RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 RPP40O75818 363 aaKnown RBP5.39□□□□□ -1.55
ECHDC1-222ENST00000531967 AKAP3O75969 853 aa5.39□□□□□ -1.55
ECHDC1-222ENST00000531967 KRT34O76011 436 aa5.39□□□□□ -1.55
ECHDC1-222ENST00000531967 AK1P00568 194 aa5.39□□□□□ -1.55
ECHDC1-222ENST00000531967 VIPP01282 170 aa5.39□□□□□ -1.55
ECHDC1-222ENST00000531967 GNAI2P04899 355 aa5.39□□□□□ -1.55
ECHDC1-222ENST00000531967 GSTM1P09488 218 aa5.39□□□□□ -1.55
ECHDC1-222ENST00000531967 BMP8BP34820 402 aa5.39□□□□□ -1.55
ECHDC1-222ENST00000531967 GPD2P43304 727 aa5.39□□□□□ -1.55
ECHDC1-222ENST00000531967 GPR15P49685 360 aa5.39□□□□□ -1.55
ECHDC1-222ENST00000531967 CDK7P50613 346 aa5.39□□□□□ -1.55
ECHDC1-222ENST00000531967 PDE1AP54750 535 aa5.39□□□□□ -1.55
ECHDC1-222ENST00000531967 OLR1P78380 273 aa5.39□□□□□ -1.55
ECHDC1-222ENST00000531967 PRRT3Q5FWE3 981 aa5.39□□□□□ -1.55
ECHDC1-222ENST00000531967 ADGRF1Q5T601 910 aa5.39□□□□□ -1.55
ECHDC1-222ENST00000531967 CORO6Q6QEF8 472 aa5.39□□□□□ -1.55
ECHDC1-222ENST00000531967 FAM180AQ6UWF9 173 aa5.39□□□□□ -1.55
ECHDC1-222ENST00000531967 VASH2Q86V25 355 aa5.39□□□□□ -1.55
ECHDC1-222ENST00000531967 KIF27Q86VH2 1401 aa5.39□□□□□ -1.55
ECHDC1-222ENST00000531967 KLHL7Q8IXQ5 586 aa5.39□□□□□ -1.55
ECHDC1-222ENST00000531967 Q8N1Y9 231 aa5.39□□□□□ -1.55
ECHDC1-222ENST00000531967 MINDY1Q8N5J2 469 aa5.39□□□□□ -1.55
ECHDC1-222ENST00000531967 NHLRC2Q8NBF2 726 aa5.39□□□□□ -1.55
ECHDC1-222ENST00000531967 GRAMD1AQ96CP6 724 aa5.39□□□□□ -1.55
ECHDC1-222ENST00000531967 TTC25Q96NG3 672 aa5.39□□□□□ -1.55
ECHDC1-222ENST00000531967 SEMA3CQ99985 751 aa5.39□□□□□ -1.55
ECHDC1-222ENST00000531967 CCSER1Q9C0I3 900 aa5.39□□□□□ -1.55
ECHDC1-222ENST00000531967 SLC6A20Q9NP91 592 aa5.39□□□□□ -1.55
ECHDC1-222ENST00000531967 WSB2Q9NYS7 404 aaPredicted RBP5.39□□□□□ -1.55
ECHDC1-222ENST00000531967 GABRQQ9UN88 632 aa5.39□□□□□ -1.55
ECHDC1-222ENST00000531967 RUVBL1Q9Y265 456 aaKnown RBP5.39□□□□□ -1.55
ECHDC1-222ENST00000531967 STRAPQ9Y3F4 350 aaKnown RBP5.39□□□□□ -1.55
ECHDC1-222ENST00000531967 KIAA1217Q5T5P2 1943 aa5.39□□□□□ -1.55
ECHDC1-222ENST00000531967 RAD50Q92878 1312 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 TCRBV21S2A2A0A5A6 115 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 KIF28PB7ZC32 967 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 SEPT4O43236 478 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 PROCP04070 461 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 ARP10275 920 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 ZNF3P17036 446 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 EPORP19235 508 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 CHRM3P20309 590 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 NR2F2P24468 414 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 LONP1P36776 959 aaKnown RBP5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 SLC11A2P49281 568 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 UFM1P61960 85 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 UBE2HP62256 183 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 YBX1P67809 324 aaKnown RBP5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 CAP1Q01518 475 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 GFPT1Q06210 699 aaPredicted RBP5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 TNK2Q07912 1038 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 GOLGA8DPQ0D2H9 430 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 KARSQ15046 597 aaKnown RBP5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 RRS1Q15050 365 aaKnown RBP5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 LRIT3Q3SXY7 679 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 MCMDC2Q4G0Z9 681 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 SLC9B1Q4ZJI4 515 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 LRRC24Q50LG9 513 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 ARHGAP17Q68EM7 881 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 ZDHHC24Q6UX98 284 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 C1orf186Q6ZWK4 172 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 TRIM74Q86UV6 250 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 TRIM73Q86UV7 250 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 ZNF679Q8IYX0 411 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 SHCBP1Q8NEM2 672 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 OR8K5Q8NH50 307 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 CHURC1Q8WUH1 139 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 NCLNQ969V3 563 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 SPATA13Q96N96 652 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 GAD1Q99259 594 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 RAD9AQ99638 391 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 NUP85Q9BW27 656 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 HAUS4Q9H6D7 363 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 NRDE2Q9H7Z3 1164 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 UNKLQ9H9P5 680 aaKnown RBP5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 ZBTB26Q9HCK0 441 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 HCN3Q9P1Z3 774 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 ATP6V1HQ9UI12 483 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 NENFQ9UMX5 172 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 SNX6Q9UNH7 406 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 CARD8Q9Y2G2 431 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 TDRKHQ9Y2W6 561 aaKnown RBP5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 LIPGQ9Y5X9 500 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 ARAP1Q96P48 1450 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 MYBBP1AQ9BQG0 1328 aaKnown RBP5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 VIRMAQ69YN4 1812 aaKnown RBP5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 A0A1B0GWJ7 208 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 SH2D7A6NKC9 451 aaPredicted RBP5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 ADAMDEC1O15204 470 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 RASAL1O95294 804 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 MT-ATP6P00846 226 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 UBTFL6P0CB48 400 aaPredicted RBP5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 PRKAR1BP31321 381 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 SLC5A2P31639 672 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 CCT6AP40227 531 aaKnown RBP5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 FASLGP48023 281 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 CCR3P51677 355 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 SNU13P55769 128 aaKnown RBP5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 NPEPPSP55786 919 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms