RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 INTUQ9ULD6 942 aa14.28□□□□□ -0.12
TSPAN4-220ENST00000532375 CXorf51AA0A1B0GTR3 108 aa14.27□□□□□ -0.13
TSPAN4-220ENST00000532375 MYO1FO00160 1098 aa14.27□□□□□ -0.13
TSPAN4-220ENST00000532375 CREB3O43889 395 aa14.27□□□□□ -0.13
TSPAN4-220ENST00000532375 PRPSAP2O60256 369 aa14.27□□□□□ -0.13
TSPAN4-220ENST00000532375 PROSCO94903 275 aa14.27□□□□□ -0.13
TSPAN4-220ENST00000532375 IL4RP24394 825 aa14.27□□□□□ -0.13
TSPAN4-220ENST00000532375 HTR7P34969 479 aa14.27□□□□□ -0.13
TSPAN4-220ENST00000532375 HCAR3P49019 387 aa14.27□□□□□ -0.13
TSPAN4-220ENST00000532375 TPMTP51580 245 aa14.27□□□□□ -0.13
TSPAN4-220ENST00000532375 ARSEP51690 589 aa14.27□□□□□ -0.13
TSPAN4-220ENST00000532375 ST8SIA6P61647 398 aa14.27□□□□□ -0.13
TSPAN4-220ENST00000532375 DPYSL2Q16555 572 aa14.27□□□□□ -0.13
TSPAN4-220ENST00000532375 KCNT1Q5JUK3 1230 aa14.27□□□□□ -0.13
TSPAN4-220ENST00000532375 PMS2CLQ68D20 193 aa14.27□□□□□ -0.13
TSPAN4-220ENST00000532375 LAIR1Q6GTX8 287 aa14.27□□□□□ -0.13
TSPAN4-220ENST00000532375 CEP68Q76N32 757 aa14.27□□□□□ -0.13
TSPAN4-220ENST00000532375 CCDC170Q8IYT3 715 aa14.27□□□□□ -0.13
TSPAN4-220ENST00000532375 UMODL1-AS1Q8N2C9 162 aa14.27□□□□□ -0.13
TSPAN4-220ENST00000532375 CTNNBL1Q8WYA6 563 aaPredicted RBP14.27□□□□□ -0.13
TSPAN4-220ENST00000532375 TSC1Q92574 1164 aa14.27□□□□□ -0.13
TSPAN4-220ENST00000532375 SIPA1Q96FS4 1042 aa14.27□□□□□ -0.13
TSPAN4-220ENST00000532375 EPAS1Q99814 870 aa14.27□□□□□ -0.13
TSPAN4-220ENST00000532375 C2orf49Q9BVC5 232 aaPredicted RBP14.27□□□□□ -0.13
TSPAN4-220ENST00000532375 MAGEH1Q9H213 219 aa14.27□□□□□ -0.13
TSPAN4-220ENST00000532375 CWC15Q9P013 229 aaKnown RBP14.27□□□□□ -0.13
TSPAN4-220ENST00000532375 CTTNBP2NLQ9P2B4 639 aa14.27□□□□□ -0.13
TSPAN4-220ENST00000532375 ACTL7AQ9Y615 435 aa14.27□□□□□ -0.13
TSPAN4-220ENST00000532375 PI4KAP42356 2102 aa14.26□□□□□ -0.13
TSPAN4-220ENST00000532375 EDDM13A0A1B0GTR0 161 aa14.26□□□□□ -0.13
TSPAN4-220ENST00000532375 C10orf142B7Z368 130 aa14.26□□□□□ -0.13
TSPAN4-220ENST00000532375 ZNF217O75362 1048 aa14.26□□□□□ -0.13
TSPAN4-220ENST00000532375 GOT1P17174 413 aa14.26□□□□□ -0.13
TSPAN4-220ENST00000532375 TAS2R40P59535 323 aa14.26□□□□□ -0.13
TSPAN4-220ENST00000532375 KRT83P78385 493 aa14.26□□□□□ -0.13
TSPAN4-220ENST00000532375 DPYSQ14117 519 aa14.26□□□□□ -0.13
TSPAN4-220ENST00000532375 DLG2Q15700 870 aa14.26□□□□□ -0.13
TSPAN4-220ENST00000532375 ATP13A4Q4VNC1 1196 aa14.26□□□□□ -0.13
TSPAN4-220ENST00000532375 AFMIDQ63HM1 303 aa14.26□□□□□ -0.13
TSPAN4-220ENST00000532375 LINGO4Q6UY18 593 aa14.26□□□□□ -0.13
TSPAN4-220ENST00000532375 RAD9BQ6WBX8 426 aa14.26□□□□□ -0.13
TSPAN4-220ENST00000532375 POLNQ7Z5Q5 900 aa14.26□□□□□ -0.13
TSPAN4-220ENST00000532375 STK40Q8N2I9 435 aa14.26□□□□□ -0.13
TSPAN4-220ENST00000532375 TEKT4Q8WW24 435 aa14.26□□□□□ -0.13
TSPAN4-220ENST00000532375 RUBCNQ92622 972 aa14.26□□□□□ -0.13
TSPAN4-220ENST00000532375 PRCCQ92733 491 aaPredicted RBP14.26□□□□□ -0.13
TSPAN4-220ENST00000532375 LOXL4Q96JB6 756 aa14.26□□□□□ -0.13
TSPAN4-220ENST00000532375 SPON2Q9BUD6 331 aa14.26□□□□□ -0.13
TSPAN4-220ENST00000532375 LRRC19Q9H756 370 aa14.26□□□□□ -0.13
TSPAN4-220ENST00000532375 FBRSQ9HAH7 460 aa14.26□□□□□ -0.13
TSPAN4-220ENST00000532375 PARD6AQ9NPB6 346 aa14.26□□□□□ -0.13
TSPAN4-220ENST00000532375 WSB2Q9NYS7 404 aaPredicted RBP14.26□□□□□ -0.13
TSPAN4-220ENST00000532375 CYP8B1Q9UNU6 501 aa14.26□□□□□ -0.13
TSPAN4-220ENST00000532375 TFR2Q9UP52 801 aa14.26□□□□□ -0.13
TSPAN4-220ENST00000532375 REXO2Q9Y3B8 237 aaKnown RBP14.26□□□□□ -0.13
TSPAN4-220ENST00000532375 EPN1Q9Y6I3 576 aaPredicted RBP14.26□□□□□ -0.13
TSPAN4-220ENST00000532375 RCCD1A6NED2 376 aa14.25□□□□□ -0.13
TSPAN4-220ENST00000532375 SOWAHDA6NJG2 315 aa14.25□□□□□ -0.13
TSPAN4-220ENST00000532375 RNF103O00237 685 aa14.25□□□□□ -0.13
TSPAN4-220ENST00000532375 FGF10O15520 208 aaPredicted RBP14.25□□□□□ -0.13
TSPAN4-220ENST00000532375 KDELR3O43731 214 aa14.25□□□□□ -0.13
TSPAN4-220ENST00000532375 RAMP2O60895 175 aa14.25□□□□□ -0.13
TSPAN4-220ENST00000532375 RETP07949 1114 aa14.25□□□□□ -0.13
TSPAN4-220ENST00000532375 DESP17661 470 aa14.25□□□□□ -0.13
TSPAN4-220ENST00000532375 ERCC2P18074 760 aa14.25□□□□□ -0.13
TSPAN4-220ENST00000532375 MAN1A1P33908 653 aa14.25□□□□□ -0.13
TSPAN4-220ENST00000532375 MAGEA1P43355 309 aa14.25□□□□□ -0.13
TSPAN4-220ENST00000532375 YBEYP58557 167 aaPredicted RBP14.25□□□□□ -0.13
TSPAN4-220ENST00000532375 TPI1P60174 286 aa14.25□□□□□ -0.13
TSPAN4-220ENST00000532375 SLC20A2Q08357 652 aa14.25□□□□□ -0.13
TSPAN4-220ENST00000532375 BYSLQ13895 437 aaKnown RBP14.25□□□□□ -0.13
TSPAN4-220ENST00000532375 SMTNL2Q2TAL5 461 aa14.25□□□□□ -0.13
TSPAN4-220ENST00000532375 KIAA1324Q6UXG2 1013 aaKnown RBP14.25□□□□□ -0.13
TSPAN4-220ENST00000532375 RFX8Q6ZV50 586 aa14.25□□□□□ -0.13
TSPAN4-220ENST00000532375 C11orf74Q86VG3 221 aa14.25□□□□□ -0.13
TSPAN4-220ENST00000532375 TMTC1Q8IUR5 882 aa14.25□□□□□ -0.13
TSPAN4-220ENST00000532375 ARHGAP12Q8IWW6 846 aa14.25□□□□□ -0.13
TSPAN4-220ENST00000532375 RFFLQ8WZ73 363 aa14.25□□□□□ -0.13
TSPAN4-220ENST00000532375 CATSPERBQ9H7T0 1116 aa14.25□□□□□ -0.13
TSPAN4-220ENST00000532375 ZWILCHQ9H900 591 aa14.25□□□□□ -0.13
TSPAN4-220ENST00000532375 PCDH18Q9HCL0 1135 aa14.25□□□□□ -0.13
TSPAN4-220ENST00000532375 ATP13A1Q9HD20 1204 aa14.25□□□□□ -0.13
TSPAN4-220ENST00000532375 ETNK2Q9NVF9 386 aa14.25□□□□□ -0.13
TSPAN4-220ENST00000532375 IMPACTQ9P2X3 320 aa14.25□□□□□ -0.13
TSPAN4-220ENST00000532375 SLC25A13Q9UJS0 675 aa14.25□□□□□ -0.13
TSPAN4-220ENST00000532375 SARDHQ9UL12 918 aa14.25□□□□□ -0.13
TSPAN4-220ENST00000532375 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.24□□□□□ -0.13
TSPAN4-220ENST00000532375 RASA4BC9J798 803 aa14.24□□□□□ -0.13
TSPAN4-220ENST00000532375 CBX4O00257 560 aa14.24□□□□□ -0.13
TSPAN4-220ENST00000532375 EEF2KO00418 725 aaKnown RBP14.24□□□□□ -0.13
TSPAN4-220ENST00000532375 MCF2LO15068 1137 aa14.24□□□□□ -0.13
TSPAN4-220ENST00000532375 RASA4O43374 803 aa14.24□□□□□ -0.13
TSPAN4-220ENST00000532375 EPN2O95208 641 aa14.24□□□□□ -0.13
TSPAN4-220ENST00000532375 NDUFA10O95299 355 aa14.24□□□□□ -0.13
TSPAN4-220ENST00000532375 CD48P09326 243 aa14.24□□□□□ -0.13
TSPAN4-220ENST00000532375 NNMTP40261 264 aa14.24□□□□□ -0.13
TSPAN4-220ENST00000532375 PTGER3P43115 390 aa14.24□□□□□ -0.13
TSPAN4-220ENST00000532375 CLCN6P51797 869 aa14.24□□□□□ -0.13
TSPAN4-220ENST00000532375 ZNF135P52742 658 aaPredicted RBP14.24□□□□□ -0.13
TSPAN4-220ENST00000532375 METAP1P53582 386 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms