RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 TRPM6Q9BX84 2022 aa10.71□□□□□ -0.69
CAPN1-225ENST00000533704 HSD3B7Q9H2F3 369 aa10.71□□□□□ -0.69
CAPN1-225ENST00000533704 AASDHPPTQ9NRN7 309 aa10.71□□□□□ -0.69
CAPN1-225ENST00000533704 VPS51Q9UID3 782 aa10.71□□□□□ -0.69
CAPN1-225ENST00000533704 TBC1D30Q9Y2I9 924 aa10.71□□□□□ -0.69
CAPN1-225ENST00000533704 OR51B4Q9Y5P0 310 aa10.71□□□□□ -0.69
CAPN1-225ENST00000533704 TBC1D3DA0A087WVF3 549 aa10.7□□□□□ -0.7
CAPN1-225ENST00000533704 TBC1D3IA0A087WXS9 549 aa10.7□□□□□ -0.7
CAPN1-225ENST00000533704 TBC1D3EA0A087X179 549 aa10.7□□□□□ -0.7
CAPN1-225ENST00000533704 TBC1D3KA0A087X1G2 549 aa10.7□□□□□ -0.7
CAPN1-225ENST00000533704 A0A0D9SEW6 157 aa10.7□□□□□ -0.7
CAPN1-225ENST00000533704 TBC1D3FA6NER0 549 aaPredicted RBP10.7□□□□□ -0.7
CAPN1-225ENST00000533704 C2CD4BA6NLJ0 364 aa10.7□□□□□ -0.7
CAPN1-225ENST00000533704 DRGXA6NNA5 263 aa10.7□□□□□ -0.7
CAPN1-225ENST00000533704 SMTNL1A8MU46 457 aa10.7□□□□□ -0.7
CAPN1-225ENST00000533704 TBC1D3LB9A6J9 549 aa10.7□□□□□ -0.7
CAPN1-225ENST00000533704 C1QTNF3-AMACRE9PGA6 284 aa10.7□□□□□ -0.7
CAPN1-225ENST00000533704 K7ERQ8 282 aa10.7□□□□□ -0.7
CAPN1-225ENST00000533704 CBX4O00257 560 aa10.7□□□□□ -0.7
CAPN1-225ENST00000533704 ATP9BO43861 1147 aa10.7□□□□□ -0.7
CAPN1-225ENST00000533704 RTN2O75298 545 aa10.7□□□□□ -0.7
CAPN1-225ENST00000533704 ENDOD1O94919 500 aa10.7□□□□□ -0.7
CAPN1-225ENST00000533704 TOP3BO95985 862 aaKnown RBP10.7□□□□□ -0.7
CAPN1-225ENST00000533704 CALB1P05937 261 aa10.7□□□□□ -0.7
CAPN1-225ENST00000533704 IGHV4-34P06331 123 aa10.7□□□□□ -0.7
CAPN1-225ENST00000533704 TBC1D3HP0C7X1 549 aa10.7□□□□□ -0.7
CAPN1-225ENST00000533704 KRT3P12035 628 aa10.7□□□□□ -0.7
CAPN1-225ENST00000533704 SRCP12931 536 aa10.7□□□□□ -0.7
CAPN1-225ENST00000533704 UNGP13051 313 aaPredicted RBP10.7□□□□□ -0.7
CAPN1-225ENST00000533704 GPD1P21695 349 aa10.7□□□□□ -0.7
CAPN1-225ENST00000533704 GLDCP23378 1020 aa10.7□□□□□ -0.7
CAPN1-225ENST00000533704 RRM1P23921 792 aa10.7□□□□□ -0.7
CAPN1-225ENST00000533704 ADPRHP54922 357 aa10.7□□□□□ -0.7
CAPN1-225ENST00000533704 C21orf59P57076 290 aa10.7□□□□□ -0.7
CAPN1-225ENST00000533704 FAM193AP78312 1265 aa10.7□□□□□ -0.7
CAPN1-225ENST00000533704 ARL13BQ3SXY8 428 aa10.7□□□□□ -0.7
CAPN1-225ENST00000533704 CCDC14Q49A88 953 aa10.7□□□□□ -0.7
CAPN1-225ENST00000533704 FILIP1LQ4L180 1135 aa10.7□□□□□ -0.7
CAPN1-225ENST00000533704 FAM46CQ5VWP2 391 aa10.7□□□□□ -0.7
CAPN1-225ENST00000533704 TBC1D3GQ6DHY5 549 aa10.7□□□□□ -0.7
CAPN1-225ENST00000533704 TBC1D3CQ6IPX1 549 aa10.7□□□□□ -0.7
CAPN1-225ENST00000533704 RWDD4Q6NW29 188 aaKnown RBP10.7□□□□□ -0.7
CAPN1-225ENST00000533704 DNAJC24Q6P3W2 148 aa10.7□□□□□ -0.7
CAPN1-225ENST00000533704 IL27RAQ6UWB1 636 aa10.7□□□□□ -0.7
CAPN1-225ENST00000533704 APTXQ7Z2E3 356 aaKnown RBP10.7□□□□□ -0.7
CAPN1-225ENST00000533704 NAXDQ8IW45 347 aa10.7□□□□□ -0.7
CAPN1-225ENST00000533704 ZNF683Q8IZ20 524 aa10.7□□□□□ -0.7
CAPN1-225ENST00000533704 TBC1D3Q8IZP1 549 aaPredicted RBP10.7□□□□□ -0.7
CAPN1-225ENST00000533704 OR2T34Q8NGX1 318 aa10.7□□□□□ -0.7
CAPN1-225ENST00000533704 PIP4K2CQ8TBX8 421 aa10.7□□□□□ -0.7
CAPN1-225ENST00000533704 FAM172AQ8WUF8 416 aa10.7□□□□□ -0.7
CAPN1-225ENST00000533704 C1orf74Q96LT6 269 aa10.7□□□□□ -0.7
CAPN1-225ENST00000533704 CCDC114Q96M63 670 aa10.7□□□□□ -0.7
CAPN1-225ENST00000533704 SLC6A18Q96N87 628 aa10.7□□□□□ -0.7
CAPN1-225ENST00000533704 HAPLN3Q96S86 360 aa10.7□□□□□ -0.7
CAPN1-225ENST00000533704 PSMB7Q99436 277 aa10.7□□□□□ -0.7
CAPN1-225ENST00000533704 ZYG11BQ9C0D3 744 aa10.7□□□□□ -0.7
CAPN1-225ENST00000533704 ATP13A1Q9HD20 1204 aa10.7□□□□□ -0.7
CAPN1-225ENST00000533704 TM7SF3Q9NS93 570 aa10.7□□□□□ -0.7
CAPN1-225ENST00000533704 TMEM51Q9NW97 253 aa10.7□□□□□ -0.7
CAPN1-225ENST00000533704 SARDHQ9UL12 918 aa10.7□□□□□ -0.7
CAPN1-225ENST00000533704 FZD4Q9ULV1 537 aa10.7□□□□□ -0.7
CAPN1-225ENST00000533704 ANKRD6Q9Y2G4 727 aa10.7□□□□□ -0.7
CAPN1-225ENST00000533704 FNDC3AQ9Y2H6 1198 aaKnown RBP10.7□□□□□ -0.7
CAPN1-225ENST00000533704 FARP1Q9Y4F1 1045 aaPredicted RBP10.7□□□□□ -0.7
CAPN1-225ENST00000533704 SNX11Q9Y5W9 270 aa10.7□□□□□ -0.7
CAPN1-225ENST00000533704 GOLGA4Q13439 2230 aaKnown RBP10.69□□□□□ -0.7
CAPN1-225ENST00000533704 IGLV3-10A0A075B6K4 115 aa10.69□□□□□ -0.7
CAPN1-225ENST00000533704 A0A1W2PPC4 97 aa10.69□□□□□ -0.7
CAPN1-225ENST00000533704 ANKRD62A6NC57 917 aa10.69□□□□□ -0.7
CAPN1-225ENST00000533704 LRRC10BA6NIK2 292 aa10.69□□□□□ -0.7
CAPN1-225ENST00000533704 TMCO5BA8MYB1 307 aa10.69□□□□□ -0.7
CAPN1-225ENST00000533704 UPK3BL1B0FP48 263 aa10.69□□□□□ -0.7
CAPN1-225ENST00000533704 UPK3BL2E5RIL1 263 aa10.69□□□□□ -0.7
CAPN1-225ENST00000533704 KPNA3O00505 521 aaPredicted RBP10.69□□□□□ -0.7
CAPN1-225ENST00000533704 SMAD6O43541 496 aaKnown RBP10.69□□□□□ -0.7
CAPN1-225ENST00000533704 GJB3O75712 270 aa10.69□□□□□ -0.7
CAPN1-225ENST00000533704 CCDC172P0C7W6 258 aa10.69□□□□□ -0.7
CAPN1-225ENST00000533704 C7P10643 843 aa10.69□□□□□ -0.7
CAPN1-225ENST00000533704 FERP16591 822 aa10.69□□□□□ -0.7
CAPN1-225ENST00000533704 MAT2AP31153 395 aaKnown RBP10.69□□□□□ -0.7
CAPN1-225ENST00000533704 RFC1P35251 1148 aaPredicted RBP10.69□□□□□ -0.7
CAPN1-225ENST00000533704 ADRA1BP35368 520 aa10.69□□□□□ -0.7
CAPN1-225ENST00000533704 RECQLP46063 649 aaPredicted RBP10.69□□□□□ -0.7
CAPN1-225ENST00000533704 GRIA4P48058 902 aa10.69□□□□□ -0.7
CAPN1-225ENST00000533704 ZNF165P49910 485 aa10.69□□□□□ -0.7
CAPN1-225ENST00000533704 DNA2P51530 1060 aa10.69□□□□□ -0.7
CAPN1-225ENST00000533704 PPP2CBP62714 309 aa10.69□□□□□ -0.7
CAPN1-225ENST00000533704 PPP2CAP67775 309 aa10.69□□□□□ -0.7
CAPN1-225ENST00000533704 IL9RQ01113 521 aa10.69□□□□□ -0.7
CAPN1-225ENST00000533704 CNTN1Q12860 1018 aa10.69□□□□□ -0.7
CAPN1-225ENST00000533704 PTP4A2Q12974 167 aa10.69□□□□□ -0.7
CAPN1-225ENST00000533704 SLC14A1Q13336 389 aa10.69□□□□□ -0.7
CAPN1-225ENST00000533704 TRIP6Q15654 476 aaKnown RBP10.69□□□□□ -0.7
CAPN1-225ENST00000533704 ACBD5Q5T8D3 534 aaPredicted RBP10.69□□□□□ -0.7
CAPN1-225ENST00000533704 SCYL2Q6P3W7 929 aa10.69□□□□□ -0.7
CAPN1-225ENST00000533704 WDR59Q6PJI9 974 aa10.69□□□□□ -0.7
CAPN1-225ENST00000533704 ARCQ7LC44 396 aa10.69□□□□□ -0.7
CAPN1-225ENST00000533704 SETD3Q86TU7 594 aaPredicted RBP10.69□□□□□ -0.7
CAPN1-225ENST00000533704 PHF13Q86YI8 300 aaPredicted RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms