RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 PAFAH1B3Q15102 231 aaKnown RBP18.93■□□□□ 0.62
SMPD1-208ENST00000533123 KRT71Q3SY84 523 aa18.93■□□□□ 0.62
SMPD1-208ENST00000533123 SLC45A4Q5BKX6 768 aa18.93■□□□□ 0.62
SMPD1-208ENST00000533123 NLRP14Q86W24 1093 aa18.93■□□□□ 0.62
SMPD1-208ENST00000533123 PPIL6Q8IXY8 311 aa18.93■□□□□ 0.62
SMPD1-208ENST00000533123 NAT8LQ8N9F0 302 aa18.93■□□□□ 0.62
SMPD1-208ENST00000533123 CCDC110Q8TBZ0 833 aa18.93■□□□□ 0.62
SMPD1-208ENST00000533123 BHMTQ93088 406 aa18.93■□□□□ 0.62
SMPD1-208ENST00000533123 RTP4Q96DX8 246 aa18.93■□□□□ 0.62
SMPD1-208ENST00000533123 QKIQ96PU8 341 aaKnown RBP eCLIP18.93■□□□□ 0.62
SMPD1-208ENST00000533123 LINC00597Q9H2U6 94 aa18.93■□□□□ 0.62
SMPD1-208ENST00000533123 CD207Q9UJ71 328 aa18.93■□□□□ 0.62
SMPD1-208ENST00000533123 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.93■□□□□ 0.62
SMPD1-208ENST00000533123 BANF1O75531 89 aa18.93■□□□□ 0.62
SMPD1-208ENST00000533123 RHOQP17081 205 aa18.93■□□□□ 0.62
SMPD1-208ENST00000533123 WEE1P30291 646 aa18.93■□□□□ 0.62
SMPD1-208ENST00000533123 GBP2P32456 591 aaPredicted RBP18.93■□□□□ 0.62
SMPD1-208ENST00000533123 USP4Q13107 963 aa18.93■□□□□ 0.62
SMPD1-208ENST00000533123 MTM1Q13496 603 aa18.93■□□□□ 0.62
SMPD1-208ENST00000533123 DNAJC21Q5F1R6 531 aaKnown RBP18.93■□□□□ 0.62
SMPD1-208ENST00000533123 RABGAP1LQ5R372 815 aa18.93■□□□□ 0.62
SMPD1-208ENST00000533123 CDKL3Q8IVW4 592 aaPredicted RBP18.93■□□□□ 0.62
SMPD1-208ENST00000533123 RTL3Q8N8U3 475 aaKnown RBP18.93■□□□□ 0.62
SMPD1-208ENST00000533123 P2RY11Q96G91 374 aa18.93■□□□□ 0.62
SMPD1-208ENST00000533123 CELF6Q96J87 481 aaKnown RBP18.93■□□□□ 0.62
SMPD1-208ENST00000533123 ATP6V1G3Q96LB4 118 aa18.93■□□□□ 0.62
SMPD1-208ENST00000533123 LGMNQ99538 433 aa18.93■□□□□ 0.62
SMPD1-208ENST00000533123 SAYSD1Q9NPB0 183 aa18.93■□□□□ 0.62
SMPD1-208ENST00000533123 USP15Q9Y4E8 981 aaPredicted RBP18.93■□□□□ 0.62
SMPD1-208ENST00000533123 NUP210Q8TEM1 1887 aaPredicted RBP18.93■□□□□ 0.62
SMPD1-208ENST00000533123 SMIM23A6NLE4 172 aa18.92■□□□□ 0.62
SMPD1-208ENST00000533123 TTC4O95801 387 aa18.92■□□□□ 0.62
SMPD1-208ENST00000533123 VAV1P15498 845 aa18.92■□□□□ 0.62
SMPD1-208ENST00000533123 XRCC4Q13426 336 aa18.92■□□□□ 0.62
SMPD1-208ENST00000533123 SKIDA1Q1XH10 827 aa18.92■□□□□ 0.62
SMPD1-208ENST00000533123 C5orf22Q49AR2 442 aa18.92■□□□□ 0.62
SMPD1-208ENST00000533123 FAXCQ5TGI0 409 aa18.92■□□□□ 0.62
SMPD1-208ENST00000533123 TPGS1Q6ZTW0 290 aa18.92■□□□□ 0.62
SMPD1-208ENST00000533123 FAM217AQ8IXS0 508 aa18.92■□□□□ 0.62
SMPD1-208ENST00000533123 KLC2Q9H0B6 622 aa18.92■□□□□ 0.62
SMPD1-208ENST00000533123 PRDM16Q9HAZ2 1276 aa18.92■□□□□ 0.62
SMPD1-208ENST00000533123 BCCIPQ9P287 314 aaKnown RBP eCLIP18.92■□□□□ 0.62
SMPD1-208ENST00000533123 MYOFQ9NZM1 2061 aa18.92■□□□□ 0.62
SMPD1-208ENST00000533123 COL6A3P12111 3177 aa18.92■□□□□ 0.62
SMPD1-208ENST00000533123 CFAP69A5D8W1 941 aa18.92■□□□□ 0.62
SMPD1-208ENST00000533123 SP100P23497 879 aaPredicted RBP18.92■□□□□ 0.62
SMPD1-208ENST00000533123 EIF3BP55884 814 aaKnown RBP18.92■□□□□ 0.62
SMPD1-208ENST00000533123 PCGF5Q86SE9 256 aa18.92■□□□□ 0.62
SMPD1-208ENST00000533123 TDRD5Q8NAT2 981 aaKnown RBP18.92■□□□□ 0.62
SMPD1-208ENST00000533123 EPS8L3Q8TE67 593 aaKnown RBP18.92■□□□□ 0.62
SMPD1-208ENST00000533123 TMA16Q96EY4 203 aaKnown RBP18.92■□□□□ 0.62
SMPD1-208ENST00000533123 UBE2ZQ9H832 354 aaPredicted RBP18.92■□□□□ 0.62
SMPD1-208ENST00000533123 KIF9Q9HAQ2 790 aa18.92■□□□□ 0.62
SMPD1-208ENST00000533123 TMEM248Q9NWD8 314 aa18.92■□□□□ 0.62
SMPD1-208ENST00000533123 ZNF212Q9UDV6 495 aa18.92■□□□□ 0.62
SMPD1-208ENST00000533123 WNT6Q9Y6F9 365 aa18.92■□□□□ 0.62
SMPD1-208ENST00000533123 GFRA2O00451 464 aa18.91■□□□□ 0.62
SMPD1-208ENST00000533123 TCF3P15923 654 aa18.91■□□□□ 0.62
SMPD1-208ENST00000533123 MAGEA4P43358 317 aa18.91■□□□□ 0.62
SMPD1-208ENST00000533123 TANGO2Q6ICL3 276 aa18.91■□□□□ 0.62
SMPD1-208ENST00000533123 FAM76AQ8TAV0 307 aa18.91■□□□□ 0.62
SMPD1-208ENST00000533123 PLK2Q9NYY3 685 aa18.91■□□□□ 0.62
SMPD1-208ENST00000533123 WASH4PA8MWX3 477 aa18.9■□□□□ 0.62
SMPD1-208ENST00000533123 TBL1XO60907 577 aa18.9■□□□□ 0.62
SMPD1-208ENST00000533123 LAMP2P13473 410 aa18.9■□□□□ 0.62
SMPD1-208ENST00000533123 FCARP24071 287 aa18.9■□□□□ 0.62
SMPD1-208ENST00000533123 OR1E1P30953 314 aa18.9■□□□□ 0.62
SMPD1-208ENST00000533123 SERPINB6P35237 376 aa18.9■□□□□ 0.62
SMPD1-208ENST00000533123 ACTN2P35609 894 aa18.9■□□□□ 0.62
SMPD1-208ENST00000533123 SLCO1A2P46721 670 aa18.9■□□□□ 0.62
SMPD1-208ENST00000533123 MSS51Q4VC12 460 aa18.9■□□□□ 0.62
SMPD1-208ENST00000533123 FNBP1LQ5T0N5 605 aa18.9■□□□□ 0.62
SMPD1-208ENST00000533123 RELL1Q8IUW5 271 aa18.9■□□□□ 0.62
SMPD1-208ENST00000533123 CPXM2Q8N436 756 aa18.9■□□□□ 0.62
SMPD1-208ENST00000533123 TFB1MQ8WVM0 346 aaKnown RBP18.9■□□□□ 0.62
SMPD1-208ENST00000533123 SUSD6Q92537 303 aa18.9■□□□□ 0.62
SMPD1-208ENST00000533123 FOXP3Q9BZS1 431 aa18.9■□□□□ 0.62
SMPD1-208ENST00000533123 RAB6BQ9NRW1 208 aa18.9■□□□□ 0.62
SMPD1-208ENST00000533123 PAK5Q9P286 719 aa18.9■□□□□ 0.62
SMPD1-208ENST00000533123 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.9■□□□□ 0.62
SMPD1-208ENST00000533123 TLDC2A0PJX2 215 aa18.9■□□□□ 0.62
SMPD1-208ENST00000533123 HEPACAM2A8MVW5 462 aa18.9■□□□□ 0.62
SMPD1-208ENST00000533123 HIF1AQ16665 826 aa18.9■□□□□ 0.62
SMPD1-208ENST00000533123 HOOK3Q86VS8 718 aa18.9■□□□□ 0.62
SMPD1-208ENST00000533123 CCDC13Q8IYE1 715 aa18.9■□□□□ 0.62
SMPD1-208ENST00000533123 ZBED8Q8IZ13 594 aa18.9■□□□□ 0.62
SMPD1-208ENST00000533123 BPIFB1Q8TDL5 484 aa18.9■□□□□ 0.62
SMPD1-208ENST00000533123 DDI1Q8WTU0 396 aa18.9■□□□□ 0.62
SMPD1-208ENST00000533123 NECTIN4Q96NY8 510 aa18.9■□□□□ 0.62
SMPD1-208ENST00000533123 TRPV4Q9HBA0 871 aa18.9■□□□□ 0.62
SMPD1-208ENST00000533123 ZFP14Q9HCL3 533 aa18.9■□□□□ 0.62
SMPD1-208ENST00000533123 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.9■□□□□ 0.62
SMPD1-208ENST00000533123 GRXCR2A6NFK2 248 aa18.89■□□□□ 0.61
SMPD1-208ENST00000533123 NUMBP49757 651 aa18.89■□□□□ 0.61
SMPD1-208ENST00000533123 CDH4P55283 916 aa18.89■□□□□ 0.61
SMPD1-208ENST00000533123 PDIA2Q13087 525 aaKnown RBP18.89■□□□□ 0.61
SMPD1-208ENST00000533123 KCNJ11Q14654 390 aa18.89■□□□□ 0.61
SMPD1-208ENST00000533123 HEATR6Q6AI08 1181 aaKnown RBP18.89■□□□□ 0.61
SMPD1-208ENST00000533123 TMEM25Q86YD3 366 aa18.89■□□□□ 0.61
SMPD1-208ENST00000533123 ARHGAP12Q8IWW6 846 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms