RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 IPO11Q9UI26 975 aaKnown RBP13.4□□□□□ -0.26
COPB1-209ENST00000533096 VPS28Q9UK41 221 aa13.4□□□□□ -0.26
COPB1-209ENST00000533096 BPTFQ12830 3046 aa13.4□□□□□ -0.26
COPB1-209ENST00000533096 SETXQ7Z333 2677 aaKnown RBP13.39□□□□□ -0.27
COPB1-209ENST00000533096 TRIM49BA6NDI0 452 aa13.39□□□□□ -0.27
COPB1-209ENST00000533096 NEMP2A6NFY4 417 aa13.39□□□□□ -0.27
COPB1-209ENST00000533096 ENDOD1O94919 500 aa13.39□□□□□ -0.27
COPB1-209ENST00000533096 MT-CO1P00395 513 aa13.39□□□□□ -0.27
COPB1-209ENST00000533096 CKMT1AP12532 417 aa13.39□□□□□ -0.27
COPB1-209ENST00000533096 GPD2P43304 727 aa13.39□□□□□ -0.27
COPB1-209ENST00000533096 FMO5P49326 533 aa13.39□□□□□ -0.27
COPB1-209ENST00000533096 DUSP3P51452 185 aaPredicted RBP13.39□□□□□ -0.27
COPB1-209ENST00000533096 UCNP55089 124 aa13.39□□□□□ -0.27
COPB1-209ENST00000533096 TAS2R38P59533 333 aa13.39□□□□□ -0.27
COPB1-209ENST00000533096 YWHAZP63104 245 aaKnown RBP13.39□□□□□ -0.27
COPB1-209ENST00000533096 KRT85P78386 507 aa13.39□□□□□ -0.27
COPB1-209ENST00000533096 CENPCQ03188 943 aa13.39□□□□□ -0.27
COPB1-209ENST00000533096 VAC14Q08AM6 782 aa13.39□□□□□ -0.27
COPB1-209ENST00000533096 STILQ15468 1287 aa13.39□□□□□ -0.27
COPB1-209ENST00000533096 CDKN3Q16667 212 aa13.39□□□□□ -0.27
COPB1-209ENST00000533096 CCDC40Q4G0X9 1142 aa13.39□□□□□ -0.27
COPB1-209ENST00000533096 C3orf38Q5JPI3 329 aa13.39□□□□□ -0.27
COPB1-209ENST00000533096 RABGAP1LQ5R372 815 aa13.39□□□□□ -0.27
COPB1-209ENST00000533096 CDCP2Q5VXM1 449 aa13.39□□□□□ -0.27
COPB1-209ENST00000533096 KIAA1614Q5VZ46 1190 aa13.39□□□□□ -0.27
COPB1-209ENST00000533096 OR6B2Q6IFH4 312 aa13.39□□□□□ -0.27
COPB1-209ENST00000533096 FBXL22Q6P050 247 aa13.39□□□□□ -0.27
COPB1-209ENST00000533096 Q6ZSR6 202 aa13.39□□□□□ -0.27
COPB1-209ENST00000533096 ATP11CQ8NB49 1132 aa13.39□□□□□ -0.27
COPB1-209ENST00000533096 OR52K2Q8NGK3 314 aa13.39□□□□□ -0.27
COPB1-209ENST00000533096 ERCC4Q92889 916 aaPredicted RBP13.39□□□□□ -0.27
COPB1-209ENST00000533096 SLC35C1Q96A29 364 aa13.39□□□□□ -0.27
COPB1-209ENST00000533096 HIC2Q96JB3 615 aa13.39□□□□□ -0.27
COPB1-209ENST00000533096 PPP1R9BQ96SB3 815 aa13.39□□□□□ -0.27
COPB1-209ENST00000533096 GTPBP4Q9BZE4 634 aaKnown RBP13.39□□□□□ -0.27
COPB1-209ENST00000533096 SIK2Q9H0K1 926 aa13.39□□□□□ -0.27
COPB1-209ENST00000533096 MUC3BQ9H195 1237 aa13.39□□□□□ -0.27
COPB1-209ENST00000533096 DYRK4Q9NR20 520 aa13.39□□□□□ -0.27
COPB1-209ENST00000533096 VANGL2Q9ULK5 521 aa13.39□□□□□ -0.27
COPB1-209ENST00000533096 SATB2Q9UPW6 733 aa13.39□□□□□ -0.27
COPB1-209ENST00000533096 FARP1Q9Y4F1 1045 aaPredicted RBP13.39□□□□□ -0.27
COPB1-209ENST00000533096 MYH10P35580 1976 aa13.39□□□□□ -0.27
COPB1-209ENST00000533096 CABIN1Q9Y6J0 2220 aa13.38□□□□□ -0.27
COPB1-209ENST00000533096 K7ERQ8 282 aa13.38□□□□□ -0.27
COPB1-209ENST00000533096 K7ESM1 405 aa13.38□□□□□ -0.27
COPB1-209ENST00000533096 SLC16A3O15427 465 aaKnown RBP13.38□□□□□ -0.27
COPB1-209ENST00000533096 SART1O43290 800 aaKnown RBP13.38□□□□□ -0.27
COPB1-209ENST00000533096 ATP9BO43861 1147 aa13.38□□□□□ -0.27
COPB1-209ENST00000533096 SLC28A2O43868 658 aa13.38□□□□□ -0.27
COPB1-209ENST00000533096 GRAP2O75791 330 aa13.38□□□□□ -0.27
COPB1-209ENST00000533096 PIAS2O75928 621 aa13.38□□□□□ -0.27
COPB1-209ENST00000533096 LETM1O95202 739 aaPredicted RBP13.38□□□□□ -0.27
COPB1-209ENST00000533096 PAK4O96013 591 aaPredicted RBP13.38□□□□□ -0.27
COPB1-209ENST00000533096 CHRNA3P32297 505 aa13.38□□□□□ -0.27
COPB1-209ENST00000533096 GGCXP38435 758 aa13.38□□□□□ -0.27
COPB1-209ENST00000533096 ACADSBP45954 432 aa13.38□□□□□ -0.27
COPB1-209ENST00000533096 IRAK1P51617 712 aa13.38□□□□□ -0.27
COPB1-209ENST00000533096 PLK1P53350 603 aa13.38□□□□□ -0.27
COPB1-209ENST00000533096 OXCT1P55809 520 aa13.38□□□□□ -0.27
COPB1-209ENST00000533096 CDK17Q00537 523 aa13.38□□□□□ -0.27
COPB1-209ENST00000533096 CETN1Q12798 172 aa13.38□□□□□ -0.27
COPB1-209ENST00000533096 NME3Q13232 169 aa13.38□□□□□ -0.27
COPB1-209ENST00000533096 NNTQ13423 1086 aa13.38□□□□□ -0.27
COPB1-209ENST00000533096 ZNF284Q2VY69 593 aa13.38□□□□□ -0.27
COPB1-209ENST00000533096 ARSIQ5FYB1 569 aa13.38□□□□□ -0.27
COPB1-209ENST00000533096 CXorf57Q6NSI4 855 aaKnown RBP13.38□□□□□ -0.27
COPB1-209ENST00000533096 ARHGEF19Q8IW93 802 aa13.38□□□□□ -0.27
COPB1-209ENST00000533096 IFI44Q8TCB0 444 aa13.38□□□□□ -0.27
COPB1-209ENST00000533096 SNX21Q969T3 373 aa13.38□□□□□ -0.27
COPB1-209ENST00000533096 ARRDC3Q96B67 414 aa13.38□□□□□ -0.27
COPB1-209ENST00000533096 ALG14Q96F25 216 aa13.38□□□□□ -0.27
COPB1-209ENST00000533096 ATXN7L3BQ96GX2 97 aa13.38□□□□□ -0.27
COPB1-209ENST00000533096 MED15Q96RN5 788 aa13.38□□□□□ -0.27
COPB1-209ENST00000533096 PRMT1Q99873 361 aaKnown RBP13.38□□□□□ -0.27
COPB1-209ENST00000533096 CLMPQ9H6B4 373 aa13.38□□□□□ -0.27
COPB1-209ENST00000533096 POPDC2Q9HBU9 364 aa13.38□□□□□ -0.27
COPB1-209ENST00000533096 PREBQ9HCU5 417 aa13.38□□□□□ -0.27
COPB1-209ENST00000533096 THSD1Q9NS62 852 aa13.38□□□□□ -0.27
COPB1-209ENST00000533096 RMND1Q9NWS8 449 aa13.38□□□□□ -0.27
COPB1-209ENST00000533096 DDIT4Q9NX09 232 aa13.38□□□□□ -0.27
COPB1-209ENST00000533096 SMG1Q96Q15 3661 aaKnown RBP13.37□□□□□ -0.27
COPB1-209ENST00000533096 E5RJQ4 531 aa13.37□□□□□ -0.27
COPB1-209ENST00000533096 RNF103O00237 685 aa13.37□□□□□ -0.27
COPB1-209ENST00000533096 SCAMP1O15126 338 aa13.37□□□□□ -0.27
COPB1-209ENST00000533096 GIMD1P0DJR0 217 aa13.37□□□□□ -0.27
COPB1-209ENST00000533096 C6P13671 934 aa13.37□□□□□ -0.27
COPB1-209ENST00000533096 TGM2P21980 687 aa13.37□□□□□ -0.27
COPB1-209ENST00000533096 HNRNPA2B1P22626 353 aaKnown RBP13.37□□□□□ -0.27
COPB1-209ENST00000533096 CCR1P32246 355 aa13.37□□□□□ -0.27
COPB1-209ENST00000533096 DNA2P51530 1060 aa13.37□□□□□ -0.27
COPB1-209ENST00000533096 ERVPABLB-1P60509 514 aa13.37□□□□□ -0.27
COPB1-209ENST00000533096 CCDC15Q0P6D6 951 aa13.37□□□□□ -0.27
COPB1-209ENST00000533096 AUHQ13825 339 aaKnown RBP13.37□□□□□ -0.27
COPB1-209ENST00000533096 ISXQ2M1V0 245 aa13.37□□□□□ -0.27
COPB1-209ENST00000533096 SEL1L3Q68CR1 1132 aa13.37□□□□□ -0.27
COPB1-209ENST00000533096 PTAR1Q7Z6K3 402 aaPredicted RBP13.37□□□□□ -0.27
COPB1-209ENST00000533096 C14orf80Q86SX3 495 aa13.37□□□□□ -0.27
COPB1-209ENST00000533096 HORMAD1Q86X24 394 aa13.37□□□□□ -0.27
COPB1-209ENST00000533096 DEFB106AQ8N104 65 aa13.37□□□□□ -0.27
COPB1-209ENST00000533096 SH2D3CQ8N5H7 860 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms