENST00000534765 NRF1Q16656 503 aa9.22□□□□□ -0.93
SF3B2-216ENST00000534765 CA9Q16790 459 aa9.22□□□□□ -0.93
SF3B2-216ENST00000534765 C6orf52Q5T4I8 152 aa9.22□□□□□ -0.93
SF3B2-216ENST00000534765 TWF2Q6IBS0 349 aaKnown RBP9.22□□□□□ -0.93
SF3B2-216ENST00000534765 CTAGE3PQ8IX95 158 aa9.22□□□□□ -0.93
SF3B2-216ENST00000534765 RNF148Q8N7C7 305 aa9.22□□□□□ -0.93
SF3B2-216ENST00000534765 HHIPL1Q96JK4 782 aa9.22□□□□□ -0.93
SF3B2-216ENST00000534765 MTG1Q9BT17 334 aaPredicted RBP9.22□□□□□ -0.93
SF3B2-216ENST00000534765 ROPN1BQ9BZX4 212 aaPredicted RBP9.22□□□□□ -0.93
SF3B2-216ENST00000534765 ROPN1Q9HAT0 212 aaPredicted RBP9.22□□□□□ -0.93
SF3B2-216ENST00000534765 ZDHHC18Q9NUE0 388 aa9.22□□□□□ -0.93
SF3B2-216ENST00000534765 TMLHEQ9NVH6 421 aa9.22□□□□□ -0.93
SF3B2-216ENST00000534765 GIN1Q9NXP7 522 aa9.22□□□□□ -0.93
SF3B2-216ENST00000534765 PTCH2Q9Y6C5 1203 aa9.22□□□□□ -0.93
SF3B2-216ENST00000534765 HNRNPCL1O60812 293 aaKnown RBP9.22□□□□□ -0.93
SF3B2-216ENST00000534765 TNFAIP8O95379 198 aa9.22□□□□□ -0.93
SF3B2-216ENST00000534765 KRT4P19013 534 aa9.22□□□□□ -0.93
SF3B2-216ENST00000534765 CLK3P49761 638 aaKnown RBP9.22□□□□□ -0.93
SF3B2-216ENST00000534765 ACLYP53396 1101 aa9.22□□□□□ -0.93
SF3B2-216ENST00000534765 ITGA8P53708 1063 aa9.22□□□□□ -0.93
SF3B2-216ENST00000534765 WDR4P57081 412 aaKnown RBP9.22□□□□□ -0.93
SF3B2-216ENST00000534765 NKX3-2P78367 333 aa9.22□□□□□ -0.93
SF3B2-216ENST00000534765 DHX34Q14147 1143 aaKnown RBP9.22□□□□□ -0.93
SF3B2-216ENST00000534765 PPP6R3Q5H9R7 873 aaPredicted RBP9.22□□□□□ -0.93
SF3B2-216ENST00000534765 OTUD1Q5VV17 481 aaPredicted RBP9.22□□□□□ -0.93
SF3B2-216ENST00000534765 VASH1Q7L8A9 365 aaPredicted RBP9.22□□□□□ -0.93
SF3B2-216ENST00000534765 TMCO2Q7Z6W1 182 aaPredicted RBP9.22□□□□□ -0.93
SF3B2-216ENST00000534765 SLC13A5Q86YT5 568 aaPredicted RBP9.22□□□□□ -0.93
SF3B2-216ENST00000534765 ARID3BQ8IVW6 561 aaPredicted RBP9.22□□□□□ -0.93
SF3B2-216ENST00000534765 ULK2Q8IYT8 1036 aa9.22□□□□□ -0.93
SF3B2-216ENST00000534765 FEZF2Q8TBJ5 459 aa9.22□□□□□ -0.93
SF3B2-216ENST00000534765 OSBPL6Q9BZF3 934 aa9.22□□□□□ -0.93
SF3B2-216ENST00000534765 AVENQ9NQS1 362 aaPredicted RBP9.22□□□□□ -0.93
SF3B2-216ENST00000534765 FAM105AQ9NUU6 356 aa9.22□□□□□ -0.93
SF3B2-216ENST00000534765 RABGEF1Q9UJ41 708 aa9.22□□□□□ -0.93
SF3B2-216ENST00000534765 SPEF1Q9Y4P9 236 aa9.22□□□□□ -0.93
SF3B2-216ENST00000534765 COL4A6Q14031 1691 aa9.22□□□□□ -0.93
SF3B2-216ENST00000534765 CES2O00748 559 aa9.22□□□□□ -0.93
SF3B2-216ENST00000534765 PAPSS1O43252 624 aaPredicted RBP9.22□□□□□ -0.93
SF3B2-216ENST00000534765 INHAP05111 366 aa9.22□□□□□ -0.93
SF3B2-216ENST00000534765 MAGP20916 626 aa9.22□□□□□ -0.93
SF3B2-216ENST00000534765 IVDP26440 423 aa9.22□□□□□ -0.93
SF3B2-216ENST00000534765 GNA12Q03113 381 aa9.22□□□□□ -0.93
SF3B2-216ENST00000534765 TAF12Q16514 161 aa9.22□□□□□ -0.93
SF3B2-216ENST00000534765 CYP2A13Q16696 494 aa9.22□□□□□ -0.93
SF3B2-216ENST00000534765 GOLGA7BQ2TAP0 167 aa9.22□□□□□ -0.93
SF3B2-216ENST00000534765 SLC45A4Q5BKX6 768 aa9.22□□□□□ -0.93
SF3B2-216ENST00000534765 EFHC1Q5JVL4 640 aa9.22□□□□□ -0.93
SF3B2-216ENST00000534765 FBXO47Q5MNV8 452 aa9.22□□□□□ -0.93
SF3B2-216ENST00000534765 DUPD1Q68J44 220 aa9.22□□□□□ -0.93
SF3B2-216ENST00000534765 USP37Q86T82 979 aa9.22□□□□□ -0.93
SF3B2-216ENST00000534765 ZNF280BQ86YH2 543 aa9.22□□□□□ -0.93
SF3B2-216ENST00000534765 RBM15BQ8NDT2 890 aaKnown RBP9.22□□□□□ -0.93
SF3B2-216ENST00000534765 ZNF75CPQ92670 426 aaPredicted RBP9.22□□□□□ -0.93
SF3B2-216ENST00000534765 AZIN2Q96A70 460 aa9.22□□□□□ -0.93
SF3B2-216ENST00000534765 TAMM41Q96BW9 452 aa9.22□□□□□ -0.93
SF3B2-216ENST00000534765 KCNK16Q96T55 309 aa9.22□□□□□ -0.93
SF3B2-216ENST00000534765 NRDE2Q9H7Z3 1164 aa9.22□□□□□ -0.93
SF3B2-216ENST00000534765 AAASQ9NRG9 546 aa9.22□□□□□ -0.93
SF3B2-216ENST00000534765 GPATCH2LQ9NWQ4 482 aa9.22□□□□□ -0.93
SF3B2-216ENST00000534765 WARS2Q9UGM6 360 aaKnown RBP9.22□□□□□ -0.93
SF3B2-216ENST00000534765 ITGA11Q9UKX5 1188 aa9.22□□□□□ -0.93
SF3B2-216ENST00000534765 STARD13Q9Y3M8 1113 aa9.22□□□□□ -0.93
SF3B2-216ENST00000534765 SH3PXD2BA1X283 911 aa9.21□□□□□ -0.93
SF3B2-216ENST00000534765 A8MXQ7 604 aa9.21□□□□□ -0.93
SF3B2-216ENST00000534765 CFAP99D6REC4 459 aa9.21□□□□□ -0.93
SF3B2-216ENST00000534765 PHF2O75151 1096 aa9.21□□□□□ -0.93
SF3B2-216ENST00000534765 OAS1P00973 400 aaKnown RBP9.21□□□□□ -0.93
SF3B2-216ENST00000534765 CHRNA3P32297 505 aa9.21□□□□□ -0.93
SF3B2-216ENST00000534765 PBX3P40426 434 aa9.21□□□□□ -0.93
SF3B2-216ENST00000534765 GSSP48637 474 aa9.21□□□□□ -0.93
SF3B2-216ENST00000534765 MNX1P50219 401 aaPredicted RBP9.21□□□□□ -0.93
SF3B2-216ENST00000534765 GDF10P55107 478 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms